phylogenie 2.0.3__tar.gz → 2.0.5__tar.gz

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Files changed (27) hide show
  1. {phylogenie-2.0.3 → phylogenie-2.0.5}/PKG-INFO +1 -1
  2. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/generators/dataset.py +1 -1
  3. {phylogenie-2.0.3 → phylogenie-2.0.5}/pyproject.toml +1 -1
  4. {phylogenie-2.0.3 → phylogenie-2.0.5}/LICENSE.txt +0 -0
  5. {phylogenie-2.0.3 → phylogenie-2.0.5}/README.md +0 -0
  6. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/__init__.py +0 -0
  7. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/generators/__init__.py +0 -0
  8. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/generators/alisim.py +0 -0
  9. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/generators/configs.py +0 -0
  10. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/generators/factories.py +0 -0
  11. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/generators/trees.py +0 -0
  12. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/generators/typeguards.py +0 -0
  13. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/io.py +0 -0
  14. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/main.py +0 -0
  15. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/msa.py +0 -0
  16. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/py.typed +0 -0
  17. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/skyline/__init__.py +0 -0
  18. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/skyline/matrix.py +0 -0
  19. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/skyline/parameter.py +0 -0
  20. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/skyline/vector.py +0 -0
  21. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/tree.py +0 -0
  22. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/treesimulator/__init__.py +0 -0
  23. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/treesimulator/events.py +0 -0
  24. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/treesimulator/gillespie.py +0 -0
  25. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/treesimulator/model.py +0 -0
  26. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/typeguards.py +0 -0
  27. {phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/typings.py +0 -0
{phylogenie-2.0.3 → phylogenie-2.0.5}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: phylogenie
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- Version: 2.0.3
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+ Version: 2.0.5
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  Summary: Generate phylogenetic datasets with minimal setup effort
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  Author: Gabriele Marino
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  Author-email: gabmarino.8601@gmail.com
{phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/generators/dataset.py RENAMED
@@ -47,7 +47,7 @@ class DatasetGenerator(ABC, StrictBaseModel):
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  return
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  os.makedirs(data_dir)
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- data: list[dict[str, Any]] = [{}] * n_samples
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+ data: list[dict[str, Any]] = [{} for _ in range(n_samples)]
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  if self.context is not None:
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  for d, (k, v) in product(data, self.context.items()):
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  args = v.model_extra if v.model_extra is not None else {}
{phylogenie-2.0.3 → phylogenie-2.0.5}/pyproject.toml RENAMED
@@ -1,6 +1,6 @@
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  [tool.poetry]
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  name = "phylogenie"
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- version = "2.0.3"
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+ version = "2.0.5"
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  description = "Generate phylogenetic datasets with minimal setup effort"
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  authors = ["Gabriele Marino <gabmarino.8601@gmail.com>"]
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  readme = "README.md"
{phylogenie-2.0.3 → phylogenie-2.0.5}/LICENSE.txt RENAMED
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{phylogenie-2.0.3 → phylogenie-2.0.5}/README.md RENAMED
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{phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/io.py RENAMED
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{phylogenie-2.0.3 → phylogenie-2.0.5}/phylogenie/msa.py RENAMED
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