openflowsheet 0.1.1__tar.gz

openflowsheet-0.1.1/LICENSE

@@ -0,0 +1,202 @@
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openflowsheet-0.1.1/MANIFEST.in

@@ -0,0 +1,3 @@
+# T08.A43: the sdist carries the package, its runtime data, LICENSE, NOTICE and metadata only.
+# setuptools adds `tests/test*.py` to an sdist by default; the suite is not part of the release.
+prune tests

openflowsheet-0.1.1/NOTICE

@@ -0,0 +1,27 @@
+OpenFlowsheet — an agent-native open process simulator
+
+Copyright 2026 E.A.J.F. Peters
+
+Licensed under the Apache License, Version 2.0 (the "License"); you may not
+use this file except in compliance with the License. You may obtain a copy of
+the License at
+
+    http://www.apache.org/licenses/LICENSE-2.0
+
+Unless required by applicable law or agreed to in writing, software
+distributed under the License is distributed on an "AS IS" BASIS, WITHOUT
+WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the
+License for the specific language governing permissions and limitations under
+the License.
+
+The copyright line records the author's determination that this is scholarly
+output. Eindhoven University of Technology's guidance distinguishes teaching
+materials, whose copyright belongs to the university, from scholarly work such
+as dissertations, articles and monographs, whose copyright belongs to the
+creator; this software is of the second kind. Recorded here as the basis for
+the line, not as a legal opinion.
+
+This project distributes no third-party binaries. It depends on CasADi 3.8.0,
+fetched by the installer from PyPI; that wheel's `_casadi.so` closure is
+LGPL-3.0-or-later and its bytes are not redistributed here. See
+docs/adr/0006-distribution-data-rights.md.

