parq-cli 0.2.1__tar.gz → 0.2.2__tar.gz

{parq_cli-0.2.1 → parq_cli-0.2.2}/.gitignore

@@ -210,3 +210,6 @@ project_document/
 .history/
 .worktrees/
 worktrees/
+
+# macOS
+.DS_Store

{parq_cli-0.2.1 → parq_cli-0.2.2}/CHANGELOG.md

@@ -1,5 +1,13 @@
 # Changelog
 
+## 0.2.2
+
+- `merge --force` and `convert` now refuse an output path that is one of the inputs. Previously `--force` deleted that input before reading it.
+- XLSX workbook XML is parsed with `defusedxml` (added to the `xlsx` extra).
+- Table output escapes cell markup and summarizes binary values (#4).
+- Errors include the file path (#5).
+- Dependency security updates: certifi, urllib3, idna, pygments, cryptography, pyarrow.
+
 ## 0.2.1
 
 - `diff` and `merge` honor the global `--delimiter` and `--sheet` options.

{parq_cli-0.2.1 → parq_cli-0.2.2}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.5
 Name: parq-cli
-Version: 0.2.1
+Version: 0.2.2
 Summary: A command-line tool for inspecting tabular files: Parquet, CSV, TSV, and XLSX
 Project-URL: Homepage, https://github.com/Tendo33/parq-cli
 Project-URL: Repository, https://github.com/Tendo33/parq-cli
@@ -26,10 +26,11 @@ Provides-Extra: dev
 Requires-Dist: build>=1.2.0; extra == 'dev'
 Requires-Dist: pytest-cov>=4.1.0; extra == 'dev'
 Requires-Dist: pytest>=8.0.0; extra == 'dev'
-Requires-Dist: ruff>=0.7.0; extra == 'dev'
+Requires-Dist: ruff==0.14.0; extra == 'dev'
 Requires-Dist: twine>=5.1.0; extra == 'dev'
 Requires-Dist: vulture>=2.14; extra == 'dev'
 Provides-Extra: xlsx
+Requires-Dist: defusedxml>=0.7.1; extra == 'xlsx'
 Requires-Dist: openpyxl>=3.1.0; extra == 'xlsx'
 Requires-Dist: python-calamine>=0.8.0; extra == 'xlsx'
 Description-Content-Type: text/markdown

{parq_cli-0.2.1 → parq_cli-0.2.2}/parq/cli.py

@@ -129,18 +129,20 @@ def _run_with_error_handling(
     operation: Callable[[Any], None],
     *,
     generic_error_prefix: str,
+    file_path: Optional[Path] = None,
 ) -> None:
     """Execute a CLI operation with consistent error handling."""
+    path_text = str(file_path) if file_path is not None else None
     formatter = _get_formatter(ctx)
     try:
         operation(formatter)
     except typer.Exit:
         raise
     except (FileNotFoundError, ValueError, FileExistsError) as e:
-        formatter.print_error(str(e))
+        formatter.print_error(str(e), file_path=path_text)
         raise typer.Exit(code=1) from e
     except Exception as e:
-        formatter.print_error(f"{generic_error_prefix}: {e}")
+        formatter.print_error(f"{generic_error_prefix}: {e}", file_path=path_text)
         raise typer.Exit(code=1) from e
 
 
@@ -208,7 +210,9 @@ def meta(
         reader = _get_reader(str(file), _get_state(ctx))
         formatter.print_metadata(reader.get_metadata_dict(fast=fast))
 
-    _run_with_error_handling(ctx, operation, generic_error_prefix="Failed to read file")
+    _run_with_error_handling(
+        ctx, operation, generic_error_prefix="Failed to read file", file_path=file
+    )
 
 
 @app.command()
@@ -226,7 +230,9 @@ def schema(
         reader = _get_reader(str(file), _get_state(ctx))
         formatter.print_schema(reader.get_schema_info())
 
