opentrons 8.4.0a6__tar.gz → 8.8.0a8__tar.gz

opentrons-8.8.0a8/.flake8

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+[flake8]
+
+extend-exclude = venv .venv
+
+# max cyclomatic complexity
+max-complexity = 9
+
+extend-ignore =
+    # defer formatting concerns to black
+    # E203: space around `:` operator
+    # E501: maximum line length
+    E203,
+    E501,
+    # do not require type annotations for self nor cls
+    ANN101,
+    ANN102
+    # do not require docstring for __init__, put them on the class
+    D107,
+    # Don't forbid the function signature from being mentioned in the first line of the
+    # docstring. It tends to raise false positives when referring to other functions.
+    D402,
+
+# configure flake8-docstrings
+# https://pypi.org/project/flake8-docstrings/
+docstring-convention = google
+
+noqa-require-code = true
+
+# TODO(mc, 2020-11-06): this config ignores type annotation and doc
+# string lints in these modules; remove entries as they are fixed
+per-file-ignores =
+    setup.py:ANN,D
+    src/opentrons/__init__.py:ANN,D
+    src/opentrons/execute.py:ANN,D
+    src/opentrons/simulate.py:ANN,D
+    src/opentrons/types.py:ANN,D
+    src/opentrons/calibration_storage/*:ANN,D
+    src/opentrons/legacy_commands/*:D
+    src/opentrons/config/*:ANN,D
+    src/opentrons/drivers/*:ANN,D
+    src/opentrons/hardware_control/*:ANN,D
+    src/opentrons/protocol_api/*:ANN,D
+    src/opentrons/protocols/*:ANN,D
+    src/opentrons/resources/*:ANN,D
+    src/opentrons/system/*:ANN,D
+    src/opentrons/tools/*:ANN,D
+    src/opentrons/util/async_helpers.py:ANN,D
+    src/opentrons/util/logging_config.py:ANN,D
+    src/opentrons/util/linal.py:ANN,D
+    src/opentrons/util/entrypoint_util.py:ANN,D
+    src/opentrons/util/helpers.py:ANN,D
+    tests/opentrons/test_init.py:ANN,D
+    tests/opentrons/test_types.py:ANN,D
+    tests/opentrons/conftest.py:ANN,D
+    tests/opentrons/calibration_storage/*:ANN,D
+    tests/opentrons/legacy_commands/*:ANN,D
+    tests/opentrons/config/*:ANN,D
+    tests/opentrons/data/*:ANN,D
+    tests/opentrons/drivers/*:ANN,D
+    tests/opentrons/hardware_control/*:ANN,D
+    tests/opentrons/protocol_api_old/*:ANN,D
+    tests/opentrons/protocols/*:ANN,D
+    tests/opentrons/system/*:ANN,D
+    tests/opentrons/tools/*:ANN,D
+    tests/opentrons/util/test_async_helpers.py:ANN,D
+    tests/opentrons/util/test_linal.py:ANN,D
+    tests/opentrons/util/test_entrypoint_util.py:ANN,D

opentrons-8.8.0a8/.gitignore

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+*.py[cod]
+*.egg
+build
+htmlcov
+
+src/opentrons/_version.py
+tests/**/*.temp

opentrons-8.8.0a8/LICENSE

@@ -0,0 +1,202 @@
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opentrons-8.8.0a8/PKG-INFO