openflowsheet-0.1.1/PKG-INFO

@@ -0,0 +1,101 @@
+Metadata-Version: 2.4
+Name: openflowsheet
+Version: 0.1.1
+Summary: OpenFlowsheet: an agent-native open process simulator
+Author-email: Frank Peters <e.a.j.f.peters@tue.nl>
+License-Expression: Apache-2.0
+Requires-Python: >=3.13
+Description-Content-Type: text/markdown
+License-File: LICENSE
+License-File: NOTICE
+Requires-Dist: numpy==2.2.4
+Requires-Dist: scipy==1.15.3
+Requires-Dist: pyyaml==6.0.2
+Requires-Dist: jsonschema==4.26.0
+Requires-Dist: casadi==3.8.0
+Provides-Extra: dev
+Requires-Dist: pytest==8.3.5; extra == "dev"
+Requires-Dist: mypy==1.15.0; extra == "dev"
+Requires-Dist: ruff==0.12.11; extra == "dev"
+Requires-Dist: types-PyYAML==6.0.12.20260906; extra == "dev"
+Requires-Dist: types-jsonschema==4.26.0.20260518; extra == "dev"
+Requires-Dist: mpmath==1.3.0; extra == "dev"
+Provides-Extra: server
+Requires-Dist: mcp==1.30.0; extra == "server"
+Requires-Dist: starlette==1.7.0; extra == "server"
+Requires-Dist: uvicorn==0.54.0; extra == "server"
+Dynamic: license-file
+
+# OpenFlowsheet
+
+An agent-native open process-engineering runtime, in which models, equations, numerical strategies,
+validity limits and evidence are explicit objects. Humans and coding agents work against the same
+scientific contracts. The project owns solver orchestration and process-specific numerical methods,
+and reuses established differentiation, linear-algebra and optimization infrastructure.
+
+## Status
+
+**Pre-release. Phase 0 is complete; no capability is released, and nothing here is validated against
+experiment or an independent process simulator.**
+
+| | |
+| --- | --- |
+| Complete | P00 repository and gate, P01 state semantics and the SYN-001 oracle, P02 matched backend spikes, P03 backend and distribution verdicts |
+| In progress | K01 — the production `CompiledProblem` compiler on the selected backend |
+| Established | Numerical verification against independent references: the P01 oracle agrees with 20-digit reference values to 7.1e-15 worst relative deviation, and P02's two backend routes agree with each other and with that reference inside every registered tolerance |
+| **Not** established | Empirical validation against experiment or another simulator; optimality evidence; human numerical or process-modeling review — `review.numerical` and `review.process_model` are `pending` in every evidence manifest and no agent may set them |
+
+What the project has and has not shown is recorded per package in `evidence/<ID>/<commit>/manifest.json`,
+and the current position is `docs/progress.md`.
+
+## Authorities
+
+Read these before changing anything they cover.
+
+| Document | Role |
+| --- | --- |
+| `docs/blueprint-v3.1.md` | Architectural authority. Its SHA-256 is recorded in the implementation plan's header and checked by the test suite |
+| `docs/implementation-plan.md` | Execution authority: work packages, order, acceptance evidence, gates |
+| `docs/adr/` | Normative decisions. ADR 0001 state/units/zero-flow, 0003 backend, 0006 distribution, 0008 transient-extension readiness |
+| `docs/decision-register.md` | What was chosen, what was rejected, and why — the index that makes the ADRs findable by the question they answer |
+| `CLAUDE.md` | Working rules for the two coding agents that share this repository |
+
+## Development
+
+Requires Python 3.13.
+
+```bash
+make venv                                  # create .venv and install with dev extras
+make check                                 # ruff, ruff format, mypy --strict, pytest
+make lock                                  # regenerate requirements.lock from the environment
+```
+
+`make check` is the gate. It must be green before any merge, and a failed gate stays failed — it is
+never relaxed, narrowed or worked around to let a change through.
+
+## Third-party notices
+
+This software uses **CasADi 3.8.0**, which is licensed under the **GNU Lesser General Public License,
+version 3 or later (LGPL-3.0-or-later)**. CasADi is a separate work, obtained by the installer from
+PyPI as a pinned dependency; this project distributes none of its bytes. It is used through its
+Python API only — the interpreter loads the library at run time, nothing is compiled against its
+headers or linked against it at build time, and a user may substitute their own build of CasADi
+3.8.0 by replacing the installed package.
+
+The full licence text ships inside the CasADi distribution at `casadi/LICENSE/LICENSE.txt` in the
+installed package, together with notices for its bundled components at `casadi/include/licenses/`.
+
+An exact inventory of what that distribution contains — every binary with its SHA-256, the bundled
+plugin inventory including the bytes that cannot run, and the notices — is
+**`docs/p03-binary-audit.md`**, with the machine-readable record in `spikes/p03/results/`. The terms
+on which this project may and may not redistribute any of it are **`docs/adr/0006-distribution-data-rights.md`**.
+Changing the CasADi pin re-runs that audit before the change merges.
+
+Further attributions are in `NOTICE`.
+
+## Licence
+
+The core licence is **Apache-2.0**, declared in `pyproject.toml` and stated in `LICENSE` and
+`NOTICE`. The maintainer confirmed the project's rights to distribute its contributions under it on
+2026-09-23 (`120acb4`). Why Apache-2.0 rather than MIT is recorded in `docs/decision-register.md`
+R-005.

