physioex 1.0.0.dev1__tar.gz → 1.0.0.dev2__tar.gz

{physioex-1.0.0.dev1 → physioex-1.0.0.dev2}/PKG-INFO

@@ -1,15 +1,36 @@
 Metadata-Version: 2.1
 Name: physioex
-Version: 1.0.0.dev1
+Version: 1.0.0.dev2
 Summary: A python package for explainable sleep staging via deep learning
 Author-email: Guido Gagliardi <guido.gagliardi@phd.unipi.it>
+License: MIT License
+        
+        Copyright (c) 2023 Guido Gagliardi
+        
+        Permission is hereby granted, free of charge, to any person obtaining a copy
+        of this software and associated documentation files (the "Software"), to deal
+        in the Software without restriction, including without limitation the rights
+        to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+        copies of the Software, and to permit persons to whom the Software is
+        furnished to do so, subject to the following conditions:
+        
+        The above copyright notice and this permission notice shall be included in all
+        copies or substantial portions of the Software.
+        
+        THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+        IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+        FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+        AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+        LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+        OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+        SOFTWARE.
+        
+Project-URL: Homepage, https://github.com/guidogagl/physioex
+Project-URL: Documentation, https://guidogagl.github.io/physioex
+Project-URL: Repository, https://github.com/guidogagl/physioex
+Project-URL: Issues, https://github.com/guidogagl/physioex/issues
 Description-Content-Type: text/markdown
 License-File: LICENSE
-Requires-Dist: pyyaml==6.0.2
-Requires-Dist: argparse
-Requires-Dist: loguru==0.7.2
-Requires-Dist: pkg_resources
-Requires-Dist: some_other_dependency
 Requires-Dist: boto3==1.35.3
 Requires-Dist: botocore==1.35.3
 Requires-Dist: braindecode==0.8.1
@@ -18,6 +39,7 @@ Requires-Dist: dirhash==0.5.0
 Requires-Dist: h5py==3.11.0
 Requires-Dist: joblib==1.4.2
 Requires-Dist: lightning==2.4.0
+Requires-Dist: loguru==0.7.2
 Requires-Dist: matplotlib==3.9.2
 Requires-Dist: npy_append_array==0.9.16
 Requires-Dist: numpy==2.1.1
@@ -28,6 +50,7 @@ Requires-Dist: pyEDFlib==0.1.38
 Requires-Dist: pytorch_lightning==2.4.0
 Requires-Dist: pytorch_metric_learning==2.6.0
 Requires-Dist: pyunpack==0.3
+Requires-Dist: PyYAML==6.0.2
 Requires-Dist: rarfile==4.2
 Requires-Dist: requests==2.32.3
 Requires-Dist: scikit_learn==1.5.2
@@ -40,7 +63,7 @@ Requires-Dist: tqdm==4.66.5
 Requires-Dist: wfdb==4.1.2
 
 <div style = "text-align: center;">
-<img src="docs/assets/images/logo.svg" width = "250px", alt="PhysioEx Logo">
+<img src="https://raw.githubusercontent.com/guidogagl/physioex/refs/heads/main/docs/assets/images/logo.svg" width = "250px", alt="PhysioEx Logo">
 
 <h1> PhysioEx </h1>
 </div>
@@ -73,19 +96,29 @@ For the public available datasets ( DCSM, HMC ) PhysioEx takes care of automatic
 
 ## Installation guidelines
 
-1. **Clone the Repository:**
-```bash
-   git clone https://github.com/guidogagl/physioex.git
-   cd physioex
-```
-2. **Create a Virtual Environment (Optional but Recommended)**
+### Create a Virtual Environment (Optional but Recommended)
+
 ```bash
     conda create -n physioex python==3.10
     conda activate physioex
     conda install pip
     pip install --upgrade pip  # On Windows, use `venv\Scripts\activate`
 ```
-3. **Install Dependencies and Package in Development Mode**
+### Install via pip
+
+1. **Install PhysioEx from PyPI:**
+```bash
+pip install physioex
+```
+
+### Install from source
+1. **Clone the Repository:**
+```bash
+   git clone https://github.com/guidogagl/physioex.git
+   cd physioex
+```
+
+2. **Install Dependencies and Package in Development Mode**
 ```bash
     pip install -e .
 ```

