pbl-exp 0.1__tar.gz

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+ # Auto detect text files and perform LF normalization
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+ * text=auto
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+ # This workflow will upload a Python Package to PyPI when a release is created
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+ # For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python#publishing-to-package-registries
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+
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+ # This workflow uses actions that are not certified by GitHub.
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+ # They are provided by a third-party and are governed by
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+ # separate terms of service, privacy policy, and support
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+ # documentation.
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+
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+ name: Upload Python Package
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+
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+ on:
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+ release:
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+ types: [published]
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+
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+ permissions:
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+ contents: read
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+
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+ jobs:
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+ release-build:
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+ runs-on: ubuntu-latest
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+
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+ steps:
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+ - uses: actions/checkout@v4
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+ with:
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+ fetch-depth: 0
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+
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+ - uses: actions/setup-python@v5
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+ with:
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+ python-version: "3.x"
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+
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+ - name: Build release distributions
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+ run: |
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+ # NOTE: put your own distribution build steps here.
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+ python -m pip install build
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+ python -m build
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+
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+ - name: Upload distributions
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+ uses: actions/upload-artifact@v4
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+ with:
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+ name: release-dists
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+ path: dist/
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+
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+ pypi-publish:
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+ runs-on: ubuntu-latest
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+ needs:
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+ - release-build
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+ permissions:
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+ # IMPORTANT: this permission is mandatory for trusted publishing
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+ id-token: write
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+
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+ # Dedicated environments with protections for publishing are strongly recommended.
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+ # For more information, see: https://docs.github.com/en/actions/deployment/targeting-different-environments/using-environments-for-deployment#deployment-protection-rules
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+ environment:
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+ name: pypi
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+ url: https://pypi.org/p/VisFeats
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+
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+ steps:
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+ - name: Retrieve release distributions
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+ uses: actions/download-artifact@v4
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+ with:
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+ name: release-dists
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+ path: dist/
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+
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+ - name: Publish release distributions to PyPI
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+ uses: pypa/gh-action-pypi-publish@release/v1
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+ with:
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+ packages-dir: dist/
pbl_exp-0.1/.gitignore ADDED
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+ # Byte-compiled / optimized / DLL files
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+ __pycache__/
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+ *.py[cod]
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+ *$py.class
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+
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+ # C extensions
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+ *.so
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+
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+ # Distribution / packaging
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+ .Python
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+ build/
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+ develop-eggs/
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+ dist/
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+ downloads/
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+ eggs/
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+ .eggs/
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+ lib/
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+ lib64/
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+ parts/
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+ sdist/
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+ var/
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+ wheels/
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+ share/python-wheels/
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+ *.egg-info/
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+ .installed.cfg
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+ *.egg
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+ MANIFEST
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+
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+ # PyInstaller
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+ # Usually these files are written by a python script from a template
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+ # before PyInstaller builds the exe, so as to inject date/other infos into it.
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+ *.manifest
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+ *.spec
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+
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+ # Installer logs
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+ pip-log.txt
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+ pip-delete-this-directory.txt
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+
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+ # Unit test / coverage reports
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+ htmlcov/
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+ .tox/
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+ .nox/
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+ .coverage
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+ .coverage.*
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+ .cache
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+ nosetests.xml
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+ coverage.xml
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+ *.cover
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+ *.py,cover
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+ .hypothesis/
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+ .pytest_cache/
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+ cover/
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+
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+ # Translations
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+ *.mo
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+ *.pot
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+
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+ # Django stuff:
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+ *.log
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+ local_settings.py
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+ db.sqlite3
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+ db.sqlite3-journal
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+
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+ # Flask stuff:
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+ instance/
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+ .webassets-cache
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+
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+ # Scrapy stuff:
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+ .scrapy
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+
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+ # Sphinx documentation
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+ docs/_build/
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+
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+ # PyBuilder
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+ .pybuilder/
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+ target/
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+
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+ # Jupyter Notebook
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+ .ipynb_checkpoints
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+
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+ # IPython
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+ profile_default/
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+ ipython_config.py
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+
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+ # pyenv
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+ # For a library or package, you might want to ignore these files since the code is
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+ # intended to run in multiple environments; otherwise, check them in:
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+ # .python-version
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+
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+ # pipenv
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+ # According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
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+ # However, in case of collaboration, if having platform-specific dependencies or dependencies
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+ # having no cross-platform support, pipenv may install dependencies that don't work, or not
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+ # install all needed dependencies.
