pg-sui 1.6.14.dev8__tar.gz → 1.6.14.dev9__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (162) hide show
  1. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/.github/workflows/conda.yaml +2 -0
  2. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/PKG-INFO +1 -1
  3. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/conda/recipe/conda_build_config.yaml +4 -0
  4. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/conda/recipe/meta.yaml +3 -2
  5. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pg_sui.egg-info/PKG-INFO +1 -1
  6. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/_version.py +3 -3
  7. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/.dockerignore +0 -0
  8. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/.gitattributes +0 -0
  9. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/.github/workflows/docker.yaml +0 -0
  10. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/.github/workflows/release.yaml +0 -0
  11. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/.gitignore +0 -0
  12. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/.readthedocs.yaml +0 -0
  13. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/.vscode/launch.json +0 -0
  14. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/.vscode/settings.json +0 -0
  15. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/Dockerfile +0 -0
  16. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/LICENSE +0 -0
  17. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/MANIFEST.in +0 -0
  18. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/README.md +0 -0
  19. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/changelog.md +0 -0
  20. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/conda/recipe/bld.bat +0 -0
  21. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/configs/config.yaml +0 -0
  22. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/Makefile +0 -0
  23. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/_static/custom.css +0 -0
  24. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/_templates +0 -0
  25. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/about.rst +0 -0
  26. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/changelog.rst +0 -0
  27. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/conf.py +0 -0
  28. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/gui.rst +0 -0
  29. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/implement_new_models.rst +0 -0
  30. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/imputer_methods.rst +0 -0
  31. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/index.rst +0 -0
  32. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/install.rst +0 -0
  33. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/make.bat +0 -0
  34. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/modules.rst +0 -0
  35. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/non_ml_imputers.rst +0 -0
  36. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/pgsui.data_processing.rst +0 -0
  37. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/pgsui.impute.rst +0 -0
  38. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/pgsui.impute.supervised.imputers.rst +0 -0
  39. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/pgsui.impute.supervised.rst +0 -0
  40. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/pgsui.impute.unsupervised.imputers.rst +0 -0
  41. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/pgsui.impute.unsupervised.models.rst +0 -0
  42. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/pgsui.impute.unsupervised.rst +0 -0
  43. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/pgsui.rst +0 -0
  44. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/pgsui.utils.rst +0 -0
  45. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/supervised_imputers.rst +0 -0
  46. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/tutorial.rst +0 -0
  47. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/docs/build/unsupervised_imputers.rst +0 -0
  48. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/environment.yml +0 -0
  49. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/img/NLPCA_Model_Architecture.svg +0 -0
  50. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/img/VAE_Model_Architecture_rotated.svg +0 -0
  51. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/img/pgsui-logo-faded-thumb.png +0 -0
  52. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/img/pgsui-logo-faded.png +0 -0
  53. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/img/pgsui-logo-notfaded.png +0 -0
  54. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/multiqc_config.yaml +0 -0
  55. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/notebooks/run_pgsui_dev.ipynb +0 -0
  56. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/package-lock.json +0 -0
  57. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pg_sui.egg-info/SOURCES.txt +0 -0
  58. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pg_sui.egg-info/dependency_links.txt +0 -0
  59. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pg_sui.egg-info/entry_points.txt +0 -0
  60. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pg_sui.egg-info/requires.txt +0 -0
  61. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pg_sui.egg-info/top_level.txt +0 -0
  62. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/__init__.py +0 -0
  63. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/cli.py +0 -0
  64. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/data_processing/__init__.py +0 -0
  65. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/data_processing/config.py +0 -0
  66. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/data_processing/containers.py +0 -0
  67. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/data_processing/transformers.py +0 -0
  68. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/__init__.py +0 -0
  69. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/__main__.py +0 -0
  70. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/extra-resources/.gitkeep +0 -0
  71. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/icons/icons/1024x1024.png +0 -0
  72. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/icons/icons/128x128.png +0 -0
  73. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/icons/icons/16x16.png +0 -0
  74. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/icons/icons/24x24.png +0 -0
  75. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/icons/icons/256x256.png +0 -0
  76. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/icons/icons/32x32.png +0 -0
  77. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/icons/icons/48x48.png +0 -0
  78. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/icons/icons/512x512.png +0 -0
  79. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/icons/icons/64x64.png +0 -0
  80. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/icons/icons/icon.icns +0 -0
  81. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/icons/icons/icon.ico +0 -0
  82. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/main.js +0 -0
  83. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/package-lock.json +0 -0
  84. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/package.json +0 -0
  85. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/preload.js +0 -0
  86. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/server.py +0 -0
  87. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/ui/logo.png +0 -0
  88. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/ui/renderer.js +0 -0