{physioex-1.0.0.dev1 → physioex-1.0.0.dev2}/README.md

@@ -1,5 +1,5 @@
 <div style = "text-align: center;">
-<img src="docs/assets/images/logo.svg" width = "250px", alt="PhysioEx Logo">
+<img src="https://raw.githubusercontent.com/guidogagl/physioex/refs/heads/main/docs/assets/images/logo.svg" width = "250px", alt="PhysioEx Logo">
 
 <h1> PhysioEx </h1>
 </div>
@@ -32,19 +32,29 @@ For the public available datasets ( DCSM, HMC ) PhysioEx takes care of automatic
 
 ## Installation guidelines
 
-1. **Clone the Repository:**
-```bash
-   git clone https://github.com/guidogagl/physioex.git
-   cd physioex
-```
-2. **Create a Virtual Environment (Optional but Recommended)**
+### Create a Virtual Environment (Optional but Recommended)
+
 ```bash
     conda create -n physioex python==3.10
     conda activate physioex
     conda install pip
     pip install --upgrade pip  # On Windows, use `venv\Scripts\activate`
 ```
-3. **Install Dependencies and Package in Development Mode**
+### Install via pip
+
+1. **Install PhysioEx from PyPI:**
+```bash
+pip install physioex
+```
+
+### Install from source
+1. **Clone the Repository:**
+```bash
+   git clone https://github.com/guidogagl/physioex.git
+   cd physioex
+```
+
+2. **Install Dependencies and Package in Development Mode**
 ```bash
     pip install -e .
 ```

{physioex-1.0.0.dev1 → physioex-1.0.0.dev2}/physioex.egg-info/PKG-INFO

@@ -1,15 +1,36 @@
 Metadata-Version: 2.1
 Name: physioex
-Version: 1.0.0.dev1
+Version: 1.0.0.dev2
 Summary: A python package for explainable sleep staging via deep learning
 Author-email: Guido Gagliardi <guido.gagliardi@phd.unipi.it>
+License: MIT License
+        
+        Copyright (c) 2023 Guido Gagliardi
+        
+        Permission is hereby granted, free of charge, to any person obtaining a copy
+        of this software and associated documentation files (the "Software"), to deal
+        in the Software without restriction, including without limitation the rights
+        to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+        copies of the Software, and to permit persons to whom the Software is
+        furnished to do so, subject to the following conditions:
+        
+        The above copyright notice and this permission notice shall be included in all
+        copies or substantial portions of the Software.
+        
+        THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+        IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+        FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+        AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+        LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+        OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+        SOFTWARE.
+        
+Project-URL: Homepage, https://github.com/guidogagl/physioex
+Project-URL: Documentation, https://guidogagl.github.io/physioex
+Project-URL: Repository, https://github.com/guidogagl/physioex
+Project-URL: Issues, https://github.com/guidogagl/physioex/issues
 Description-Content-Type: text/markdown
 License-File: LICENSE
-Requires-Dist: pyyaml==6.0.2
-Requires-Dist: argparse
-Requires-Dist: loguru==0.7.2
-Requires-Dist: pkg_resources
-Requires-Dist: some_other_dependency
 Requires-Dist: boto3==1.35.3
 Requires-Dist: botocore==1.35.3
 Requires-Dist: braindecode==0.8.1
@@ -18,6 +39,7 @@ Requires-Dist: dirhash==0.5.0
 Requires-Dist: h5py==3.11.0
 Requires-Dist: joblib==1.4.2
 Requires-Dist: lightning==2.4.0
+Requires-Dist: loguru==0.7.2
 Requires-Dist: matplotlib==3.9.2
 Requires-Dist: npy_append_array==0.9.16
 Requires-Dist: numpy==2.1.1
@@ -28,6 +50,7 @@ Requires-Dist: pyEDFlib==0.1.38
 Requires-Dist: pytorch_lightning==2.4.0
 Requires-Dist: pytorch_metric_learning==2.6.0
 Requires-Dist: pyunpack==0.3
+Requires-Dist: PyYAML==6.0.2
 Requires-Dist: rarfile==4.2
 Requires-Dist: requests==2.32.3
 Requires-Dist: scikit_learn==1.5.2
@@ -40,7 +63,7 @@ Requires-Dist: tqdm==4.66.5
 Requires-Dist: wfdb==4.1.2
 
