physioblocks 1.0.0__tar.gz → 1.0.1__tar.gz

{physioblocks-1.0.0 → physioblocks-1.0.1}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: physioblocks
-Version: 1.0.0
+Version: 1.0.1
 Dynamic: Author
 Dynamic: Author-email
 Dynamic: License

{physioblocks-1.0.0 → physioblocks-1.0.1}/physioblocks/__init__.py

@@ -26,7 +26,7 @@
 
 """Physioblocks package definition"""
 
-__version__ = "1.0.0"
+__version__ = "1.0.1"
 __copyright__ = "INRIA"
 __license__ = "LGPL-3.0-only"
 __authors__ = [

physioblocks-1.0.0/doc/build/html/.buildinfo

@@ -1,4 +0,0 @@
-# Sphinx build info version 1
-# This file records the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: efd432c11c801e0d2c433b68089ef1c3
-tags: 645f666f9bcd5a90fca523b33c5a78b7

physioblocks-1.0.0/doc/build/html/_sources/api_reference/base.rst.txt

@@ -1,45 +0,0 @@
-.. SPDX-FileCopyrightText: Copyright INRIA
-..
-.. SPDX-License-Identifier: LGPL-3.0-only
-..
-.. Copyright INRIA
-..
-.. This file is part of PhysioBlocks, a library mostly developed by the
-.. [Ananke project-team](https://team.inria.fr/ananke) at INRIA.
-..
-.. Authors:
-.. - Colin Drieu
-.. - Dominique Chapelle
-.. - François Kimmig
-.. - Philippe Moireau
-..
-.. PhysioBlocks is free software: you can redistribute it and/or modify it under the
-.. terms of the GNU Lesser General Public License as published by the Free Software
-.. Foundation, version 3 of the License.
-..
-.. PhysioBlocks is distributed in the hope that it will be useful, but WITHOUT ANY
-.. WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A
-.. PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.
-..
-.. You should have received a copy of the GNU Lesser General Public License along with
-.. PhysioBlocks. If not, see <https://www.gnu.org/licenses/>.
-
-***********
-Base Module
-***********
-
-.. automodule:: physioblocks.base
-    :members:
-
-Operators
-=========
-
-.. automodule:: physioblocks.base.operators
-    :members:
-
-
-Registers
-=========
-
-.. automodule:: physioblocks.base.registers
-    :members:

physioblocks-1.0.0/doc/build/html/_sources/api_reference/computing.rst.txt

@@ -1,55 +0,0 @@
-.. SPDX-FileCopyrightText: Copyright INRIA
-..
-.. SPDX-License-Identifier: LGPL-3.0-only
-..
-.. Copyright INRIA
-..
-.. This file is part of PhysioBlocks, a library mostly developed by the
-.. [Ananke project-team](https://team.inria.fr/ananke) at INRIA.
-..
-.. Authors:
-.. - Colin Drieu
-.. - Dominique Chapelle
-.. - François Kimmig
-.. - Philippe Moireau
-..
-.. PhysioBlocks is free software: you can redistribute it and/or modify it under the
-.. terms of the GNU Lesser General Public License as published by the Free Software
-.. Foundation, version 3 of the License.
-..
-.. PhysioBlocks is distributed in the hope that it will be useful, but WITHOUT ANY
-.. WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A
-.. PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.
-..
-.. You should have received a copy of the GNU Lesser General Public License along with
-.. PhysioBlocks. If not, see <https://www.gnu.org/licenses/>.
-
-****************
-Computing Module
-****************
-
-The computing module declares functions and classes to:
-
-    * Hold numerical values for model quantities.
-    * Declare **Expressions** to define the **Blocks** and **ModelComponents** Flux, InternalExpressions and SavedQuantities
-    * Assemble the global **System** from those declaration.
-
-.. _quantity_ref:
-
-Quantities
-==========
-
-.. automodule:: physioblocks.computing.quantities
-    :members:
-
-Models
-======
-
-.. automodule:: physioblocks.computing.models
-    :members:
-
-Assembling
-==========
-
-.. automodule:: physioblocks.computing.assembling
-    :members:

physioblocks-1.0.0/doc/build/html/_sources/api_reference/configuration.rst.txt

@@ -1,50 +0,0 @@
-.. SPDX-FileCopyrightText: Copyright INRIA
-..
-.. SPDX-License-Identifier: LGPL-3.0-only
-..
-.. Copyright INRIA
-..
-.. This file is part of PhysioBlocks, a library mostly developed by the
-.. [Ananke project-team](https://team.inria.fr/ananke) at INRIA.
-..
-.. Authors:
-.. - Colin Drieu
-.. - Dominique Chapelle
-.. - François Kimmig
-.. - Philippe Moireau
-..
-.. PhysioBlocks is free software: you can redistribute it and/or modify it under the
-.. terms of the GNU Lesser General Public License as published by the Free Software
-.. Foundation, version 3 of the License.
-..
-.. PhysioBlocks is distributed in the hope that it will be useful, but WITHOUT ANY
-.. WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A
-.. PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.
-..
-.. You should have received a copy of the GNU Lesser General Public License along with
-.. PhysioBlocks. If not, see <https://www.gnu.org/licenses/>.
-
-********************
-Configuration Module
-********************
-
-Defines classes and functions to turn PhysioBlocks objects into a generic configuration that can
-be saved or loaded.
-
-Configuration
-=============
-
-.. automodule:: physioblocks.configuration.base
-    :members:
-
-Load ans save functions
-=======================
-
-.. automodule:: physioblocks.configuration.functions
-    :members:
-
-Aliases
-=======
-
-.. automodule:: physioblocks.configuration.aliases
-    :members:

