PyPI - numba-mpi - Versions diffs - 1.1.6__tar.gz → 1.1.8__tar.gz - Mend

numba-mpi 1.1.6tar.gz → 1.1.8tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (67) hide show

{numba_mpi-1.1.6 → numba_mpi-1.1.8}/.github/workflows/tests+pypi.yml RENAMED Viewed

@@ -25,7 +25,7 @@ jobs:
     - uses: mpi4py/setup-mpi@v1
     - run: |
         pip install pylint
-        pip install -e .[tests,CI_version_pins]
+        pip install --only-binary=:all: -e .[tests,CI_version_pins]
     - run: |
         pylint --ignored-modules=mpi4py --disable=fixme,duplicate-code $(git ls-files '*.py' | grep -v -e ^tests/paper_listings)
@@ -59,7 +59,7 @@ jobs:
       - name: Build
         run: |
           pip install pdoc
-          pip install -e .[CI_version_pins]
+          pip install --only-binary=:all: -e .[CI_version_pins]
           PDOC_ALLOW_EXEC=1 python -We -m pdoc -o html numba_mpi
       - name: Deploy
         if: github.ref == 'refs/heads/main'
@@ -85,28 +85,33 @@ jobs:
         mpi-np: [2, 3]
         platform:
           - ubuntu-latest
+          - ubuntu-24.04-arm
           - windows-latest
-          - macos-13          # arch: Intel
+          - macos-15-intel    # arch: Intel
           - macos-15          # arch: arm64
-        python-version: ["3.10", "3.11", "3.12", "3.13"]
+        python-version: ["3.10", "3.11", "3.12", "3.13", "3.14"]
         mpi: [ 'mpich', 'openmpi', 'msmpi', 'intelmpi']
         exclude:
-        - platform: macos-13
+        - platform: macos-15-intel
           mpi: msmpi
-        - platform: macos-13
+        - platform: macos-15-intel
           mpi: intelmpi
-        - platform: macos-13   # TODO: # 163
-          mpi: openmpi
         - platform: macos-15
           mpi: msmpi
         - platform: macos-15
           mpi: intelmpi
+        - platform: macos-15-intel   # TODO: # 163
+          mpi: openmpi
         - platform: macos-15   # TODO: # 163
           mpi: openmpi
+        - python-version: "3.14"
+          platform: macos-15-intel
         - platform: ubuntu-latest
           mpi: msmpi
-        - platform: ubuntu-latest # TODO: #162
-          mpi: mpich
+        - platform: ubuntu-24.04-arm
+          mpi: msmpi
+        - platform: ubuntu-24.04-arm
+          mpi: intelmpi
         - platform: windows-latest
           mpi: mpich
         - platform: windows-latest
@@ -123,14 +128,15 @@ jobs:
       - uses: mpi4py/setup-mpi@v1
         with:
           mpi: ${{ matrix.mpi }}
-      - if: ${{ matrix.platform == 'macos-15' }}
-        run: echo DYLD_FALLBACK_LIBRARY_PATH="/opt/homebrew/lib:/usr/lib:$DYLD_FALLBACK_LIBRARY_PATH" >> $GITHUB_ENV
+      - if: startsWith(matrix.platform, 'macos-')
+        run: echo DYLD_FALLBACK_LIBRARY_PATH="/opt/homebrew/lib:/usr/local/lib:/usr/lib:$DYLD_FALLBACK_LIBRARY_PATH" >> $GITHUB_ENV
       - if: matrix.mpi == 'intelmpi'
         run: |
           # checking if multiple MPI libs are OK
           sudo apt-get install mpi-default-bin
           mpiexec python -c "import os; assert 'I_MPI_ROOT' in os.environ"
-      - run: pip install -e .[tests,CI_version_pins]
+      - run: |
+          pip install --only-binary=:all: -e .[tests,CI_version_pins]
       - run: python -We -c "import mpi4py"
       - run: python -We -c "import numba_mpi"
       - run: mpiexec -n ${{ matrix.mpi-np }} pytest --durations=10 -p no:unraisableexception -We
@@ -158,7 +164,7 @@ jobs:
       - run: twine check --strict dist/*
       - run: |
-          pip install --find-links file:./dist numba-mpi
+          pip install --only-binary=:all: --find-links file:./dist numba-mpi
           cd /tmp  # make sure local files are not picked up
           python -We -c "import numba_mpi"

numba_mpi-1.1.8/.github/workflows/urlcheck.yml ADDED Viewed

@@ -0,0 +1,24 @@
+name: urlcheck
+on:
+  push:
+    branches: [ main ]
+  pull_request:
+    branches: [ main ]
+  schedule:
+    - cron: '0 13 * * 4'
+jobs:
+  url-check:
+    runs-on: ubuntu-24.04
+    steps:
+      - uses: actions/checkout@v4.1.6
+      - uses: urlstechie/urlchecker-action@master
+        with:
+          file_types: .md,.py,.json,.yaml,.yml,.toml,.txt,.cff
+          print_all: false
+          verbose: true
+          timeout: 7
+          retry_count: 3
+          exclude_files: .github/workflows/urlcheck.yml
+          exclude_urls: https://www.gnu.org/licenses/gpl-3.0.html