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+ #Pipfile.lock
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+
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+ # UV
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+ # Similar to Pipfile.lock, it is generally recommended to include uv.lock in version control.
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+ # This is especially recommended for binary packages to ensure reproducibility, and is more
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+ # commonly ignored for libraries.
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+ #uv.lock
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+
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+ # poetry
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+ # Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
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+ # This is especially recommended for binary packages to ensure reproducibility, and is more
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+ # commonly ignored for libraries.
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+ # https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
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+ #poetry.lock
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+
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+ # pdm
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+ # Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
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+ #pdm.lock
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+ # pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
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+ # in version control.
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+ # https://pdm.fming.dev/latest/usage/project/#working-with-version-control
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+ .pdm.toml
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+ .pdm-python
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+ .pdm-build/
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+
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+ # PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
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+ __pypackages__/
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+
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+ # Celery stuff
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+ celerybeat-schedule
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+ celerybeat.pid
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+
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+ # SageMath parsed files
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+ *.sage.py
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+
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+ # Environments
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+ .env
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+ .venv
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+ env/
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+ venv/
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+ ENV/
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+ env.bak/
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+ venv.bak/
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+
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+ # Spyder project settings
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+ .spyderproject
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+ .spyproject
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+
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+ # Rope project settings
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+ .ropeproject
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+
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+ # mkdocs documentation
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+ /site
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+
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+ # mypy
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+ .mypy_cache/
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+ .dmypy.json
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+ dmypy.json
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+
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+ # Pyre type checker
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+ .pyre/
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+
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+ # pytype static type analyzer
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+ .pytype/
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+
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+ # Cython debug symbols
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+ cython_debug/
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+
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+ # PyCharm
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+ # JetBrains specific template is maintained in a separate JetBrains.gitignore that can
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+ # be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
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+ # and can be added to the global gitignore or merged into this file. For a more nuclear
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+ # option (not recommended) you can uncomment the following to ignore the entire idea folder.
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+ #.idea/
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+
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+ # Ruff stuff:
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+ .ruff_cache/
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+
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+ # PyPI configuration file
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+ .pypirc
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+
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+ # Cursor
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+ # Cursor is an AI-powered code editor.`.cursorignore` specifies files/directories to
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+ # exclude from AI features like autocomplete and code analysis. Recommended for sensitive data
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+ # refer to https://docs.cursor.com/context/ignore-files
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+ .cursorignore
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+ .cursorindexingignore
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+
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+ .demo_logs/
pbl_exp-0.1/LICENSE ADDED
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+ MIT License
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+
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+ Copyright (c) 2026 Qian Chu
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+
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+ Permission is hereby granted, free of charge, to any person obtaining a copy
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+ of this software and associated documentation files (the "Software"), to deal
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+ in the Software without restriction, including without limitation the rights
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+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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+ copies of the Software, and to permit persons to whom the Software is
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+ furnished to do so, subject to the following conditions:
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+
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+ The above copyright notice and this permission notice shall be included in all
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+ copies or substantial portions of the Software.
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+
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+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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+ SOFTWARE.
pbl_exp-0.1/PKG-INFO ADDED
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+ Metadata-Version: 2.4
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+ Name: pbl-exp
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+ Version: 0.1
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+ Summary: Helper functions for running experiments at the Predictive Brain Lab (Bochum)
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+ Author-email: Qian Chu <qianchu99@gmail.com>
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+ Requires-Python: >=3.10
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+ Description-Content-Type: text/markdown
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+ License-File: LICENSE
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+ Requires-Dist: psychopy
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+ Requires-Dist: pupil-labs-realtime-api
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+ Requires-Dist: sr-research-pylink
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+ Dynamic: license-file
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+
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+ # pbl-exp
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+
pbl_exp-0.1/README.md ADDED
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+ # pbl-exp
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+
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+ from psychopy import core, logging, visual
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+ from psychopy.hardware import keyboard
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+
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+ from PBL.exp import get_pupil_labs_device, send_event_to_pupil_labs
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+
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+ # Create a log file to record experiment events and messages