physioblocks-1.0.0/doc/build/html/_sources/api_reference/description.rst.txt

@@ -1,51 +0,0 @@
-.. SPDX-FileCopyrightText: Copyright INRIA
-..
-.. SPDX-License-Identifier: LGPL-3.0-only
-..
-.. Copyright INRIA
-..
-.. This file is part of PhysioBlocks, a library mostly developed by the
-.. [Ananke project-team](https://team.inria.fr/ananke) at INRIA.
-..
-.. Authors:
-.. - Colin Drieu
-.. - Dominique Chapelle
-.. - François Kimmig
-.. - Philippe Moireau
-..
-.. PhysioBlocks is free software: you can redistribute it and/or modify it under the
-.. terms of the GNU Lesser General Public License as published by the Free Software
-.. Foundation, version 3 of the License.
-..
-.. PhysioBlocks is distributed in the hope that it will be useful, but WITHOUT ANY
-.. WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A
-.. PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.
-..
-.. You should have received a copy of the GNU Lesser General Public License along with
-.. PhysioBlocks. If not, see <https://www.gnu.org/licenses/>.
-
-******************
-Description Module
-******************
-
-Declares objects and functions to describe **Nets**.
-
-Flux
-====
-
-.. automodule:: physioblocks.description.flux
-    :members:
-
-Blocks
-======
-
-.. _api_reference_blocks:
-
-.. automodule:: physioblocks.description.blocks
-    :members:
-
-Nets
-====
-
-.. automodule:: physioblocks.description.nets
-    :members:

physioblocks-1.0.0/doc/build/html/_sources/api_reference/io.rst.txt

@@ -1,44 +0,0 @@
-.. SPDX-FileCopyrightText: Copyright INRIA
-..
-.. SPDX-License-Identifier: LGPL-3.0-only
-..
-.. Copyright INRIA
-..
-.. This file is part of PhysioBlocks, a library mostly developed by the
-.. [Ananke project-team](https://team.inria.fr/ananke) at INRIA.
-..
-.. Authors:
-.. - Colin Drieu
-.. - Dominique Chapelle
-.. - François Kimmig
-.. - Philippe Moireau
-..
-.. PhysioBlocks is free software: you can redistribute it and/or modify it under the
-.. terms of the GNU Lesser General Public License as published by the Free Software
-.. Foundation, version 3 of the License.
-..
-.. PhysioBlocks is distributed in the hope that it will be useful, but WITHOUT ANY
-.. WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A
-.. PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.
-..
-.. You should have received a copy of the GNU Lesser General Public License along with
-.. PhysioBlocks. If not, see <https://www.gnu.org/licenses/>.
-
-*********
-IO Module
-*********
-
-.. automodule:: physioblocks.io
-    :members:
-
-Configuration
-=============
-
-.. automodule:: physioblocks.io.configuration
-    :members:
-
-Aliases
-=======
-
-.. automodule:: physioblocks.io.aliases
-    :members:

physioblocks-1.0.0/doc/build/html/_sources/api_reference/registers.rst.txt

@@ -1,51 +0,0 @@
-.. SPDX-FileCopyrightText: Copyright INRIA
-..
-.. SPDX-License-Identifier: LGPL-3.0-only
-..
-.. Copyright INRIA
-..
-.. This file is part of PhysioBlocks, a library mostly developed by the
-.. [Ananke project-team](https://team.inria.fr/ananke) at INRIA.
-..
-.. Authors:
-.. - Colin Drieu
-.. - Dominique Chapelle
-.. - François Kimmig
-.. - Philippe Moireau
-..
-.. PhysioBlocks is free software: you can redistribute it and/or modify it under the
-.. terms of the GNU Lesser General Public License as published by the Free Software
-.. Foundation, version 3 of the License.
-..
-.. PhysioBlocks is distributed in the hope that it will be useful, but WITHOUT ANY
-.. WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A
-.. PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.
-..
-.. You should have received a copy of the GNU Lesser General Public License along with
-.. PhysioBlocks. If not, see <https://www.gnu.org/licenses/>.
-
-***************
-Register Module
-***************
-
-Declares decorators to register types or functions for a specific use.
-
-Type register
-=============
-
-.. automodule:: physioblocks.registers.type_register
-    :members:
-
-
-Load functions register
-=======================
-
-.. automodule:: physioblocks.registers.load_function_register
-    :members:
-
-
-Save functions register
-=======================
-
-.. automodule:: physioblocks.registers.save_function_register
-    :members:

