orbitize 3.1.0__tar.gz → 3.2.2__tar.gz

{orbitize-3.1.0 → orbitize-3.2.2}/.github/workflows/python-package.yml

@@ -33,7 +33,7 @@ jobs:
     - name: Lint with flake8
       run: |
         # stop the build if there are Python syntax errors or undefined names
-        flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
+        flake8 . --count --select=E9,F63,F7,F82 --extend-ignore=F824 --show-source --statistics
         # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
         flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
     - name: Test with pytest

orbitize-3.2.2/PKG-INFO

@@ -0,0 +1,20 @@
+Metadata-Version: 2.4
+Name: orbitize
+Version: 3.2.2
+License-File: LICENSE
+Requires-Dist: numpy
+Requires-Dist: astropy>=4
+Requires-Dist: scipy
+Requires-Dist: emcee>=3
+Requires-Dist: ptemcee_for_orbitize
+Requires-Dist: matplotlib
+Requires-Dist: corner
+Requires-Dist: h5py
+Requires-Dist: deprecation
+Requires-Dist: pytest
+Requires-Dist: pandas
+Requires-Dist: pyerfa
+Requires-Dist: astroquery
+Requires-Dist: rebound
+Requires-Dist: dynesty
+Dynamic: license-file

{orbitize-3.1.0 → orbitize-3.2.2}/docs/index.rst

@@ -31,7 +31,7 @@ create an `issue on GitHub <https://github.com/sblunt/orbitize/issues>`_.
 Attribution:
 ++++++++++++
 
-* If you use ``orbitize`` in your work, please cite `Blunt et al (2019) <https://ui.adsabs.harvard.edu/abs/2019arXiv191001756B/abstract>`_.
+* If you use ``orbitize`` in your work, please cite `Blunt et al (2019) <https://ui.adsabs.harvard.edu/abs/2019arXiv191001756B/abstract>`_ and `Blunt et al (2024) <https://ui.adsabs.harvard.edu/abs/2024JOSS....9.6756B/abstract>`_
 * If you use the OFTI algorithm, please also cite `Blunt et al (2017) <https://ui.adsabs.harvard.edu/#abs/2017AJ....153..229B/abstract>`_. 
 * If you use the Affine-invariant MCMC algorithm from ``emcee``, please also cite `Foreman-Mackey et al (2013) <https://ui.adsabs.harvard.edu/abs/2013PASP..125..306F/abstract>`_. 
 * If you use the parallel-tempered Affine-invariant MCMC algorithm from ``ptemcee``, please also cite `Vousden et al (2016) <https://ui.adsabs.harvard.edu/abs/2016MNRAS.455.1919V/abstract>`_. 
@@ -54,6 +54,17 @@ User Guide:
 
 Changelog:
 ++++++++++
+**3.2.2 (2026-4-12)**
+
+- fix a few bugs causing unit test failures (#400) (@sblunt)
+
+**3.2.1 (2026-1-18)**
+
+- fix bug with install (#342) (@sblunt)
+
+**3.2.0 (2025-7-18)**
+
+- modernize install: setup.py -> pyproject.toml (@sblunt)
 
 **3.1.0 (2024-9-09)**
 

{orbitize-3.1.0 → orbitize-3.2.2}/docs/tutorials/Using_nonOrbitize_Posteriors_as_Priors.ipynb