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+ lastLog = logging.LogFile(
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+ "demo_logs/psychopy_and_pupil_labs.log", level=logging.INFO, filemode="w"
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+ )
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+
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+ N = 5 # Number of trials
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+ DUR = 0.5 # Duration of the flash in seconds
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+ INTERVAL = 3 # Interval between flashes in seconds
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+
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+ # Choose whether to record from a Pupil Labs device
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+ device, offset_ns = get_pupil_labs_device()
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+
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+
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+ def end_experiment(device, offset_ns):
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+ if device is not None and offset_ns is not None:
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+ send_event_to_pupil_labs(device, "experiment end", offset_ns)
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+ device.recording_stop_and_save()
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+ device.close()
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+ logging.exp("experiment end")
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+ logging.flush()
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+ core.quit()
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+
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+
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+ # Experiment parameters and PsychoPy objects
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+ win = visual.Window(fullscr=True, color=[-1, -1, -1]) # black
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+ win.mouseVisible = False
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+ square = visual.Rect(win, width=2, height=2, fillColor="white", units="norm")
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+ text = visual.TextStim(win, text="Press space to start", height=0.05, units="height")
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+
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+ kb = keyboard.KeyboardDevice()
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+ kb.registerCallback(
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+ response="escape",
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+ func=end_experiment,
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+ args=[device, offset_ns],
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+ )
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+
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+ # Display initial message and wait for space key to continue
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+ text.draw()
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+ win.flip()
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+ kb.waitKeys(keyList=["space"])
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+ win.flip()
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+ logging.exp("experiment start")
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+ device.recording_start() if device is not None else None
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+ core.wait(3)
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+
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+ for i in range(N):
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+ square.draw()
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+ win.callOnFlip(send_event_to_pupil_labs, device, "flash onset", offset_ns)
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+ win.logOnFlip(level=logging.EXP, msg="flash onset")
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+ win.flip()
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+ core.wait(DUR)
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+ win.flip()
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+ core.wait(INTERVAL)
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+ logging.flush()
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+ kb.getKeys() # Check for escape key press during the interval
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+
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+ core.wait(1)
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+ end_experiment(device, offset_ns)
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+ [build-system]
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+ requires = ["setuptools>=80", "setuptools-scm>=8"]
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+ build-backend = "setuptools.build_meta"
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+
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+ [project]
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+ name = "pbl-exp"
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+ dynamic = ["version"]
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+ description = "Helper functions for running experiments at the Predictive Brain Lab (Bochum)"
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+ readme = "README.md"
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+ authors = [{ name = "Qian Chu", email = "qianchu99@gmail.com" }]
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+ requires-python = ">=3.10"
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+ dependencies = ["psychopy", "pupil-labs-realtime-api", "sr-research-pylink"]
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+
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+ [tool.setuptools.packages.find]
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+ where = ["src"]
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+
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+ [tool.setuptools_scm]
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+ local_scheme = "node-and-date"
pbl_exp-0.1/setup.cfg ADDED
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+ [egg_info]
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+ tag_build =
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+ tag_date = 0
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+
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+ from .pupil_labs import get_pupil_labs_device, send_event_to_pupil_labs
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+
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+ __all__ = ["get_pupil_labs_device", "send_event_to_pupil_labs"]
File without changes
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+ import sys
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+ from time import time_ns
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+
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+ from psychopy import gui, logging
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+ from pupil_labs.realtime_api.simple import Device, discover_devices
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+
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+
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+ def get_pupil_labs_device(search_duration_seconds=5.0):
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+ """
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+ Get the Pupil Labs device and its time offset.
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+
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+ Parameters
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+ ----------
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+ search_duration_seconds : float
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+ Duration to search for Pupil Labs devices.
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+
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+ Returns
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+ -------
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+ device : object or None
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+ The connected Pupil Labs device, or None if not used.
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+ median_offset_ns : int or None
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+ The estimated median time offset of the device in nanoseconds, or None if not used.
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+
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+ Raises
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+ ------
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+ RuntimeError
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+ If no Pupil Labs device is found when one is expected.
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+ """
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+ # Get whether to use the Pupil Labs Eye Tracker
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+ dlg = gui.Dlg(title="Pupil Labs Eye Tracker")
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+ dlg.addField("Use Pupil Labs eye tracker?", False, choices=[True, False])
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+ dlg_data = dlg.show()
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+ sys.exit() if not dlg.OK else None
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+ record_pl = dlg_data[0]
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+
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+ if record_pl:
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+ devices = discover_devices(search_duration_seconds=search_duration_seconds)
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+ if not devices:
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+ dlg = gui.Dlg(title="No Pupil Labs device found")
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+ dlg.addText("No Pupil Labs device found. Check your connection.")
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+ dlg.show()
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+ raise RuntimeError("No Pupil Labs device found.")
