nyc-mesh 0.1.0__tar.gz

nyc_mesh-0.1.0/.git_archival.txt

@@ -0,0 +1,3 @@
+node: $Format:%H$
+node-date: $Format:%cI$
+describe-name: $Format:%(describe:tags=true,match=*[0-9]*)$

nyc_mesh-0.1.0/.gitattributes

@@ -0,0 +1 @@
+.git_archival.txt  export-subst

nyc_mesh-0.1.0/.github/CONTRIBUTING.md

@@ -0,0 +1,68 @@
+See the [Scientific Python Developer Guide][spc-dev-intro] for broader
+background on Python package maintenance.
+
+[spc-dev-intro]: https://learn.scientific-python.org/development/
+
+# Quick development
+
+The fastest way to start with development is to use the repo Makefile:
+
+```bash
+make install-dev
+make test
+make lint
+make docs-build
+make ci
+```
+
+`nox` is still available for repository hygiene hooks and focused sessions, but
+`make` is the primary local interface so it matches CI.
+
+# Setting up a development environment manually
+
+You can set up a development environment by running:
+
+```bash
+uv sync
+```
+
+# Pre-commit
+
+Install `pre-commit` to run the same hygiene checks used in CI:
+
+```bash
+uv tool install pre-commit # or brew install pre-commit on macOS
+pre-commit install
+```
+
+You can also run `pre-commit run --all-files`.
+
+# Testing
+
+Use pytest to run the unit checks:
+
+```bash
+make test
+```
+
+# Coverage
+
+Use pytest-cov to generate coverage reports:
+
+```bash
+uv run pytest --cov=nyc_mesh
+```
+
+# Building docs
+
+You can build and serve the docs using:
+
+```bash
+make docs
+```
+
+You can build the docs only with:
+
+```bash
+make docs-build
+```

nyc_mesh-0.1.0/.github/dependabot.yml

@@ -0,0 +1,11 @@
+version: 2
+updates:
+  # Maintain dependencies for GitHub Actions
+  - package-ecosystem: "github-actions"
+    directory: "/"
+    schedule:
+      interval: "weekly"
+    groups:
+      actions:
+        patterns:
+          - "*"

nyc_mesh-0.1.0/.github/release.yml

@@ -0,0 +1,5 @@
+changelog:
+  exclude:
+    authors:
+      - dependabot[bot]
+      - pre-commit-ci[bot]

nyc_mesh-0.1.0/.github/workflows/cd.yml

@@ -0,0 +1,101 @@
+name: CD
+
+on:
+  workflow_dispatch:
+    inputs:
+      publish:
+        description: Publish built distributions to the configured package index
+        required: true
+        type: boolean
+        default: false
+      repository:
+        description: Target package index for manual publishes
+        required: true
+        type: choice
+        default: testpypi
+        options:
+          - testpypi
+          - pypi
+  release:
+    types:
+      - published
+
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
+
+permissions:
+  contents: read
+
+jobs:
+  dist:
+    name: Distribution build
+    runs-on: ubuntu-latest
+
+    steps:
+      - uses: actions/checkout@v6
+        with:
+          fetch-depth: 0
+
+      - uses: actions/setup-python@v6
+        with:
+          python-version: "3.12"
+
+      - uses: astral-sh/setup-uv@cec208311dfd045dd5311c1add060b2062131d57 # v8.0.0
+        with:
+          enable-cache: true
+
+      - name: Build distributions and validate long description
+        run: make ci-build
+
+      - name: Smoke-test installed wheel
+        run: make smoke-dist
+
+      - uses: actions/upload-artifact@v6
+        with:
+          name: Packages
+          path: dist/*
+
+  publish:
+    needs: [dist]
+    name: Publish to PyPI
+    environment:
+      name: pypi
+    permissions:
+      id-token: write
+      attestations: write
+      contents: read
+    runs-on: ubuntu-latest
+    if: >-
+      vars.PYPI_PUBLISH_ENABLED == 'true' && (
+        (github.event_name == 'release' && github.event.action == 'published')
+      ||
+        (github.event_name == 'workflow_dispatch' && inputs.publish == true &&
+        startsWith(github.ref, 'refs/tags/'))
+      )
+
+    steps:
+      - uses: actions/download-artifact@v8
+        with:
+          name: Packages
+          path: dist
+
+      - name: Generate artifact attestation for public releases
+        if: github.event.repository.private == false
+        uses: actions/attest-build-provenance@v4
+        with:
+          subject-path: "dist/*"
+
+      - name: Publish package distributions to TestPyPI
+        if:
+          github.event_name == 'workflow_dispatch' && inputs.repository ==
+          'testpypi'
+        uses: pypa/gh-action-pypi-publish@release/v1
+        with:
+          repository-url: https://test.pypi.org/legacy/
+
+      - name: Publish package distributions to PyPI
+        if:
+          github.event_name == 'release' || (github.event_name ==
+          'workflow_dispatch' && inputs.repository == 'pypi')
+        uses: pypa/gh-action-pypi-publish@release/v1