-    _run_with_error_handling(ctx, operation, generic_error_prefix="Failed to read file")
+    _run_with_error_handling(
+        ctx, operation, generic_error_prefix="Failed to read file", file_path=file
+    )
 
 
 @app.command()
@@ -250,7 +256,9 @@ def head(
         table = reader.read_head(n, columns=_parse_column_list(columns))
         formatter.print_table(table, f"First {n} Rows")
 
-    _run_with_error_handling(ctx, operation, generic_error_prefix="Failed to read file")
+    _run_with_error_handling(
+        ctx, operation, generic_error_prefix="Failed to read file", file_path=file
+    )
 
 
 @app.command()
@@ -274,7 +282,9 @@ def tail(
         table = reader.read_tail(n, columns=_parse_column_list(columns))
         formatter.print_table(table, f"Last {n} Rows")
 
-    _run_with_error_handling(ctx, operation, generic_error_prefix="Failed to read file")
+    _run_with_error_handling(
+        ctx, operation, generic_error_prefix="Failed to read file", file_path=file
+    )
 
 
 @app.command()
@@ -292,7 +302,9 @@ def count(
         reader = _get_reader(str(file), _get_state(ctx))
         formatter.print_count(reader.num_rows)
 
-    _run_with_error_handling(ctx, operation, generic_error_prefix="Failed to read file")
+    _run_with_error_handling(
+        ctx, operation, generic_error_prefix="Failed to read file", file_path=file
+    )
 
 
 @app.command()
@@ -397,10 +409,10 @@ def split(
     except typer.Exit:
         raise
     except (FileNotFoundError, ValueError, FileExistsError) as e:
-        formatter.print_error(str(e))
+        formatter.print_error(str(e), file_path=str(file))
         raise typer.Exit(code=1) from e
     except Exception as e:
-        formatter.print_error(f"Failed to split file: {e}")
+        formatter.print_error(f"Failed to split file: {e}", file_path=str(file))
         raise typer.Exit(code=1) from e
 
 
@@ -430,7 +442,9 @@ def stats(
             reader.get_stats(columns=_parse_column_list(columns), limit=limit, top_n=top_n)
         )
 
-    _run_with_error_handling(ctx, operation, generic_error_prefix="Failed to compute stats")
+    _run_with_error_handling(
+        ctx, operation, generic_error_prefix="Failed to compute stats", file_path=file
+    )
 
 
 @app.command()
@@ -511,10 +525,10 @@ def convert(
     except typer.Exit:
         raise
     except (FileNotFoundError, ValueError, FileExistsError) as e:
-        formatter.print_error(str(e))
+        formatter.print_error(str(e), file_path=str(source))
         raise typer.Exit(code=1) from e
     except Exception as e:
-        formatter.print_error(f"Failed to convert file: {e}")
+        formatter.print_error(f"Failed to convert file: {e}", file_path=str(source))
         raise typer.Exit(code=1) from e
 
 

{parq_cli-0.2.1 → parq_cli-0.2.2}/parq/formats/_common.py

@@ -218,7 +218,7 @@ def _compute_stats_from_batches(
                 values_list = vc.field("values").to_pylist()
                 counts_list = vc.field("counts").to_pylist()
                 value_counts = state["_value_counts"]
-                for value, count in zip(values_list, counts_list):
+                for value, count in zip(values_list, counts_list, strict=True):
                     if value is None:
                         continue
                     key = str(value)

{parq_cli-0.2.1 → parq_cli-0.2.2}/parq/formats/_xlsx.py

@@ -6,7 +6,6 @@ Reading uses python-calamine. Writing stays on openpyxl in the chunk writer.
 
 import math
 import zipfile
-import xml.etree.ElementTree as ET
 from datetime import date, datetime, time
 from pathlib import Path
 from typing import Any, Iterator, List, Optional
@@ -46,8 +45,22 @@ def _require_calamine() -> Any:
     return python_calamine
 