physioblocks-1.0.0/doc/build/html/_sources/api_reference/simulation.rst.txt

@@ -1,77 +0,0 @@
-.. SPDX-FileCopyrightText: Copyright INRIA
-..
-.. SPDX-License-Identifier: LGPL-3.0-only
-..
-.. Copyright INRIA
-..
-.. This file is part of PhysioBlocks, a library mostly developed by the
-.. [Ananke project-team](https://team.inria.fr/ananke) at INRIA.
-..
-.. Authors:
-.. - Colin Drieu
-.. - Dominique Chapelle
-.. - François Kimmig
-.. - Philippe Moireau
-..
-.. PhysioBlocks is free software: you can redistribute it and/or modify it under the
-.. terms of the GNU Lesser General Public License as published by the Free Software
-.. Foundation, version 3 of the License.
-..
-.. PhysioBlocks is distributed in the hope that it will be useful, but WITHOUT ANY
-.. WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A
-.. PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.
-..
-.. You should have received a copy of the GNU Lesser General Public License along with
-.. PhysioBlocks. If not, see <https://www.gnu.org/licenses/>.
-
-*****************
-Simulation Module
-*****************
-
-Define methods to setup a simulation and run it.
-
-Time
-====
-
-.. automodule:: physioblocks.simulation.time_manager
-    :members:
-
-
-State
-=====
-
-.. automodule:: physioblocks.simulation.state
-    :members:
-
-.. _api_reference_simulation_solvers:
-
-Solvers
-=======
-
-.. automodule:: physioblocks.simulation.solvers
-    :members:
-
-Saved Quantities
-================
-
-.. automodule:: physioblocks.simulation.saved_quantities
-    :members:
-
-Functions
-=========
-
-.. automodule:: physioblocks.simulation.functions
-    :members:
-
-Setup
-=====
-
-.. automodule:: physioblocks.simulation.setup
-    :members:
-
-
-Runtime
-=======
-
-.. automodule:: physioblocks.simulation.runtime
-    :members:

physioblocks-1.0.0/doc/build/html/_sources/api_reference/utils.rst.txt

@@ -1,56 +0,0 @@
-.. SPDX-FileCopyrightText: Copyright INRIA
-..
-.. SPDX-License-Identifier: LGPL-3.0-only
-..
-.. Copyright INRIA
-..
-.. This file is part of PhysioBlocks, a library mostly developed by the
-.. [Ananke project-team](https://team.inria.fr/ananke) at INRIA.
-..
-.. Authors:
-.. - Colin Drieu
-.. - Dominique Chapelle
-.. - François Kimmig
-.. - Philippe Moireau
-..
-.. PhysioBlocks is free software: you can redistribute it and/or modify it under the
-.. terms of the GNU Lesser General Public License as published by the Free Software
-.. Foundation, version 3 of the License.
-..
-.. PhysioBlocks is distributed in the hope that it will be useful, but WITHOUT ANY
-.. WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A
-.. PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.
-..
-.. You should have received a copy of the GNU Lesser General Public License along with
-.. PhysioBlocks. If not, see <https://www.gnu.org/licenses/>.
-
-************
-Utils Module
-************
-
-.. automodule:: physioblocks.utils
-    :members:
-
-Exceptions Utils
-================
-
-.. automodule:: physioblocks.utils.exceptions_utils
-    :members:
-
-Dynamic Import Utils
-====================
-
-.. automodule:: physioblocks.utils.dynamic_import_utils
-    :members:
-
-Math Utils
-==========
-
-.. automodule:: physioblocks.utils.math_utils
-    :members:
-
-Gradient Test Utils
-===================
-
-.. automodule:: physioblocks.utils.gradient_test_utils
-    :members:

physioblocks-1.0.0/doc/build/html/_sources/api_reference.rst.txt

@@ -1,44 +0,0 @@
-.. SPDX-FileCopyrightText: Copyright INRIA
-..
-.. SPDX-License-Identifier: LGPL-3.0-only
-..
-.. Copyright INRIA
-..
-.. This file is part of PhysioBlocks, a library mostly developed by the
-.. [Ananke project-team](https://team.inria.fr/ananke) at INRIA.
-..
-.. Authors:
-.. - Colin Drieu
-.. - Dominique Chapelle
-.. - François Kimmig
-.. - Philippe Moireau
-..
-.. PhysioBlocks is free software: you can redistribute it and/or modify it under the
-.. terms of the GNU Lesser General Public License as published by the Free Software
-.. Foundation, version 3 of the License.
-..
-.. PhysioBlocks is distributed in the hope that it will be useful, but WITHOUT ANY
-.. WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A
-.. PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details.
-..
-.. You should have received a copy of the GNU Lesser General Public License along with
-.. PhysioBlocks. If not, see <https://www.gnu.org/licenses/>.
-
-.. _api_reference :
-
-#############
-API Reference
-#############
-
-.. toctree::
-   :maxdepth: 2
-   :caption: Modules:
-   
-   api_reference/base
-   api_reference/computing.rst
-   api_reference/description
-   api_reference/simulation
-   api_reference/configuration
-   api_reference/registers
-   api_reference/io
-   api_reference/utils