nyc_mesh-0.1.0/.github/workflows/ci.yml

@@ -0,0 +1,161 @@
+name: CI
+
+on:
+  workflow_dispatch:
+  pull_request:
+  push:
+    branches:
+      - main
+
+concurrency:
+  group: ${{ github.workflow }}-${{ github.ref }}
+  cancel-in-progress: true
+
+permissions:
+  contents: read
+
+jobs:
+  lint:
+    name: Lint and types
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v6
+        with:
+          fetch-depth: 0
+
+      - uses: actions/setup-python@v6
+        with:
+          python-version: "3.12"
+
+      - uses: astral-sh/setup-uv@cec208311dfd045dd5311c1add060b2062131d57 # v8.0.0
+        with:
+          enable-cache: true
+
+      - name: Install lint dependencies
+        run: uv sync --frozen --group docs --all-extras
+
+      - name: Run Ruff
+        run: uv run --frozen ruff check --output-format=github .
+
+      - name: Check Ruff formatting
+        run: uv run --frozen ruff format --check .
+
+      - name: Run mypy
+        run: uv run --frozen mypy
+
+      - name: Run pylint
+        run: uv run --frozen pylint nyc_mesh --output-format=github
+
+      - name: Run public API audit
+        run: uv run --frozen python scripts/audit_public_api.py
+
+      - name: Run repository hygiene hooks
+        run: >-
+          uvx nox -s lint -- blacken-docs check-added-large-files
+          check-case-conflict check-merge-conflict check-symlinks check-yaml
+          debug-statements end-of-file-fixer mixed-line-ending name-tests-test
+          requirements-txt-fixer trailing-whitespace rst-backticks
+          rst-directive-colons rst-inline-touching-normal prettier codespell
+          shellcheck disallow-caps validate-pyproject check-dependabot
+          check-github-workflows check-readthedocs
+
+  build:
+    name: Build distribution
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v6
+        with:
+          fetch-depth: 0
+
+      - uses: actions/setup-python@v6
+        with:
+          python-version: "3.12"
+
+      - uses: astral-sh/setup-uv@cec208311dfd045dd5311c1add060b2062131d57 # v8.0.0
+        with:
+          enable-cache: true
+
+      - name: Build distributions and validate long description
+        run: make ci-build
+
+      - name: Smoke-test installed wheel
+        run: make smoke-dist
+
+  docs:
+    name: Build docs
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v6
+        with:
+          fetch-depth: 0
+
+      - uses: actions/setup-python@v6
+        with:
+          python-version: "3.12"
+
+      - uses: astral-sh/setup-uv@cec208311dfd045dd5311c1add060b2062131d57 # v8.0.0
+        with:
+          enable-cache: true
+
+      - name: Install docs dependencies
+        run: uv sync --frozen --group docs
+
+      - name: Build docs with strict checks
+        run: uv run --frozen mkdocs build --strict
+
+  tests:
+    name: Test full install (Python ${{ matrix.python-version }})
+    runs-on: ubuntu-latest
+    permissions:
+      contents: read
+      checks: write
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ["3.11", "3.12", "3.13"]
+
+    steps:
+      - uses: actions/checkout@v6
+        with:
+          fetch-depth: 0
+
+      - uses: actions/setup-python@v6
+        with:
+          python-version: ${{ matrix.python-version }}
+
+      - uses: astral-sh/setup-uv@cec208311dfd045dd5311c1add060b2062131d57 # v8.0.0
+        with:
+          enable-cache: true
+
+      - name: Install full test environment
+        run: uv sync --frozen --all-extras
+
+      - name: Run full test suite
+        run: >-
+          uv run --frozen pytest -ra --cov --cov-report=xml --cov-report=term
+          --junitxml="junit/${{ matrix.python-version }}.xml" --durations=20
+
+      - name: Publish test results
+        if: always()
+        uses: EnricoMi/publish-unit-test-result-action@v2
+        with:
+          check_name: Test Results (Python ${{ matrix.python-version }})
+          comment_mode: off
+          files: junit/${{ matrix.python-version }}.xml
+
+      - name: Upload coverage report
+        if: matrix.python-version == '3.11'
+        uses: codecov/codecov-action@v6
+        with:
+          token: ${{ secrets.CODECOV_TOKEN }}
+
+  pass:
+    if: always()
+    needs: [lint, build, docs, tests]
+    runs-on: ubuntu-slim
+    timeout-minutes: 2
+    steps:
+      - name: Decide whether the needed jobs succeeded or failed
+        uses: re-actors/alls-green@release/v1
+        with:
+          jobs: ${{ toJSON(needs) }}