 
+def _require_defused_element_tree() -> Any:
+    """Import defusedxml lazily; workbook XML is untrusted input."""
+    try:
+        import defusedxml.ElementTree as defused_et
+    except ImportError as e:
+        raise ValueError(
+            "XLSX support requires 'defusedxml'. Install it with: pip install 'parq-cli[xlsx]'"
+        ) from e
+    return defused_et
+
+
 def _active_sheet_index(file_path: Path) -> int:
     """Return the workbook's active sheet index without parsing every cell."""
+    ET = _require_defused_element_tree()
+    from defusedxml import DefusedXmlException
+
     try:
         with zipfile.ZipFile(file_path) as workbook_zip:
             root = ET.fromstring(workbook_zip.read("xl/workbook.xml"))
@@ -55,7 +68,14 @@ def _active_sheet_index(file_path: Path) -> int:
         if view is None:
             return 0
         return int(view.attrib.get("activeTab", "0"))
-    except (KeyError, ValueError, ET.ParseError, zipfile.BadZipFile, OSError):
+    except (
+        KeyError,
+        ValueError,
+        ET.ParseError,
+        DefusedXmlException,
+        zipfile.BadZipFile,
+        OSError,
+    ):
         return 0
 
 
@@ -172,7 +192,7 @@ def _schema_from_types(headers: List[str], inferred_types: List[Optional[pa.Data
     return pa.schema(
         [
             pa.field(name, inferred_type or pa.null(), nullable=True)
-            for name, inferred_type in zip(headers, inferred_types)
+            for name, inferred_type in zip(headers, inferred_types, strict=True)
         ]
     )
 
@@ -275,7 +295,7 @@ def _iter_row_batches(
                     row[idx] if idx < len(row) else None,
                     field,
                 )
-                for column, idx, field in zip(selected_columns, selected_indices, selected_fields)
+                for column, idx, field in zip(selected_columns, selected_indices, selected_fields, strict=True)
             }
         )
         if len(buffered_rows) >= batch_size:

{parq_cli-0.2.1 → parq_cli-0.2.2}/parq/output.py

@@ -5,14 +5,17 @@ Handles pretty-printing of Parquet data and metadata.
 
 import sys
 from pathlib import Path
-from typing import Any, Dict, List
+from typing import Any, Dict, List, Optional
 
 import pyarrow as pa
 from rich import box
 from rich.console import Console
+from rich.markup import escape
 from rich.panel import Panel
 from rich.table import Table
 
+from parq.plain_output import summarize_binary as _summarize_cell
+
 console = Console()
 
 
@@ -37,6 +40,17 @@ def _safe_text(text: str, fallback: str) -> str:
     return text if _supports_text(text) else fallback
 
 
+_MAX_CELL_CHARS = 200
+
+
+def _format_cell(value: Any) -> str:
+    """Render a table cell as markup-safe, length-limited text."""
+    text = str(_summarize_cell(value))
+    if len(text) > _MAX_CELL_CHARS:
+        text = text[: _MAX_CELL_CHARS - 3] + "..."
+    return escape(text)
+
+
 class OutputFormatter:
     """Formatter for displaying tabular data and metadata."""
 
@@ -123,7 +137,10 @@ class OutputFormatter:
             batch_dict = batch.to_pydict()
             for row_idx in range(len(batch)):
                 table.add_row(
-                    *[str(batch_dict[col_name][row_idx]) for col_name in arrow_table.column_names]
+                    *[
+                        _format_cell(batch_dict[col_name][row_idx])
+                        for col_name in arrow_table.column_names
+                    ]
                 )
 
         console.print(table)
@@ -140,10 +157,12 @@ class OutputFormatter:
         console.print(panel)
 
     @staticmethod
-    def print_error(message: str) -> None:
-        """Print error message."""
+    def print_error(message: str, file_path: Optional[str] = None) -> None:
+        """Print error message, prefixed with the offending file when known."""
+        if file_path and file_path not in message:
+            message = f"{file_path}: {message}"
         console.print(
-            f"[bold red]{_safe_text(chr(0x274C) + ' Error:', 'Error:')}[/bold red] {message}"
+            f"[bold red]{_safe_text(chr(0x274C) + ' Error:', 'Error:')}[/bold red] {escape(message)}"
         )
 