@@ -0,0 +1,37 @@
+Metadata-Version: 2.4
+Name: opentrons
+Version: 8.8.0a8
+Summary: The Opentrons API is a simple framework designed to make writing automated biology lab protocols easy.
+Project-URL: opentrons.com, https://www.opentrons.com
+Project-URL: Source Code On Github, https://github.com/Opentrons/opentrons/tree/edge/api
+Project-URL: Documentation, https://docs.opentrons.com
+Author-email: Opentrons <engineering@opentrons.com>
+License-Expression: Apache-2.0
+License-File: LICENSE
+Keywords: automation,lab,pcr,protocols,robots,synbio
+Classifier: Development Status :: 5 - Production/Stable
+Classifier: Environment :: Console
+Classifier: Intended Audience :: Science/Research
+Classifier: Operating System :: OS Independent
+Classifier: Programming Language :: Python
+Classifier: Programming Language :: Python :: 3
+Classifier: Programming Language :: Python :: 3.10
+Classifier: Topic :: Scientific/Engineering
+Requires-Python: >=3.10
+Requires-Dist: aionotify==0.3.1
+Requires-Dist: anyio<5.0.0,>=4.9.0
+Requires-Dist: click<9,>=8.0.0
+Requires-Dist: importlib-metadata>=1.0; python_version < '3.8'
+Requires-Dist: jsonschema<4.18.0,>=3.0.1
+Requires-Dist: numpy<2,>=1.20.0
+Requires-Dist: opentrons-shared-data==8.8.0a8
+Requires-Dist: packaging>=21.0
+Requires-Dist: pydantic-settings<3,>=2
+Requires-Dist: pydantic<3,>=2.0.0
+Requires-Dist: pyserial>=3.5
+Requires-Dist: pyusb==1.2.1
+Requires-Dist: typing-extensions<5,>=4.0.0
+Provides-Extra: flex-hardware
+Requires-Dist: opentrons-hardware[flex]==8.8.0a8; extra == 'flex-hardware'
+Provides-Extra: ot2-hardware
+Requires-Dist: opentrons-hardware==8.8.0a8; extra == 'ot2-hardware'

opentrons-8.8.0a8/Pipfile

@@ -0,0 +1,58 @@
+[[source]]
+url = "https://pypi.python.org/simple"
+verify_ssl = true
+name = "pypi"
+
+[packages]
+jsonschema = "==4.17.3"
+pydantic = "==2.11.7"
+pydantic-settings = "==2.4.0"
+anyio = "==4.9.0"
+opentrons-shared-data = { editable = true, path = "../shared-data" }
+opentrons = { editable = true, path = "." }
+opentrons-hardware = { editable = true, path = "./../hardware", extras=["FLEX"] }
+performance-metrics = {file = "../performance-metrics", editable = true}
+numpy = "==1.22.3"
+packaging = "==22.0"
+pyusb = "==1.2.1"
+# transitive dependency. 3.22 introduces a build plugin called coherent.licensed that
+# is not safe to have installed when another project is being built.
+zipp = "==3.21.0"
+
+[dev-packages]
+# atomicwrites and colorama are pytest dependencies on windows,
+# spec'd here to force lockfile inclusion
+# https://github.com/pypa/pipenv/issues/4408#issuecomment-668324177
+atomicwrites = { version = "==1.4.0", markers="sys_platform=='win32'" }
+colorama = { version = "==0.4.4", markers="sys_platform=='win32'" }
+coverage = "==7.4.1"
+mypy = "==1.11.0"
+numpydoc = "==0.9.1"
+pytest = "<9,>=8"
+pytest-asyncio = "<2,>=0.23.0"
+pytest-cov = "==4.1.0"
+pytest-xdist = "~=2.5.0"
+sphinx = "==5.0.1"
+twine = "==4.0.0"
+wheel = "==0.37.0"
+typeguard = "==4.1.5"
+sphinx-substitution-extensions = "==2020.9.30.0"
+sphinxext-opengraph = "==0.8.1"
+sphinx-tabs = ">=3.4.1,<4"
+mock = "==5.1.0"
+flake8 = "==7.0.0"
+flake8-annotations = "~=3.0.1"
+flake8-docstrings = "~=1.7.0"
+flake8-noqa = "~=1.4.0"
+decoy = "<3,>=2.2.0"
+black = "==22.3.0"
+types-mock = "~=5.1.0"
+types-setuptools = "==57.0.2"
+# specify typing-extensions explicitly to force lockfile inclusion on Python >= 3.8
+typing-extensions = ">=4.0.0,<5"
+pytest-profiling = "~=1.7.0"
+# TODO(mc, 2022-03-31): upgrade sphinx, remove this subdep pin
+jinja2 = ">=2.3,<3.1"
+hypothesis = "<7,>=6.96.1"
+build = "~=1.2.0"
+pytest-lazy-fixtures = "<2,>=1.1.4"