 <div style = "text-align: center;">
-<img src="docs/assets/images/logo.svg" width = "250px", alt="PhysioEx Logo">
+<img src="https://raw.githubusercontent.com/guidogagl/physioex/refs/heads/main/docs/assets/images/logo.svg" width = "250px", alt="PhysioEx Logo">
 
 <h1> PhysioEx </h1>
 </div>
@@ -73,19 +96,29 @@ For the public available datasets ( DCSM, HMC ) PhysioEx takes care of automatic
 
 ## Installation guidelines
 
-1. **Clone the Repository:**
-```bash
-   git clone https://github.com/guidogagl/physioex.git
-   cd physioex
-```
-2. **Create a Virtual Environment (Optional but Recommended)**
+### Create a Virtual Environment (Optional but Recommended)
+
 ```bash
     conda create -n physioex python==3.10
     conda activate physioex
     conda install pip
     pip install --upgrade pip  # On Windows, use `venv\Scripts\activate`
 ```
-3. **Install Dependencies and Package in Development Mode**
+### Install via pip
+
+1. **Install PhysioEx from PyPI:**
+```bash
+pip install physioex
+```
+
+### Install from source
+1. **Clone the Repository:**
+```bash
+   git clone https://github.com/guidogagl/physioex.git
+   cd physioex
+```
+
+2. **Install Dependencies and Package in Development Mode**
 ```bash
     pip install -e .
 ```

{physioex-1.0.0.dev1 → physioex-1.0.0.dev2}/physioex.egg-info/requires.txt

@@ -1,8 +1,3 @@
-pyyaml==6.0.2
-argparse
-loguru==0.7.2
-pkg_resources
-some_other_dependency
 boto3==1.35.3
 botocore==1.35.3
 braindecode==0.8.1
@@ -11,6 +6,7 @@ dirhash==0.5.0
 h5py==3.11.0
 joblib==1.4.2
 lightning==2.4.0
+loguru==0.7.2
 matplotlib==3.9.2
 npy_append_array==0.9.16
 numpy==2.1.1
@@ -21,6 +17,7 @@ pyEDFlib==0.1.38
 pytorch_lightning==2.4.0
 pytorch_metric_learning==2.6.0
 pyunpack==0.3
+PyYAML==6.0.2
 rarfile==4.2
 requests==2.32.3
 scikit_learn==1.5.2

{physioex-1.0.0.dev1 → physioex-1.0.0.dev2}/pyproject.toml

@@ -4,18 +4,14 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "physioex"
-version = "1.0.0.dev1"
+version = "1.0.0.dev2"
 description = "A python package for explainable sleep staging via deep learning"
 readme = { file = "README.md", content-type = "text/markdown" }
 authors = [
     { name = "Guido Gagliardi", email = "guido.gagliardi@phd.unipi.it" }
 ]
+license = {file = "LICENSE"}
 dependencies = [
-    "pyyaml==6.0.2",
-    "argparse",
-    "loguru==0.7.2",
-    "pkg_resources",
-    "some_other_dependency",
     "boto3==1.35.3",
     "botocore==1.35.3",
     "braindecode==0.8.1",
@@ -24,6 +20,7 @@ dependencies = [
     "h5py==3.11.0",
     "joblib==1.4.2",
     "lightning==2.4.0",
+    "loguru==0.7.2",
     "matplotlib==3.9.2",
     "npy_append_array==0.9.16",
     "numpy==2.1.1",
@@ -34,6 +31,7 @@ dependencies = [
     "pytorch_lightning==2.4.0",
     "pytorch_metric_learning==2.6.0",
     "pyunpack==0.3",
+    "PyYAML==6.0.2",
     "rarfile==4.2",
     "requests==2.32.3",
     "scikit_learn==1.5.2",
@@ -46,8 +44,15 @@ dependencies = [
     "wfdb==4.1.2"
 ]
 
-[tool.setuptools]
-packages = { find = { where = ["."], include = ["physioex*"] } }
+[project.urls]
+Homepage = "https://github.com/guidogagl/physioex"
+Documentation = "https://guidogagl.github.io/physioex"
+Repository = "https://github.com/guidogagl/physioex"
+Issues = "https://github.com/guidogagl/physioex/issues"
+
+[tool.setuptools.packages.find]
+where = ["."]
+include = ["physioex*"]
 
 [project.scripts]
 train = "physioex.train.bin.train:train_script"