passagemath-graphs 10.5.10__cp39-cp39-macosx_14_0_arm64.whl → 10.5.43__cp39-cp39-macosx_14_0_arm64.whl

{passagemath_graphs-10.5.10.dist-info → passagemath_graphs-10.5.43.dist-info}/METADATA

@@ -1,10 +1,10 @@
-Metadata-Version: 2.1
+Metadata-Version: 2.4
 Name: passagemath-graphs
-Version: 10.5.10
+Version: 10.5.43
 Summary: passagemath: Graphs, posets, hypergraphs, designs, abstract complexes, combinatorial polyhedra, abelian sandpiles, quivers
 Author-email: The Sage Developers <sage-support@googlegroups.com>
 Maintainer: Matthias Köppe, passagemath contributors
-License: GNU General Public License (GPL) v2 or later
+License-Expression: GPL-2.0-or-later
 Project-URL: release notes, https://github.com/passagemath/passagemath/releases
 Project-URL: repo (upstream), https://github.com/sagemath/sage
 Project-URL: repo, https://github.com/passagemath/passagemath
@@ -16,7 +16,6 @@ Project-URL: tracker, https://github.com/passagemath/passagemath/issues
 Classifier: Development Status :: 6 - Mature
 Classifier: Intended Audience :: Education
 Classifier: Intended Audience :: Science/Research
-Classifier: License :: OSI Approved :: GNU General Public License v2 or later (GPLv2+)
 Classifier: Operating System :: POSIX
 Classifier: Operating System :: MacOS :: MacOS X
 Classifier: Programming Language :: Python :: 3 :: Only
@@ -24,14 +23,16 @@ Classifier: Programming Language :: Python :: 3.9
 Classifier: Programming Language :: Python :: 3.10
 Classifier: Programming Language :: Python :: 3.11
 Classifier: Programming Language :: Python :: 3.12
+Classifier: Programming Language :: Python :: 3.13
 Classifier: Programming Language :: Python :: Implementation :: CPython
 Classifier: Topic :: Scientific/Engineering :: Mathematics
-Requires-Python: <3.13,>=3.9
+Requires-Python: <3.14,>=3.9
 Description-Content-Type: text/x-rst
 Requires-Dist: gmpy2~=2.1.b999
-Requires-Dist: cysignals==1.12.0rc2
+Requires-Dist: cysignals!=1.12.0,>=1.11.2
 Requires-Dist: memory_allocator
-Requires-Dist: passagemath-categories~=10.5.10.0
+Requires-Dist: passagemath-categories~=10.5.43.0
+Requires-Dist: passagemath-environment~=10.5.43.0
 Provides-Extra: test
 Requires-Dist: passagemath-repl; extra == "test"
 Provides-Extra: benzene
@@ -42,6 +43,8 @@ Provides-Extra: buckygen
 Requires-Dist: passagemath-buckygen; extra == "buckygen"
 Provides-Extra: cliquer
 Requires-Dist: passagemath-cliquer; extra == "cliquer"
+Provides-Extra: cmr
+Requires-Dist: passagemath-cmr; extra == "cmr"
 Provides-Extra: gap
 Requires-Dist: passagemath-gap; extra == "gap"
 Provides-Extra: igraph
@@ -68,6 +71,9 @@ Provides-Extra: combinat
 Requires-Dist: passagemath-combinat; extra == "combinat"
 Provides-Extra: editor
 Requires-Dist: phitigra>=0.2.6; extra == "editor"
+Provides-Extra: groups
+Requires-Dist: passagemath-groups; extra == "groups"
+Requires-Dist: passagemath-graphs[nauty]; extra == "groups"
 Provides-Extra: homology
 Requires-Dist: passagemath-modules; extra == "homology"
 Provides-Extra: mip
@@ -83,33 +89,59 @@ Requires-Dist: passagemath-repl; extra == "repl"
 Provides-Extra: sat
 Requires-Dist: passagemath-combinat; extra == "sat"
 Provides-Extra: standard
-Requires-Dist: passagemath-graphs[combinat,databases,mip,modules,planarity,plot,polyhedra,rankwidth,repl]; extra == "standard"
+Requires-Dist: passagemath-graphs[combinat,databases,groups,mip,modules,planarity,polyhedra,rankwidth,repl]; extra == "standard"
+Requires-Dist: passagemath-plot[tachyon]; extra == "standard"
 