openflowsheet-0.1.1/README.md

@@ -0,0 +1,73 @@
+# OpenFlowsheet
+
+An agent-native open process-engineering runtime, in which models, equations, numerical strategies,
+validity limits and evidence are explicit objects. Humans and coding agents work against the same
+scientific contracts. The project owns solver orchestration and process-specific numerical methods,
+and reuses established differentiation, linear-algebra and optimization infrastructure.
+
+## Status
+
+**Pre-release. Phase 0 is complete; no capability is released, and nothing here is validated against
+experiment or an independent process simulator.**
+
+| | |
+| --- | --- |
+| Complete | P00 repository and gate, P01 state semantics and the SYN-001 oracle, P02 matched backend spikes, P03 backend and distribution verdicts |
+| In progress | K01 — the production `CompiledProblem` compiler on the selected backend |
+| Established | Numerical verification against independent references: the P01 oracle agrees with 20-digit reference values to 7.1e-15 worst relative deviation, and P02's two backend routes agree with each other and with that reference inside every registered tolerance |
+| **Not** established | Empirical validation against experiment or another simulator; optimality evidence; human numerical or process-modeling review — `review.numerical` and `review.process_model` are `pending` in every evidence manifest and no agent may set them |
+
+What the project has and has not shown is recorded per package in `evidence/<ID>/<commit>/manifest.json`,
+and the current position is `docs/progress.md`.
+
+## Authorities
+
+Read these before changing anything they cover.
+
+| Document | Role |
+| --- | --- |
+| `docs/blueprint-v3.1.md` | Architectural authority. Its SHA-256 is recorded in the implementation plan's header and checked by the test suite |
+| `docs/implementation-plan.md` | Execution authority: work packages, order, acceptance evidence, gates |
+| `docs/adr/` | Normative decisions. ADR 0001 state/units/zero-flow, 0003 backend, 0006 distribution, 0008 transient-extension readiness |
+| `docs/decision-register.md` | What was chosen, what was rejected, and why — the index that makes the ADRs findable by the question they answer |
+| `CLAUDE.md` | Working rules for the two coding agents that share this repository |
+
+## Development
+
+Requires Python 3.13.
+
+```bash
+make venv                                  # create .venv and install with dev extras
+make check                                 # ruff, ruff format, mypy --strict, pytest
+make lock                                  # regenerate requirements.lock from the environment
+```
+
+`make check` is the gate. It must be green before any merge, and a failed gate stays failed — it is
+never relaxed, narrowed or worked around to let a change through.
+
+## Third-party notices
+
+This software uses **CasADi 3.8.0**, which is licensed under the **GNU Lesser General Public License,
+version 3 or later (LGPL-3.0-or-later)**. CasADi is a separate work, obtained by the installer from
+PyPI as a pinned dependency; this project distributes none of its bytes. It is used through its
+Python API only — the interpreter loads the library at run time, nothing is compiled against its
+headers or linked against it at build time, and a user may substitute their own build of CasADi
+3.8.0 by replacing the installed package.
+
+The full licence text ships inside the CasADi distribution at `casadi/LICENSE/LICENSE.txt` in the
+installed package, together with notices for its bundled components at `casadi/include/licenses/`.
+
+An exact inventory of what that distribution contains — every binary with its SHA-256, the bundled
+plugin inventory including the bytes that cannot run, and the notices — is
+**`docs/p03-binary-audit.md`**, with the machine-readable record in `spikes/p03/results/`. The terms
+on which this project may and may not redistribute any of it are **`docs/adr/0006-distribution-data-rights.md`**.
+Changing the CasADi pin re-runs that audit before the change merges.
+
+Further attributions are in `NOTICE`.
+
+## Licence
+
+The core licence is **Apache-2.0**, declared in `pyproject.toml` and stated in `LICENSE` and
+`NOTICE`. The maintainer confirmed the project's rights to distribute its contributions under it on
+2026-09-23 (`120acb4`). Why Apache-2.0 rather than MIT is recorded in `docs/decision-register.md`
+R-005.