     @staticmethod

{parq_cli-0.2.1 → parq_cli-0.2.2}/parq/plain_output.py

@@ -4,11 +4,24 @@ import csv
 import json
 import sys
 from pathlib import Path
-from typing import Any, Dict, List
+from typing import Any, Dict, List, Optional
 
 import pyarrow as pa
 
 
+def summarize_binary(value: Any) -> Any:
+    """Replace raw binary payloads (also inside structs/lists) with a short summary."""
+    if isinstance(value, (bytes, bytearray, memoryview)):
+        return f"<binary {len(bytes(value))} bytes>"
+    if isinstance(value, dict):
+        return {key: summarize_binary(item) for key, item in value.items()}
+    if isinstance(value, list):
+        return [summarize_binary(item) for item in value]
+    if isinstance(value, tuple):
+        return tuple(summarize_binary(item) for item in value)
+    return value
+
+
 class PlainOutputFormatter:
     """Tab-separated plain text output with minimal overhead."""
 
@@ -20,6 +33,10 @@ class PlainOutputFormatter:
     def _normalize_value(value: Any) -> Any:
         if value is None:
             return ""
+        if isinstance(value, (bytes, bytearray, memoryview, dict, list, tuple)):
+            value = summarize_binary(value)
+            if not isinstance(value, str):
+                value = str(value)
         if isinstance(value, str):
             return (
                 value.replace("\\", "\\\\")
@@ -68,7 +85,9 @@ class PlainOutputFormatter:
         print(count)
 
     @staticmethod
-    def print_error(message: str) -> None:
+    def print_error(message: str, file_path: Optional[str] = None) -> None:
+        if file_path and file_path not in message:
+            message = f"{file_path}: {message}"
         print(f"Error: {message}", file=sys.stderr)
 
     @staticmethod
@@ -191,8 +210,11 @@ class JsonOutputFormatter:
         print(json.dumps({"count": count}))
 
     @staticmethod
-    def print_error(message: str) -> None:
-        print(json.dumps({"error": message}), file=sys.stderr)
+    def print_error(message: str, file_path: Optional[str] = None) -> None:
+        payload: Dict[str, Any] = {"error": message}
+        if file_path is not None:
+            payload["file_path"] = file_path
+        print(json.dumps(payload), file=sys.stderr)
 
     @staticmethod
     def print_success(message: str) -> None:

{parq_cli-0.2.1 → parq_cli-0.2.2}/parq/reader.py

@@ -419,8 +419,9 @@ class MultiFormatReader:
         progress_callback: Optional[Callable[[int, int], None]] = None,
     ) -> int:
         """Convert the input file to a single supported output file."""
-        self._ensure_xlsx_types_for_full_read()
         output_path = Path(output_path)
+        _reject_output_matching_input(output_path, [self.file_path])
+        self._ensure_xlsx_types_for_full_read()
         if self._parquet_reader is not None:
             rows_written = self._parquet_reader.convert_file(
                 output_path, columns=columns, force=force, progress_callback=progress_callback
@@ -921,6 +922,21 @@ def diff_files(
     }
 
 
+def _reject_output_matching_input(
+    output_path: Path, input_paths: List[Union[str, Path]]
+) -> None:
+    """Refuse to write onto an input file (``--force`` would delete it first)."""
+    if not output_path.exists():
+        return
+    for input_path in input_paths:
+        try:
+            same = output_path.samefile(input_path)
+        except OSError:
+            continue
+        if same:
+            raise ValueError(f"Output file must not be one of the inputs: {output_path}")
+
+
 def merge_files(
     input_paths: List[Union[str, Path]],
     output_path: Union[str, Path],
@@ -934,6 +950,7 @@ def merge_files(
         raise ValueError("At least one input file must be provided")
 
     output_path = Path(output_path)
+    _reject_output_matching_input(output_path, input_paths)
     if output_path.exists():
         if force:
             output_path.unlink()