 =======================================================================================================================================================
  passagemath: Graphs, posets, hypergraphs, designs, abstract complexes, combinatorial polyhedra, abelian sandpiles, quivers
 =======================================================================================================================================================
 
-About SageMath
---------------
-
-   "Creating a Viable Open Source Alternative to
-    Magma, Maple, Mathematica, and MATLAB"
-
-   Copyright (C) 2005-2024 The Sage Development Team
-
-   https://www.sagemath.org
-
-SageMath fully supports all major Linux distributions, recent versions of
-macOS, and Windows (Windows Subsystem for Linux).
-
-See https://doc.sagemath.org/html/en/installation/index.html
-for general installation instructions.
+`passagemath <https://github.com/passagemath/passagemath>`__ is open
+source mathematical software in Python, released under the GNU General
+Public Licence GPLv2+.
+
+It is a fork of `SageMath <https://www.sagemath.org/>`__, which has been
+developed 2005-2025 under the motto “Creating a Viable Open Source
+Alternative to Magma, Maple, Mathematica, and MATLAB”.
+
+The passagemath fork was created in October 2024 with the following
+goals:
+
+-  providing modularized installation with pip, thus completing a `major
+   project started in 2020 in the Sage
+   codebase <https://github.com/sagemath/sage/issues/29705>`__,
+-  establishing first-class membership in the scientific Python
+   ecosystem,
+-  giving `clear attribution of upstream
+   projects <https://groups.google.com/g/sage-devel/c/6HO1HEtL1Fs/m/G002rPGpAAAJ>`__,
+-  providing independently usable Python interfaces to upstream
+   libraries,
+-  providing `platform portability and integration testing
+   services <https://github.com/passagemath/passagemath/issues/704>`__
+   to upstream projects,
+-  inviting collaborations with upstream projects,
+-  `building a professional, respectful, inclusive
+   community <https://groups.google.com/g/sage-devel/c/xBzaINHWwUQ>`__,
+-  developing a port to `Pyodide <https://pyodide.org/en/stable/>`__ for
+   serverless deployment with Javascript,
+-  developing a native Windows port.
+
+`Full documentation <https://doc.sagemath.org/html/en/index.html>`__ is
+available online.
+
+passagemath attempts to support all major Linux distributions and recent versions of
+macOS. Use on Windows currently requires the use of Windows Subsystem for Linux or
+virtualization.
+
+Complete sets of binary wheels are provided on PyPI for Python versions 3.9.x-3.12.x.
+Python 3.13.x is also supported, but some third-party packages are still missing wheels,
+so compilation from source is triggered for those.
 
 
 About this pip-installable distribution package
 -----------------------------------------------
 
-This pip-installable package `passagemath-graphs` is a distribution of a part of the Sage Library.  It provides a small subset of the modules of the Sage library ("sagelib", `sagemath-standard`) for computations with graphs, posets, complexes, etc.
+This pip-installable package `passagemath-graphs` is a distribution of a part of the Sage Library.  It provides a small subset of the modules of the Sage library ("sagelib", `passagemath-standard`) for computations with graphs, posets, complexes, etc.
 
 It consists of over 170 first-party Python and Cython modules and uses the `Boost Graph Library <https://github.com/boostorg/graph>`_, with additional functionality from `NetworkX <https://networkx.github.io/>`_ and several other libraries.
 