  89. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/ui/styles.css +0 -0
  90. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/app/ui/ui_shim.js +0 -0
  91. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/bootstrap.py +0 -0
  92. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/launch.py +0 -0
  93. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/electron/package.json +0 -0
  94. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/example_data/__init__.py +0 -0
  95. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/example_data/phylip_files/__init__.py +0 -0
  96. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/example_data/phylip_files/test.phy +0 -0
  97. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/example_data/popmaps/__init__.py +0 -0
  98. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/example_data/popmaps/phylogen_nomx.popmap +0 -0
  99. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/example_data/structure_files/__init__.py +0 -0
  100. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/example_data/structure_files/test.pops.2row.allsites.str +0 -0
  101. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/example_data/vcf_files/phylogen_subset14K.vcf.gz +0 -0
  102. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/example_data/vcf_files/phylogen_subset14K.vcf.gz.tbi +0 -0
  103. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/__init__.py +0 -0
  104. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/deterministic/imputers/allele_freq.py +0 -0
  105. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/deterministic/imputers/mode.py +0 -0
  106. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/deterministic/imputers/nmf.py +0 -0
  107. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/deterministic/imputers/phylo.py +0 -0
  108. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/deterministic/imputers/ref_allele.py +0 -0
  109. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/supervised/__init__.py +0 -0
  110. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/supervised/base.py +0 -0
  111. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/supervised/imputers/__init__.py +0 -0
  112. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/supervised/imputers/hist_gradient_boosting.py +0 -0
  113. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/supervised/imputers/random_forest.py +0 -0
  114. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/unsupervised/__init__.py +0 -0
  115. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/unsupervised/base.py +0 -0
  116. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/unsupervised/callbacks.py +0 -0
  117. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/unsupervised/imputers/__init__.py +0 -0
  118. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/unsupervised/imputers/autoencoder.py +0 -0
  119. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/unsupervised/imputers/nlpca.py +0 -0
  120. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/unsupervised/imputers/ubp.py +0 -0
  121. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/unsupervised/imputers/vae.py +0 -0
  122. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/unsupervised/loss_functions.py +0 -0
  123. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/unsupervised/models/__init__.py +0 -0
  124. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/unsupervised/models/autoencoder_model.py +0 -0
  125. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/unsupervised/models/nlpca_model.py +0 -0
  126. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/unsupervised/models/ubp_model.py +0 -0
  127. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/unsupervised/models/vae_model.py +0 -0
  128. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/impute/unsupervised/nn_scorers.py +0 -0
  129. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/utils/__init__.py +0 -0
  130. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/utils/classification_viz.py +0 -0
  131. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/utils/logging_utils.py +0 -0
  132. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/utils/misc.py +0 -0
  133. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/utils/plotting.py +0 -0
  134. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/utils/pretty_metrics.py +0 -0
  135. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/utils/scorers.py +0 -0
  136. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pyproject.toml +0 -0
  137. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/scripts/build_gui_dists.zsh +0 -0
  138. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/scripts/download_training_data.zsh +0 -0
  139. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/scripts/pg_sui.py +0 -0
  140. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/scripts/run_iqtree.zsh +0 -0
  141. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/scripts/start_pgsui.sh +0 -0
  142. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/scripts/stop_pgsui.sh +0 -0
  143. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/scripts/summarize_input_metadata.py +0 -0
  144. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/scripts/vcf2phy.py +0 -0
  145. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/scripts/vcf2phy.zsh +0 -0
  146. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/setup.cfg +0 -0
  147. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/snpiosp/__init__.py +0 -0
  148. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/snpiosp/compare_dataset_stats.py +0 -0
  149. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/snpiosp/run_snpiosp.py +0 -0
  150. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/snpiosp/snpiosp.py +0 -0
  151. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/tests/conftest.py +0 -0
  152. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/tests/test_config.py +0 -0
  153. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/tests/test_deterministic_imputers.py +0 -0
  154. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/tests/test_imputers_unsupervised.py +0 -0
  155. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/tests/test_scorers.py +0 -0
  156. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/tests/test_transformers.py +0 -0
  157. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/workflow/envs/tree_sim.yml +0 -0
  158. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/workflow/profile/config.yaml +0 -0
  159. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/workflow/run_sim1.smk +0 -0
  160. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/workflow/scripts/sim_treeparams.py +0 -0
  161. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/workflow/sim1_config.yaml +0 -0
  162. {pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/workflow/t0.01_c0.1_a0.0_gtrgamma.phylip +0 -0
{pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/.github/workflows/conda.yaml RENAMED
@@ -103,6 +103,8 @@ jobs:
103
103
  CLEAN_VERSION=${CLEAN_VERSION//+/.}
104
104
  export PKG_VERSION=${CLEAN_VERSION:-1.6.8}
105
105
  export SETUPTOOLS_SCM_PRETEND_VERSION=${PKG_VERSION}
106
+ # Help conda/jinja resolve version even if .git metadata is absent
107
+ export GIT_DESCRIBE_TAG=${PKG_VERSION}
106
108
  echo "Building conda package version: ${PKG_VERSION}"
107
109
  conda build conda/recipe --output-folder conda/dist -c btmartin721 -c conda-forge -c bioconda -c pytorch -c defaults
108
110
 
{pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: pg-sui
3
- Version: 1.6.14.dev8
3
+ Version: 1.6.14.dev9
4
4
  Summary: Python machine and deep learning API to impute missing genotypes
5
5
  Author-email: "Drs. Bradley T. Martin and Tyler K. Chafin" <evobio721@gmail.com>
6
6
  Maintainer-email: "Dr. Bradley T. Martin" <evobio721@gmail.com>
{pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/conda/recipe/conda_build_config.yaml RENAMED
@@ -6,6 +6,10 @@ python:
6
6
  numpy:
7
7
  - 2.1
8
8
 
9
+ script_env:
10
+ - PKG_VERSION
11
+ - SETUPTOOLS_SCM_PRETEND_VERSION
12
+
9
13
  # Keep channel ordering consistent during solve
10
14
  channel_sources:
11
15
  - btmartin721,conda-forge,bioconda,pytorch,defaults
{pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/conda/recipe/meta.yaml RENAMED
@@ -1,6 +1,6 @@
1
1
  # meta.yaml - pg-sui conda recipe
2
- # Normalize PKG_VERSION to conda-friendly format (strip leading "v", replace hyphens/plus with dots)
3
- {% set raw_version = environ.get("PKG_VERSION") | default("1.6.8", true) %}
2
+ # Normalize version from CI/exported variables (PKG_VERSION/SETUPTOOLS_SCM_PRETEND_VERSION/GIT_DESCRIBE_TAG), fallback to default.
3
+ {% set raw_version = environ.get("SETUPTOOLS_SCM_PRETEND_VERSION") or environ.get("PKG_VERSION") or environ.get("GIT_DESCRIBE_TAG") or "1.6.8" %}
4
4
  {% set version = raw_version.lstrip("v").replace("-", ".").replace("+", ".") %}
5
5
 
6
6
  package:
@@ -21,6 +21,7 @@ requirements:
21
21
  - pip
22
22
  - setuptools
23
23
  - wheel
24
+ - setuptools-scm
24
25
  run:
25
26
  - python {{ python }}
26
27
  - matplotlib
{pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pg_sui.egg-info/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: pg-sui
3
- Version: 1.6.14.dev8
3
+ Version: 1.6.14.dev9
4
4
  Summary: Python machine and deep learning API to impute missing genotypes
5
5
  Author-email: "Drs. Bradley T. Martin and Tyler K. Chafin" <evobio721@gmail.com>
6
6
  Maintainer-email: "Dr. Bradley T. Martin" <evobio721@gmail.com>
{pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/_version.py RENAMED
@@ -28,7 +28,7 @@ version_tuple: VERSION_TUPLE
28
28
  commit_id: COMMIT_ID
29
29
  __commit_id__: COMMIT_ID
30
30
 
31
- __version__ = version = '1.6.14.dev8'
32
- __version_tuple__ = version_tuple = (1, 6, 14, 'dev8')
31
+ __version__ = version = '1.6.14.dev9'
32
+ __version_tuple__ = version_tuple = (1, 6, 14, 'dev9')
33
33
 
34
- __commit_id__ = commit_id = 'g6f66c25eb'
34
+ __commit_id__ = commit_id = 'gf2e31aebb'
{pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/.dockerignore RENAMED
File without changes
{pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/.gitignore RENAMED
File without changes
{pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/Dockerfile RENAMED
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{pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/LICENSE RENAMED
File without changes
{pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/MANIFEST.in RENAMED
File without changes
{pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/README.md RENAMED
File without changes
{pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/changelog.md RENAMED
File without changes
{pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/pgsui/cli.py RENAMED
File without changes
{pg_sui-1.6.14.dev8 → pg_sui-1.6.14.dev9}/setup.cfg RENAMED
File without changes