{parq_cli-0.2.1 → parq_cli-0.2.2}/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "parq-cli"
-version = "0.2.1"
+version = "0.2.2"
 description = "A command-line tool for inspecting tabular files: Parquet, CSV, TSV, and XLSX"
 readme = "README.md"
 requires-python = ">=3.10"
@@ -38,12 +38,13 @@ parq = "parq.cli:app"
 xlsx = [
     "openpyxl>=3.1.0",
     "python-calamine>=0.8.0",
+    "defusedxml>=0.7.1",
 ]
 dev = [
     "build>=1.2.0",
     "pytest>=8.0.0",
     "pytest-cov>=4.1.0",
-    "ruff>=0.7.0",
+    "ruff==0.14.0",
     "twine>=5.1.0",
     "vulture>=2.14",
 ]

{parq_cli-0.2.1 → parq_cli-0.2.2}/tests/test_cli.py

@@ -2,6 +2,7 @@
 Tests for CLI commands.
 """
 
+import json
 import os
 import subprocess
 import sys
@@ -808,3 +809,27 @@ class TestCLI:
         assert "--output" in plain
         assert "--delimiter" in plain
         assert "--sheet" in plain
+
+
+def test_json_error_includes_file_path(tmp_path):
+    """Errors in JSON mode carry the offending file path (issue #5)."""
+    bad = tmp_path / "broken.parquet"
+    bad.write_bytes(b"not a parquet file")
+
+    result = runner.invoke(app, ["-o", "json", "meta", str(bad)])
+
+    assert result.exit_code == 1
+    payload = json.loads(result.stderr.strip().splitlines()[-1])
+    assert payload["file_path"] == str(bad)
+    assert "error" in payload
+
+
+def test_text_error_mentions_file_path(tmp_path):
+    """Errors in plain mode mention the offending file path (issue #5)."""
+    bad = tmp_path / "broken.parquet"
+    bad.write_bytes(b"not a parquet file")
+
+    result = runner.invoke(app, ["-o", "plain", "head", str(bad)])
+
+    assert result.exit_code == 1
+    assert str(bad) in result.stderr

{parq_cli-0.2.1 → parq_cli-0.2.2}/tests/test_output.py

@@ -73,3 +73,36 @@ def test_print_split_result_renders_existing_files(monkeypatch, tmp_path):
     assert "Output Files" in text
     assert "5 B" in text
     assert "part-001.parquet" not in text
+
+
+def test_print_table_handles_binary_values(monkeypatch):
+    """Binary cells (issue #4) must not be parsed as Rich markup or dumped in full."""
+    import pyarrow as pa
+
+    console = _recording_console()
+    monkeypatch.setattr(output_module, "console", console)
+    payload = b"\x87[/<\x97\xf6]" * 100
+    table = pa.table(
+        {
+            "raw": pa.array([payload], type=pa.binary()),
+            "image": pa.array([{"bytes": payload, "path": "a.png"}]),
+            "label": ["[/bold]"],
+        }
+    )
+
+    OutputFormatter.print_table(table)
+
+    text = console.export_text()
+    assert "<binary 700 bytes>" in text
+    assert "a.png" in text
+    assert "[/bold]" in text
+
+
+def test_print_error_escapes_markup(monkeypatch):
+    """Error messages containing Rich-like tags are printed literally."""
+    console = _recording_console()
+    monkeypatch.setattr(output_module, "console", console)
+
+    OutputFormatter.print_error("closing tag '[/<x]' at position 3")
+
+    assert "[/<x]" in console.export_text()