@@ -156,32 +188,96 @@ A quick way to try it out interactively::
 Available as extras, from other distributions
 ---------------------------------------------
 
+Libraries
+~~~~~~~~~
+
+``pip install passagemath-graphs[benzene,buckygen,plantri]`` additionally make
+various graph generators available via `passagemath-benzene <https://pypi.org/project/passagemath-benzene/>`_, `passagemath-buckygen <https://pypi.org/project/passagemath-buckygen/>`_, and `passagemath-plantri <https://pypi.org/project/passagemath-plantri/>`_.
+
+``pip install passagemath-graphs[bliss]`` additionally installs `passagemath-bliss <https://pypi.org/project/passagemath-bliss/>`_ for the purpose
+of computing graph (iso/auto)morphisms.
+
+``pip install passagemath-graphs[cliquer]`` additionally installs `passagemath-cliquer <https://pypi.org/project/passagemath-cliquer/>`_
+
+``pip install passagemath-graphs[cmr]`` additionally installs `passagemath-cmr <https://pypi.org/project/passagemath-cmr/>`_ for recognition and decomposition algorithms
+for network matrices, totally unimodular matrices and regular matroids, series-parallel matroids, etc.
+
+``pip install passagemath-graphs[gap]`` additionally installs `passagemath-gap <https://pypi.org/project/passagemath-gap/>`_ for group-theoretic functionality.
+
+``pip install passagemath-graphs[igraph]`` additionally installs
+`igraph <https://python.igraph.org/en/stable/>`_::
+
+    $ pipx run --pip-args="--prefer-binary" --spec "passagemath-graphs[igraph,test]" ipython
+    In [1]: from sage.all__sagemath_graphs import *
+
+    In [2]: ## Example depending on igraph goes here
+
+``pip install passagemath-graphs[mcqd]`` additionally installs `passagemath-mcqd <https://pypi.org/project/passagemath-mcqd/>`_
+
+``pip install passagemath-graphs[nauty]`` additionally installs `passagemath-nauty <https://pypi.org/project/passagemath-nauty/>`_ for computing
+automorphism groups of graphs and digraphs.
+
 ``pip install passagemath-graphs[networkx]`` additionally installs
-`NetworkX <https://networkx.github.io>`::
+`NetworkX <https://networkx.github.io>`__::
 
     $ pipx run --pip-args="--prefer-binary" --spec "passagemath-graphs[networkx,test]" ipython
     In [1]: from sage.all__sagemath_graphs import *
 
     In [2]: ## Example depending on networkx goes here
 
+``pip install passagemath-graphs[pari]`` additionally installs `passagemath-pari <https://pypi.org/project/passagemath-pari/>`_
 
-``pip install passagemath-graphs[igraph]`` additionally installs
-`igraph <https://python.igraph.org/en/stable/>`::
+``pip install passagemath-graphs[planarity]`` additionally installs `passagemath-planarity <https://pypi.org/project/passagemath-planarity/>`_ for planarity testing.
 
-    $ pipx run --pip-args="--prefer-binary" --spec "passagemath-graphs[igraph,test]" ipython
+``pip install passagemath-graphs[rankwidth]`` additionally installs `passagemath-rankwidth <https://pypi.org/project/passagemath-rankwidth/>`_ for rank width and rank decompositions.
+
+``pip install passagemath-graphs[tdlib]`` additionally installs `passagemath-tdlib <https://pypi.org/project/passagemath-tdlib/>`_ for computing tree decompositions.
+
+
+Features
+~~~~~~~~
+
+``pip install passagemath-graphs[combinat]`` additionally installs `passagemath-combinat <https://pypi.org/project/passagemath-combinat/>`_
+
+``pip install passagemath-graphs[editor]`` additionally installs the interactive graph editor `phitigra <https://pypi.org/project/phitigra/>`_.
+
+``pip install passagemath-graphs[groups]`` additionally makes group-theoretic features
+available via `passagemath-gap <https://pypi.org/project/passagemath-gap/>`_, `passagemath-groups <https://pypi.org/project/passagemath-groups/>`_, and `passagemath-nauty <https://pypi.org/project/passagemath-nauty/>`_::
+
+    $ pipx run --pip-args="--prefer-binary" --spec "passagemath-graphs[groups,test]" ipython
     In [1]: from sage.all__sagemath_graphs import *
 
