papyrus-scripts 2.1.2__tar.gz → 2.1.3__tar.gz

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Files changed (30) hide show
  1. {papyrus_scripts-2.1.2/src/papyrus_scripts.egg-info → papyrus_scripts-2.1.3}/PKG-INFO +1 -1
  2. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/__init__.py +1 -1
  3. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/download.py +4 -4
  4. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3/src/papyrus_scripts.egg-info}/PKG-INFO +1 -1
  5. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/LICENSE +0 -0
  6. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/README.md +0 -0
  7. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/setup.cfg +0 -0
  8. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/setup.py +0 -0
  9. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/__main__.py +0 -0
  10. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/cli.py +0 -0
  11. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/fingerprint.py +0 -0
  12. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/matchRCSB.py +0 -0
  13. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/modelling.py +0 -0
  14. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/neuralnet.py +0 -0
  15. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/oop.py +0 -0
  16. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/preprocess.py +0 -0
  17. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/reader.py +0 -0
  18. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/subsim_search.py +0 -0
  19. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/utils/IO.py +0 -0
  20. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/utils/UniprotMatch.py +0 -0
  21. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/utils/__init__.py +0 -0
  22. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/utils/aliases.json +0 -0
  23. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/utils/links.json +0 -0
  24. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/utils/mol_reader.py +0 -0
  25. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts.egg-info/SOURCES.txt +0 -0
  26. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts.egg-info/dependency_links.txt +0 -0
  27. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts.egg-info/entry_points.txt +0 -0
  28. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts.egg-info/requires.txt +0 -0
  29. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts.egg-info/top_level.txt +0 -0
  30. {papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/tests/test_oop.py +0 -0
{papyrus_scripts-2.1.2/src/papyrus_scripts.egg-info → papyrus_scripts-2.1.3}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: papyrus_scripts
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- Version: 2.1.2
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+ Version: 2.1.3
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  Summary: A collection of scripts to handle the Papyrus bioactivity dataset
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  Home-page: https://github.com/OlivierBeq/Papyrus-scripts
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  Author: Olivier J. M. Béquignon - Brandon J. Bongers - Willem Jespers
{papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/__init__.py RENAMED
@@ -20,4 +20,4 @@ from .utils.IO import PapyrusVersion
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  from .oop import PapyrusDataset
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- __version__ = '2.1.2'
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+ __version__ = '2.1.3'
{papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/src/papyrus_scripts/download.py RENAMED
@@ -15,6 +15,9 @@ from .utils.IO import (get_disk_space, enough_disk_space, assert_sha256sum,
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  read_jsonfile, write_jsonfile, get_papyrus_links)
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+ USER_AGENT = "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_15_7) AppleWebKit/605.1.15 (KHTML, like Gecko) Version/17.0 Safari/605.1.15"
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+
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+
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  def download_papyrus(outdir: Optional[str] = None,
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  version: Union[str, List[str]] = 'latest',
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  nostereo: bool = True,
@@ -173,10 +176,7 @@ def download_papyrus(outdir: Optional[str] = None,
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  retries = RETRIES
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  while not correct and retries > 0: # Allow 3 failures
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  session = requests.session()
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- res = session.get(durl, headers={"User-Agent": "Mozilla/5.0 (Macintosh; Intel Mac OS X 10_10_1) "
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- "AppleWebKit/537.36 (KHTML, like Gecko) "
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- "Chrome/39.0.2171.95 "
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- "Safari/537.36"},
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+ res = session.get(durl, headers={"User-Agent": USER_AGENT},
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  stream=True, verify=True)
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  with open(fpath, 'wb') as fh:
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  for chunk in res.iter_content(chunk_size=CHUNKSIZE):
{papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3/src/papyrus_scripts.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: papyrus_scripts
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- Version: 2.1.2
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+ Version: 2.1.3
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  Summary: A collection of scripts to handle the Papyrus bioactivity dataset
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  Home-page: https://github.com/OlivierBeq/Papyrus-scripts
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  Author: Olivier J. M. Béquignon - Brandon J. Bongers - Willem Jespers
{papyrus_scripts-2.1.2 → papyrus_scripts-2.1.3}/LICENSE RENAMED
File without changes