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+ elif len(devices) == 1:
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+ device = devices[0]
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+ dlg = gui.Dlg(title="Pupil Labs configuration")
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+ dlg.addText(f"Using the only Pupil Labs device found at {device.address}")
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+ dlg.show()
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+ else:
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+ ip_addresses = [device.address for device in devices]
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+ dlg = gui.Dlg(title="Pupil Labs configuration")
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+ dlg.addText("Multiple Pupil Labs devices found.")
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+ dlg.addField("Select the device to use:", choices=ip_addresses)
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+ dlg.show()
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+ selected_ip = dlg.data[0]
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+ for d in devices:
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+ if d.address == selected_ip:
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+ device = d
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+ else:
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+ d.close()
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+ logging.info(f"Connected to Pupil Labs device at {device.address}")
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+
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+ median_offset_ns = round(
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+ device.estimate_time_offset().time_offset_ms.median * 1_000_000
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+ )
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+ offset_std = round(device.estimate_time_offset().time_offset_ms.std * 1_000_000)
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+ logging.info(
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+ f"Estimated Pupil Labs device time offset (ns) = {median_offset_ns} ± {offset_std} (median ± std)"
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+ )
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+
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+ return device, median_offset_ns
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+ else:
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+ return None, None
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+
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+
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+ def send_event_to_pupil_labs(device: Device, event_string: str, clock_offset_ns: int):
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+ """
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+ Send an event to the Pupil Labs device with a timestamp.
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+
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+ Parameters
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+ ----------
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+ device : Device
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+ The connected Pupil Labs device.
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+ event_string : str
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+ The event description to send.
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+ clock_offset_ns : int
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+ The clock offset in nanoseconds to adjust the event timestamp.
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+ """
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+ if device is not None:
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+ device.send_event(
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+ event_string,
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+ event_timestamp_unix_ns=int(time_ns() - clock_offset_ns),
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+ )
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+
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+
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+ if __name__ == "__main__":
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+ logging.console.setLevel(logging.INFO)
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+ device, offset_ns = get_pupil_labs_device()
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+ if device is not None:
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+ device.close()
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+ Metadata-Version: 2.4
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+ Name: pbl-exp
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+ Version: 0.1
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+ Summary: Helper functions for running experiments at the Predictive Brain Lab (Bochum)
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+ Author-email: Qian Chu <qianchu99@gmail.com>
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+ Requires-Python: >=3.10
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+ Description-Content-Type: text/markdown
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+ License-File: LICENSE
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+ Requires-Dist: psychopy
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+ Requires-Dist: pupil-labs-realtime-api
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+ Requires-Dist: sr-research-pylink
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+ Dynamic: license-file
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+
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+ # pbl-exp
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+
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+ .gitattributes
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+ .gitignore
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+ LICENSE
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+ README.md
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+ pyproject.toml
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+ .github/workflows/python-publish.yml
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+ demos/psychopy_and_pupil_labs.py
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+ src/PBL/exp/__init__.py
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+ src/PBL/exp/eyelink.py
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+ src/PBL/exp/psychopy.py
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+ src/PBL/exp/pupil_labs.py
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+ src/pbl_exp.egg-info/PKG-INFO
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+ src/pbl_exp.egg-info/SOURCES.txt
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+ src/pbl_exp.egg-info/dependency_links.txt
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+ src/pbl_exp.egg-info/requires.txt
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+ src/pbl_exp.egg-info/scm_file_list.json
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+ src/pbl_exp.egg-info/scm_version.json
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+ src/pbl_exp.egg-info/top_level.txt
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+ psychopy
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+ pupil-labs-realtime-api
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+ sr-research-pylink
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+ {
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+ "files": [
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+ ".gitattributes",
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+ ".github/workflows/python-publish.yml",
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+ ".gitignore",
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+ "LICENSE",
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+ "README.md",
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+ "demos/psychopy_and_pupil_labs.py",
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+ "pyproject.toml",
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+ "src/PBL/exp/__init__.py",
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+ "src/PBL/exp/eyelink.py",
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+ "src/PBL/exp/psychopy.py",
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+ "src/PBL/exp/pupil_labs.py"
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+ ]
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+ }
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+ {
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+ "tag": "0.1",
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+ "distance": 0,
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+ "node": "gb376e98382f28a811bf1d36ac7a8aa437eba381c",
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+ "dirty": false,
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+ "branch": "HEAD",
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+ "node_date": "2026-10-29"
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+ }
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+ PBL