phylogenie 2.1.3__tar.gz → 2.1.4__tar.gz
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- {phylogenie-2.1.3 → phylogenie-2.1.4}/PKG-INFO +1 -1
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/tree.py +5 -1
- {phylogenie-2.1.3 → phylogenie-2.1.4}/pyproject.toml +1 -1
- {phylogenie-2.1.3 → phylogenie-2.1.4}/LICENSE.txt +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/README.md +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/__init__.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/generators/__init__.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/generators/alisim.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/generators/configs.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/generators/dataset.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/generators/factories.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/generators/trees.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/generators/typeguards.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/io.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/main.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/msa.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/py.typed +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/skyline/__init__.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/skyline/matrix.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/skyline/parameter.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/skyline/vector.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/treesimulator/__init__.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/treesimulator/events/__init__.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/treesimulator/events/contact_tracing.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/treesimulator/events/core.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/treesimulator/events/mutations.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/treesimulator/gillespie.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/treesimulator/model.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/typeguards.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/typings.py +0 -0
- {phylogenie-2.1.3 → phylogenie-2.1.4}/phylogenie/utils.py +0 -0
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@@ -61,7 +61,11 @@ class Tree:
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def get_time(self) -> float:
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parent_time = 0 if self.parent is None else self.parent.get_time()
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if self.branch_length is None:
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if self.parent is not None:
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raise ValueError(
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f"Branch length of non-root node {self.id} is not set."
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)
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return 0.0
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return self.branch_length + parent_time
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def set(self, key: str, value: Any) -> None:
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