openflowsheet-0.1.1/pyproject.toml

@@ -0,0 +1,109 @@
+[project.scripts]
+# Blueprint D15: local Python and CLI share one contract, and neither needs a network round
+# trip. The console script is a thin wrapper over `openflowsheet.application.cli`.
+openflowsheet = "openflowsheet.application.cli:main"
+
+[build-system]
+requires = ["setuptools>=78.1.1"]
+build-backend = "setuptools.build_meta"
+
+[project]
+name = "openflowsheet"
+version = "0.1.1"
+description = "OpenFlowsheet: an agent-native open process simulator"
+requires-python = ">=3.13"
+readme = "README.md"
+license = "Apache-2.0"
+authors = [{ name = "Frank Peters", email = "e.a.j.f.peters@tue.nl" }]
+dependencies = [
+    "numpy==2.2.4",
+    "scipy==1.15.3",
+    "pyyaml==6.0.2",
+    "jsonschema==4.26.0",
+    # The compiled backend selected by ADR 0003 on the P02/P03 evidence. Pinned exactly, because
+    # the [A10] audit in docs/p03-binary-audit.md is of these bytes and no others: changing this
+    # pin re-runs scripts/p03_binary_inventory.py before it merges (ADR 0006 D5.4). CasADi is
+    # LGPL-3.0-or-later and is used through its Python API only; see the third-party notice in
+    # README.md (ADR 0006 D5.1).
+    "casadi==3.8.0",
+]
+
+[project.optional-dependencies]
+dev = [
+    "pytest==8.3.5",
+    "mypy==1.15.0",
+    "ruff==0.12.11",
+    "types-PyYAML==6.0.12.20260906",
+    "types-jsonschema==4.26.0.20260518",
+    "mpmath==1.3.0",  # derivation scripts under docs/derivations/scripts (P01 reference values)
+]
+# T07 §11.1: the HTTP and MCP bindings' libraries, optional so that the default install is
+# unchanged. `mcp` is the latest 1.x that speaks protocol 2025-06-18 (`structuredContent`,
+# `outputSchema`); starlette and uvicorn are the versions `mcp` resolves to, pinned exactly. The
+# closure's transitive pins are in requirements.lock, and its licences are inventoried by
+# scripts/t07_licence_inventory.py (gate G19).
+server = [
+    "mcp==1.30.0",
+    "starlette==1.7.0",
+    "uvicorn==0.54.0",
+]
+
+[tool.setuptools]
+package-dir = { "" = "src" }
+
+[tool.setuptools.packages.find]
+where = ["src"]
+
+[tool.setuptools.package-data]
+# T08 W4.2: the runtime data the installed package reads (`openflowsheet.resources`). `_data/`
+# holds symbolic links to the single repository copies, so the wheel carries their bytes and the
+# checkout reads the originals; T08.A43's build check compares the two file by file.
+openflowsheet = [
+    "py.typed",
+    "_data/schemas/*.schema.json",
+    "_data/benchmarks/k04/reference_values.yaml",
+    "_data/benchmarks/syn001/reference_values.yaml",
+    "_data/benchmarks/t08/numerical_policy_v2.yaml",
+]
+# The MCP tool descriptions and their review record are served text (T07 W6c, gate G15).
+"openflowsheet.application.bindings" = ["descriptions/*.md", "descriptions/REVIEW.json"]
+
+[tool.ruff]
+line-length = 100
+target-version = "py313"
+
+[tool.ruff.lint]
+select = ["E", "F", "I", "B", "UP", "N"]
+
+[tool.ruff.lint.per-file-ignores]
+# The SYN-001 oracle and its tests use the physical symbols of the derivation (T, P, K, V, L,
+# F, Q_*, H_*) as identifiers. Those names are fixed by docs/derivations/SYN-001-oracle-spec.md
+# §1, frozen per docs/interfaces-frozen.md, so pep8-naming's lowercase rules for arguments
+# (N803), local variables (N806) and dataclass fields such as `sum_zK` (N815) are switched off
+# for these three files only. No other check is relaxed anywhere.
+"benchmarks/syn001/oracle.py" = ["N803", "N806", "N815"]
+"tests/test_syn001_oracle.py" = ["N803", "N806"]
+"tests/test_syn001_reference_values.py" = ["N803", "N806"]
+
+[tool.mypy]
+python_version = "3.13"
+# `benchmarks` is type-checked as strictly as `src`: the SYN-001 oracle is an acceptance
+# reference for K02-K04 and must not drift (P01).
+files = ["src", "benchmarks"]
+# Shadows the malformed stub CasADi 3.8.0 ships; see stubs/casadi/__init__.pyi for why.
+mypy_path = ["stubs"]
+strict = true
+warn_unreachable = true
+
+# SciPy ships no py.typed marker and no stub package is pinned, so its imports are untyped.
+# This narrows *only* the missing-stub error for scipy; every other strict check still applies to
+# the code that uses it, and no repository module is exempted.
+[[tool.mypy.overrides]]
+module = ["scipy.*"]
+ignore_missing_imports = true
+
+[tool.pytest.ini_options]
+testpaths = ["tests"]
+# The repository root on sys.path so `benchmarks.syn001.oracle` imports without installing it;
+# the oracle is deliberately not part of the `openflowsheet` distribution.
+pythonpath = ["."]

openflowsheet-0.1.1/setup.cfg

@@ -0,0 +1,4 @@
+[egg_info]
+tag_build = 
+tag_date = 0
+

openflowsheet-0.1.1/src/openflowsheet/__init__.py

@@ -0,0 +1,16 @@
+"""Agent-native open process simulator, provisional import name ``openflowsheet``.
+
+This distribution is the single installable package described in blueprint v3.1 §15: one
+modular monorepo with logical layers rather than microservices. The subpackages ``ir``,
+``units``, ``models``, ``thermo``, ``compile``, ``graph``, ``numerics``, ``orchestrator``,
+and ``application`` correspond to the architectural boundaries of blueprint §3, and each one
+states its own responsibility and the work package that will introduce its behavior. Later
+layers (``studies``, ``adapters``, clients, and the web workbench) are deliberately absent
+until their packages start, per implementation plan §2.
+
+No functionality yet; introduced by package P00 (repository bootstrap only).
+"""
+
+__version__ = "0.1.1"
+
+__all__ = ["__version__"]