opencloning 0.2.7.2__tar.gz → 0.2.7.3__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (45) hide show
  1. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/PKG-INFO +1 -1
  2. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/pyproject.toml +1 -1
  3. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/ncbi_requests.py +4 -2
  4. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/LICENSE +0 -0
  5. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/README.md +0 -0
  6. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/__init__.py +0 -0
  7. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/api_config_utils.py +0 -0
  8. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/app_settings.py +0 -0
  9. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/assembly2.py +0 -0
  10. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/EBIC/__init__.py +0 -0
  11. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/EBIC/barcode.gb +0 -0
  12. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/EBIC/common_plasmid.gb +0 -0
  13. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/EBIC/example.py +0 -0
  14. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/EBIC/primer_design_settings.py +0 -0
  15. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/__init__.py +0 -0
  16. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/index.html +0 -0
  17. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/pombe/__init__.py +0 -0
  18. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/pombe/index.html +0 -0
  19. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/pombe/pombe_all.sh +0 -0
  20. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/pombe/pombe_clone.py +0 -0
  21. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/pombe/pombe_gather.py +0 -0
  22. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/pombe/pombe_get_primers.py +0 -0
  23. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/pombe/pombe_summary.py +0 -0
  24. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/ziqiang_et_al2024/__init__.py +0 -0
  25. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/ziqiang_et_al2024/index.html +0 -0
  26. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/batch_cloning/ziqiang_et_al2024/ziqiang_et_al2024.json +0 -0
  27. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/dna_functions.py +0 -0
  28. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/dna_utils.py +0 -0
  29. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/ebic/__init__.py +0 -0
  30. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/ebic/primer_design.py +0 -0
  31. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/ebic/primer_design_settings.py +0 -0
  32. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/endpoints/annotation.py +0 -0
  33. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/endpoints/assembly.py +0 -0
  34. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/endpoints/external_import.py +0 -0
  35. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/endpoints/no_assembly.py +0 -0
  36. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/endpoints/no_input.py +0 -0
  37. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/endpoints/other.py +0 -0
  38. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/endpoints/primer_design.py +0 -0
  39. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/gateway.py +0 -0
  40. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/get_router.py +0 -0
  41. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/main.py +0 -0
  42. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/primer_design.py +0 -0
  43. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/pydantic_models.py +0 -0
  44. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/request_examples.py +0 -0
  45. {opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/utils.py +0 -0
{opencloning-0.2.7.2 → opencloning-0.2.7.3}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.3
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  Name: opencloning
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- Version: 0.2.7.2
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+ Version: 0.2.7.3
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  Summary: Backend of OpenCloning, a web application to generate molecular cloning strategies in json format, and share them with others.
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  License: MIT
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  Author: Manuel Lera-Ramirez
{opencloning-0.2.7.2 → opencloning-0.2.7.3}/pyproject.toml RENAMED
@@ -3,7 +3,7 @@ authors = ["Manuel Lera-Ramirez <manulera14@gmail.com>"]
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  description = "Backend of OpenCloning, a web application to generate molecular cloning strategies in json format, and share them with others."
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  license = "MIT"
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  name = "opencloning"
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- version = "v0.2.7.2"
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+ version = "v0.2.7.3"
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  package-mode = true
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  readme = "README.md"
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  repository = "https://github.com/manulera/OpenCloning_backend"
{opencloning-0.2.7.2 → opencloning-0.2.7.3}/src/opencloning/ncbi_requests.py RENAMED
@@ -32,9 +32,11 @@ async def get_sequence_accessions_from_assembly_accession(assembly_accession: st
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  resp = await async_get(url, headers=headers)
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  data = resp.json()
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  if 'reports' in data:
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- return [report['refseq_accession'] for report in data['reports']] + [
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- report['genbank_accession'] for report in data['reports']
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+ refseq_accessions = [report['refseq_accession'] for report in data['reports'] if 'refseq_accession' in report]
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+ genbank_accessions = [
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+ report['genbank_accession'] for report in data['reports'] if 'genbank_accession' in report
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  ]
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+ return refseq_accessions + genbank_accessions
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  elif 'total_count' in data:
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  raise HTTPException(400, f'No sequence accessions linked, see {url}')
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  else:
{opencloning-0.2.7.2 → opencloning-0.2.7.3}/LICENSE RENAMED
File without changes
{opencloning-0.2.7.2 → opencloning-0.2.7.3}/README.md RENAMED
File without changes