nyc_mesh-0.1.0/.gitignore

@@ -0,0 +1,186 @@
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+cover/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# UV
+#   Similar to Pipfile.lock, it is generally recommended to include uv.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#uv.lock
+
+# poetry
+#   Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#   https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
+#poetry.lock
+
+# pdm
+#   Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
+#pdm.lock
+#   pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
+#   in version control.
+#   https://pdm.fming.dev/latest/usage/project/#working-with-version-control
+.pdm.toml
+.pdm-python
+.pdm-build/
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+
+# Cython debug symbols
+cython_debug/
+
+# PyCharm
+#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+#.idea/
+
+# setuptools_scm
+src/*/_version.py
+
+
+# Caches
+.*_cache/
+
+# OS specific stuff
+.DS_Store
+.DS_Store?
+._*
+.Spotlight-V100
+.Trashes
+ehthumbs.db
+Thumbs.db
+
+# Common editor files
+*~
+*.swp

nyc_mesh-0.1.0/.pre-commit-config.yaml

@@ -0,0 +1,96 @@
+ci:
+  autoupdate_commit_msg: "chore(deps): update pre-commit hooks"
+  autofix_commit_msg: "style: pre-commit fixes"
+  autoupdate_schedule: "monthly"
+
+exclude: ^.cruft.json|.copier-answers.yml$
+
+repos:
+  - repo: https://github.com/adamchainz/blacken-docs
+    rev: "1.20.0"
+    hooks:
+      - id: blacken-docs
+        additional_dependencies: [black==26.*]
+
+  - repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: "v6.0.0"
+    hooks:
+      - id: check-added-large-files
+      - id: check-case-conflict
+      - id: check-merge-conflict
+      - id: check-symlinks
+      - id: check-yaml
+      - id: debug-statements
+      - id: end-of-file-fixer
+      - id: mixed-line-ending
+      - id: name-tests-test
+        args: ["--pytest-test-first"]
+      - id: requirements-txt-fixer
+      - id: trailing-whitespace
+
+  - repo: https://github.com/pre-commit/pygrep-hooks
+    rev: "v1.10.0"
+    hooks:
+      - id: rst-backticks
+      - id: rst-directive-colons
+      - id: rst-inline-touching-normal
+
+  - repo: https://github.com/rbubley/mirrors-prettier
+    rev: "v3.8.1"
+    hooks:
+      - id: prettier
+        types_or: [yaml, markdown, html, css, scss, javascript, json]
+        args: [--prose-wrap=always]
+
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    rev: "v0.15.7"
+    hooks:
+      - id: ruff-check
+        args: ["--fix"]
+      - id: ruff-format
+
+  - repo: https://github.com/pre-commit/mirrors-mypy
+    rev: "v1.19.1"
+    hooks:
+      - id: mypy
+        files: src|tests|noxfile.py
+        args: []
+        additional_dependencies:
+          - pyproj
+          - lxml-stubs
+          - nox
+          - pytest
+
+  - repo: https://github.com/codespell-project/codespell
+    rev: "v2.4.2"
+    hooks:
+      - id: codespell
+        args: ["-L", "astroid,explination"]
+        additional_dependencies:
+          - tomli; python_version<'3.11'
+
+  - repo: https://github.com/shellcheck-py/shellcheck-py
+    rev: "v0.11.0.1"
+    hooks:
+      - id: shellcheck
+
+  - repo: local
+    hooks:
+      - id: disallow-caps
+        name: Disallow improper capitalization
+        language: pygrep
+        entry: PyBind|Numpy|Cmake|CCache|Github|PyTest
+        exclude: .pre-commit-config.yaml
+
+  - repo: https://github.com/abravalheri/validate-pyproject
+    rev: "v0.25"
+    hooks:
+      - id: validate-pyproject
+        additional_dependencies: ["validate-pyproject-schema-store[all]"]
+
+  - repo: https://github.com/python-jsonschema/check-jsonschema
+    rev: "0.37.0"
+    hooks:
+      - id: check-dependabot
+      - id: check-github-workflows
+      - id: check-readthedocs

nyc_mesh-0.1.0/.readthedocs.yaml

@@ -0,0 +1,15 @@
+# Read the Docs configuration file
+# See https://docs.readthedocs.io/en/stable/config-file/v2.html for details
+
+version: 2
+
+build:
+  os: ubuntu-24.04
+  tools:
+    python: "3.13"
+  commands:
+    - asdf plugin add uv
+    - asdf install uv latest
+    - asdf global uv latest
+    - uv sync --group docs
+    - uv run mkdocs build --site-dir $READTHEDOCS_OUTPUT/html