-    In [2]: ## Example depending on igraph goes here
+    In [2]: g = Graph({
+                0: [1, 2],
+                1: [0, 2],
+                2: [0, 1, 3],
+                3: [2]
+            })
+
+    In [3]: aut = g.automorphism_group()
+
+    In [4]: print(aut.order())
 
+``pip install passagemath-graphs[homology]`` provides homological computations for abstract complexes via `passagemath-modules <https://pypi.org/project/passagemath-modules/>`_.
 
 ``pip install passagemath-graphs[mip]`` additionally makes the mixed-integer programming
-solver GLPK available::
+solver GLPK available via `passagemath-glpk <https://pypi.org/project/passagemath-glpk/>`_ and `passagemath-polyhedra <https://pypi.org/project/passagemath-polyhedra/>`_ (see there for other available solvers).::
 
     $ pipx run --pip-args="--prefer-binary" --spec "passagemath-graphs[mip,test]" ipython
     In [1]: from sage.all__sagemath_graphs import *
 
     In [2]: ## Example depending on MIP goes here
 
+``pip install passagemath-graphs[modules]`` additionally makes linear algebra features available via `passagemath-modules <https://pypi.org/project/passagemath-modules/>`_.
+
+``pip install passagemath-graphs[plot]`` additionally installs `passagemath-plot <https://pypi.org/project/passagemath-plot/>`_.
+
+``pip install passagemath-graphs[polyhedra]`` additionally installs `passagemath-polyhedra <https://pypi.org/project/passagemath-polyhedra/>`_.
+
+``pip install passagemath-graphs[sat]`` additionally provides SAT features via `passagemath-combinat <https://pypi.org/project/passagemath-combinat/>`_.
+
+``pip install passagemath-graphs[standard]`` installs all libraries and features related to graphs that
+are available in a standard installation of Sage.
 
 
 Development

passagemath_graphs-10.5.43.dist-info/RECORD

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{passagemath_graphs-10.5.10.dist-info → passagemath_graphs-10.5.43.dist-info}/WHEEL

@@ -1,5 +1,6 @@
 Wheel-Version: 1.0
-Generator: setuptools (75.6.0)
+Generator: setuptools (80.9.0)
 Root-Is-Purelib: false
 Tag: cp39-cp39-macosx_14_0_arm64
+Generator: delocate 0.13.0
 

sage/all__sagemath_graphs.py

@@ -11,6 +11,11 @@ This distribution makes the following feature available::
 
 from .all__sagemath_categories import *
 
+try:  # extra
+    from sage.all__sagemath_gap import *
+except ImportError:
+    pass
+
 try:  # extra
     from sage.all__sagemath_modules import *
 except ImportError:

sage/combinat/abstract_tree.py

@@ -1,6 +1,6 @@
 # sage_setup: distribution = sagemath-graphs
 r"""
-Abstract Recursive Trees
+Abstract recursive trees
 
 The purpose of this class is to help implement trees with a specific structure
 on the children of each node. For instance, one could want to define a tree in

sage/combinat/binary_tree.py

@@ -1,6 +1,6 @@
 # sage_setup: distribution = sagemath-graphs
 """
-Binary Trees
+Binary trees
 
 This module deals with binary trees as mathematical (in particular immutable)
 objects.

sage/combinat/cluster_algebra_quiver/all.py

@@ -2,7 +2,7 @@
 r"""
 Cluster algebras and quivers
 
-- A compendium on the cluster algebra and quiver package in Sage [MS2011]_
+A compendium on the cluster algebra and quiver package in Sage [MS2011]_
 
 - :ref:`sage.combinat.cluster_algebra_quiver.quiver_mutation_type`
 - :ref:`sage.combinat.cluster_algebra_quiver.quiver`