phenoml 0.0.17__tar.gz → 0.0.18__tar.gz

{phenoml-0.0.17 → phenoml-0.0.18}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.1
 Name: phenoml
-Version: 0.0.17
+Version: 0.0.18
 Summary: 
 Requires-Python: >=3.8,<4.0
 Classifier: Intended Audience :: Developers

{phenoml-0.0.17 → phenoml-0.0.18}/pyproject.toml

@@ -3,7 +3,7 @@ name = "phenoml"
 
 [tool.poetry]
 name = "phenoml"
-version = "v0.0.17"
+version = "v0.0.18"
 description = ""
 readme = "README.md"
 authors = []

{phenoml-0.0.17 → phenoml-0.0.18}/src/phenoml/construe/types/extract_request_config.py

@@ -16,7 +16,10 @@ class ExtractRequestConfig(UniversalBaseModel):
 
     max_codes_per_chunk: typing.Optional[int] = pydantic.Field(default=None)
     """
-    Maximum number of codes to extract per chunk
+    Maximum number of codes to extract per chunk. If not specified, uses system-specific defaults:
+    * SNOMED: 10
+    * LOINC, HPO, RXNORM: 20
+    * All other systems: 5
     """
 
     code_similarity_filter: typing.Optional[float] = pydantic.Field(default=None)
@@ -42,6 +45,11 @@ class ExtractRequestConfig(UniversalBaseModel):
     Whether to include ancestor/parent codes in the results
     """
 
+    include_invalid: typing.Optional[bool] = pydantic.Field(default=None)
+    """
+    Whether to include codes that failed validation in the results
+    """
+
     if IS_PYDANTIC_V2:
         model_config: typing.ClassVar[pydantic.ConfigDict] = pydantic.ConfigDict(extra="allow", frozen=True)  # type: ignore # Pydantic v2
     else:

{phenoml-0.0.17 → phenoml-0.0.18}/src/phenoml/construe/types/extracted_code_result.py

@@ -19,6 +19,11 @@ class ExtractedCodeResult(UniversalBaseModel):
     Short description of the code
     """
 
+    valid: bool = pydantic.Field()
+    """
+    Whether the code passed validation. Always true unless include_invalid is set to true, in which case invalid codes will have this set to false.
+    """
+
     long_description: typing_extensions.Annotated[typing.Optional[str], FieldMetadata(alias="longDescription")] = (
         pydantic.Field(default=None)
     )

{phenoml-0.0.17 → phenoml-0.0.18}/src/phenoml/core/client_wrapper.py

@@ -22,10 +22,10 @@ class BaseClientWrapper:
 
     def get_headers(self) -> typing.Dict[str, str]:
         headers: typing.Dict[str, str] = {
-            "User-Agent": "phenoml/v0.0.17",
+            "User-Agent": "phenoml/v0.0.18",
             "X-Fern-Language": "Python",
             "X-Fern-SDK-Name": "phenoml",
-            "X-Fern-SDK-Version": "v0.0.17",
+            "X-Fern-SDK-Version": "v0.0.18",
             **(self.get_custom_headers() or {}),
         }
         headers["Authorization"] = f"Bearer {self._get_token()}"