@@ -450,7 +450,7 @@
     "            np.mean(tau_prior),\n",
     "            np.mean(m1_prior),\n",
     "        ]\n",
-    "    )\n",
+    "    )[0]\n",
     "    lnprior_arr2[idx_prior] = kde2.logpdf(\n",
     "        [\n",
     "            sma,\n",
@@ -460,7 +460,7 @@
     "            np.mean(tau_prior),\n",
     "            np.mean(m1_prior),\n",
     "        ]\n",
-    "    )\n",
+    "    )[0]\n",
     "\n",
     "plt.figure(100)\n",
     "plt.plot(sma_arr, lnprior_arr1, label=\"KDE BW = Default\")\n",
@@ -579,7 +579,7 @@
     "                np.mean(tau_prior),\n",
     "                np.mean(m1_prior),\n",
     "            ]\n",
-    "        )\n",
+    "        )[0]\n",
     "\n",
     "    # Quarentiles comparison\n",
     "    masskde_arr = kde.resample(len_pdf)[5, :]\n",
@@ -696,4 +696,4 @@
  },
  "nbformat": 4,
  "nbformat_minor": 2
-}
+}

{orbitize-3.1.0 → orbitize-3.2.2}/docs/tutorials/abs_astrometry.ipynb

@@ -83,19 +83,19 @@
     ")\n",
     "\n",
     "raoffs = np.zeros(num_datapoints)\n",
-    "deoffs = np.zeros(num_datapoints)\n",
+    "decoffs = np.zeros(num_datapoints)\n",
     "for i in range(num_datapoints):\n",
     "    my_data_coordinate = SkyCoord(datapoints[i], unit=(u.hourangle, u.deg))\n",
     "\n",
     "    # take difference between reported Hipparcos position and convert to mas\n",
-    "    raoff, deoff = hipparcos_coordinate.spherical_offsets_to(my_data_coordinate)\n",
+    "    raoff, decoff = hipparcos_coordinate.spherical_offsets_to(my_data_coordinate)\n",
     "\n",
     "    # n.b. orbitize! expects raw ra offsets, NOT multiplied by cos(delta0). Don't\n",
     "    # multiply by cos(delta0) here.\n",
     "    raoffs[i] = raoff.to(u.mas).value\n",
-    "    deoffs[i] = deoff.to(u.mas).value\n",
+    "    decoffs[i] = decoff.to(u.mas).value\n",
     "\n",
-    "print(raoffs, deoffs)"
+    "print(raoffs, decoffs)"
    ]
   },
   {
@@ -134,8 +134,8 @@
        "      <th>epoch</th>\n",
        "      <th>object</th>\n",
        "      <th>raoff</th>\n",
-       "      <th>deoff</th>\n",
-       "      <th>deoff_err</th>\n",
+       "      <th>decoff</th>\n",
+       "      <th>decoff_err</th>\n",
        "      <th>raoff_err</th>\n",
        "    </tr>\n",
        "  </thead>\n",
@@ -163,7 +163,7 @@
        "</div>"
       ],
       "text/plain": [
-       "        epoch  object        raoff        deoff  deoff_err  raoff_err\n",
+       "        epoch  object        raoff        decoff  decoff_err  raoff_err\n",
        "0  58894.1644       0   377.813056  1044.819572      123.4      123.4\n",
        "1  58934.8270       0  1425.176093   933.702905      123.4      123.4"
       ]
@@ -183,9 +183,9 @@
     "df_orbitize[\"object\"] = 0\n",
     "\n",
     "df_orbitize[\"raoff\"] = raoffs\n",
-    "df_orbitize[\"deoff\"] = deoffs\n",
+    "df_orbitize[\"decoff\"] = decoffs\n",
     "\n",
-    "df_orbitize[\"deoff_err\"] = 123.4  # error on the declination measurement, in mas\n",
+    "df_orbitize[\"decoff_err\"] = 123.4  # error on the declination measurement, in mas\n",
     "df_orbitize[\"raoff_err\"] = 123.4  # error on the RA measurement, in mas\n",
     "\n",
     "df_orbitize.to_csv(\"data_for_orbit_fit.csv\", index=False)\n",

{orbitize-3.1.0 → orbitize-3.2.2}/orbitize/__init__.py

@@ -1,6 +1,6 @@
 import os
 
-__version__ = "3.1.0"
+__version__ = "3.2.2"
 
 # set Python env variable to keep track of example data dir
 orbitize_dir = os.path.dirname(__file__)