parq_cli-0.2.2/tests/test_output_not_input.py

@@ -0,0 +1,26 @@
+import pyarrow as pa
+import pyarrow.csv as pacsv
+import pytest
+
+from parq.reader import MultiFormatReader, merge_files
+
+
+def test_merge_force_refuses_to_overwrite_an_input(tmp_path):
+    left = tmp_path / "a.csv"
+    right = tmp_path / "b.csv"
+    pacsv.write_csv(pa.table({"id": [1]}), left)
+    pacsv.write_csv(pa.table({"id": [2]}), right)
+
+    with pytest.raises(ValueError, match="must not be one of the inputs"):
+        merge_files([left, right], left, force=True)
+    # The input must survive (previously --force unlinked it before reading).
+    assert pacsv.read_csv(left).num_rows == 1
+
+
+def test_convert_force_refuses_to_overwrite_its_input(tmp_path):
+    src = tmp_path / "a.csv"
+    pacsv.write_csv(pa.table({"id": [1, 2]}), src)
+
+    with pytest.raises(ValueError, match="must not be one of the inputs"):
+        MultiFormatReader(str(src)).convert_file(src, force=True)
+    assert pacsv.read_csv(src).num_rows == 2

{parq_cli-0.2.1 → parq_cli-0.2.2}/tests/test_plain_output.py

@@ -56,3 +56,21 @@ class TestJsonOutputFormatter:
         data = json.loads(capsys.readouterr().out)
         assert len(data["rows"]) == 2
         assert data["rows"][0]["id"] == 1
+
+
+def test_plain_table_summarizes_binary_values(capsys):
+    """Binary cells (issue #4) are summarized instead of dumped in plain mode."""
+    import pyarrow as pa
+
+    payload = b"\x00\x01[/x]" * 10
+    table = pa.table(
+        {
+            "raw": pa.array([payload], type=pa.binary()),
+            "image": pa.array([{"bytes": payload, "path": "a.png"}]),
+        }
+    )
+    PlainOutputFormatter.print_table(table)
+    out = capsys.readouterr().out
+    assert "<binary 60 bytes>" in out
+    assert "a.png" in out
+    assert "\\x00" not in out

parq_cli-0.2.2/tests/test_xlsx_defused.py

@@ -0,0 +1,31 @@
+import zipfile
+
+import pytest
+
+pytest.importorskip("defusedxml")
+
+from parq.formats._xlsx import _active_sheet_index  # noqa: E402
+
+_NS = "http://schemas.openxmlformats.org/spreadsheetml/2006/main"
+
+
+def _workbook(tmp_path, workbook_xml: str):
+    path = tmp_path / "book.xlsx"
+    with zipfile.ZipFile(path, "w") as zf:
+        zf.writestr("xl/workbook.xml", workbook_xml)
+    return path
+
+
+def test_active_sheet_index_reads_active_tab(tmp_path):
+    xml = f'<workbook xmlns="{_NS}"><bookViews><workbookView activeTab="2"/></bookViews></workbook>'
+    assert _active_sheet_index(_workbook(tmp_path, xml)) == 2
+
+
+def test_active_sheet_index_rejects_entity_expansion(tmp_path):
+    xml = (
+        '<?xml version="1.0"?>'
+        '<!DOCTYPE workbook [<!ENTITY a "1"><!ENTITY b "&a;&a;&a;&a;&a;&a;&a;&a;">]>'
+        f'<workbook xmlns="{_NS}"><bookViews><workbookView activeTab="&b;"/></bookViews></workbook>'
+    )
+    # defusedxml refuses entity declarations; we fall back to the first sheet.
+    assert _active_sheet_index(_workbook(tmp_path, xml)) == 0

{parq_cli-0.2.1 → parq_cli-0.2.2}/uv.lock

@@ -29,11 +29,11 @@ wheels = [
 
 [[package]]
 name = "certifi"
-version = "2026.2.25"
+version = "2026.10.23"
 source = { registry = "https://pypi.org/simple" }
-sdist = { url = "https://files.pythonhosted.org/packages/af/2d/7bf41579a8986e348fa033a31cdd0e4121114f6bce2457e8876010b092dd/certifi-2026.2.25.tar.gz", hash = "sha256:e887ab5cee78ea814d3472169153c2d12cd43b14bd03329a39a9c6e2e80bfba7", size = 155029, upload-time = "2026-02-25T02:54:17.342Z" }
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