{numba_mpi-1.1.6/numba_mpi.egg-info → numba_mpi-1.1.8}/PKG-INFO RENAMED Viewed

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: numba-mpi
-Version: 1.1.6
+Version: 1.1.8
 Summary: Numba @jittable MPI wrappers tested on Linux, macOS and Windows
 Author-email: "https://github.com/numba-mpi/numba-mpi/graphs/contributors" <sylwester.arabas@agh.edu.pl>
 License-Expression: GPL-3.0-only
@@ -27,7 +27,7 @@ Provides-Extra: tests
 Requires-Dist: pytest; extra == "tests"
 Requires-Dist: py-pde; extra == "tests"
 Provides-Extra: ci-version-pins
-Requires-Dist: pytest<8.0.0; extra == "ci-version-pins"
+Requires-Dist: pytest==9.0.1; extra == "ci-version-pins"
 Dynamic: license-file
 # <img src="https://raw.githubusercontent.com/numba-mpi/numba-mpi/main/.github/numba_mpi_logo.png" width=128 height=142 alt="numba-mpi logo"> numba-mpi
@@ -37,7 +37,7 @@ Dynamic: license-file
 [![Linux OK](https://img.shields.io/static/v1?label=Linux&logo=Linux&color=yellow&message=%E2%9C%93)](https://en.wikipedia.org/wiki/Linux)
 [![macOS OK](https://img.shields.io/static/v1?label=macOS&logo=Apple&color=silver&message=%E2%9C%93)](https://en.wikipedia.org/wiki/macOS)
 [![Windows OK](https://img.shields.io/static/v1?label=Windows&logo=Windows&color=white&message=%E2%9C%93)](https://en.wikipedia.org/wiki/Windows)
-[![Github Actions Status](https://github.com/numba-mpi/numba-mpi/workflows/tests+pypi/badge.svg?branch=main)](https://github.com/numba-mpi/numba-mpi/actions/workflows/tests+pypi.yml)
+[![Github Actions Status](https://github.com/numba-mpi/numba-mpi/actions/workflows/tests+pypi.yml/badge.svg?branch=main)](https://github.com/numba-mpi/numba-mpi/actions/workflows/tests+pypi.yml)
 [![Maintenance](https://img.shields.io/badge/Maintained%3F-yes-green.svg)](https://GitHub.com/numba-mpi/numba-mpi/graphs/commit-activity)
 [![License: GPL v3](https://img.shields.io/badge/License-GPL%20v3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0.html)
 [![PyPI version](https://badge.fury.io/py/numba-mpi.svg)](https://pypi.org/project/numba-mpi)
@@ -62,9 +62,10 @@ Packages can be obtained from
 numba-mpi is a pure-Python package.
 The codebase includes a test suite used through the GitHub Actions workflows ([thanks to mpi4py's setup-mpi](https://github.com/mpi4py/setup-mpi)!)
-for automated testing on: Linux ([MPICH](https://www.mpich.org/), [OpenMPI](https://www.open-mpi.org/doc/)
+for automated testing on: Intel Linux ([MPICH](https://www.mpich.org/), [OpenMPI](https://www.open-mpi.org/doc/)
 & [Intel MPI](https://www.intel.com/content/www/us/en/developer/tools/oneapi/mpi-library.html)),
-macOS ([MPICH](https://www.mpich.org/) & [OpenMPI](https://www.open-mpi.org/doc/)) and
+ARM Linux ([MPICH](https://www.mpich.org/) & [OpenMPI](https://www.open-mpi.org/doc/)),
+Intel and ARM macOS ([MPICH](https://www.mpich.org/)) and
 Windows ([MS MPI](https://docs.microsoft.com/en-us/message-passing-interface/microsoft-mpi)). Note, that some of those
 combinations may not be fully supported yet - see [Known Issues](#known-issues) for more information.
@@ -172,8 +173,6 @@ if numba_mpi.rank() == 0:
 **NOTE**: Issues listed below only relate to combinations of platforms and MPI distributions that we target to support, but due to various reason are currently not working and are temporarily excluded from automated testing:
-- tests on Ubuntu 2024.4 that use MPICH are not run due to failures caused by newer version of MPICH (`4.2.0`); note, that previous tests ran
-using version `4.0.2` of MPICH (that is installed by default on Ubuntu 2022.4 using `apt`) were passing (see [related issue](https://github.com/numba-mpi/numba-mpi/issues/162) - TODO #162),
 - tests on MacOS (both Intel- and ARM-based) that use OpenMPI are currently not run due to failures being under investigation (see [related issue](https://github.com/numba-mpi/numba-mpi/issues/163)  - TODO #163).
 ### MPI resources on the web:
@@ -191,7 +190,7 @@ using version `4.0.2` of MPICH (that is installed by default on Ubuntu 2022.4 us
     - Python/JAX: https://mpi4jax.readthedocs.io
     - Julia: https://juliaparallel.org/MPI.jl
     - Rust: https://docs.rs/mpi
-    - C++: https://boost.org/doc/html/mpi.html
+    - C++: https://www.boost.org/doc/libs/latest/doc/html/mpi.html
     - R: https://cran.r-project.org/web/packages/Rmpi
 ### Acknowledgements:

{numba_mpi-1.1.6 → numba_mpi-1.1.8}/README.md RENAMED Viewed

@@ -5,7 +5,7 @@
 [![Linux OK](https://img.shields.io/static/v1?label=Linux&logo=Linux&color=yellow&message=%E2%9C%93)](https://en.wikipedia.org/wiki/Linux)
 [![macOS OK](https://img.shields.io/static/v1?label=macOS&logo=Apple&color=silver&message=%E2%9C%93)](https://en.wikipedia.org/wiki/macOS)
 [![Windows OK](https://img.shields.io/static/v1?label=Windows&logo=Windows&color=white&message=%E2%9C%93)](https://en.wikipedia.org/wiki/Windows)
-[![Github Actions Status](https://github.com/numba-mpi/numba-mpi/workflows/tests+pypi/badge.svg?branch=main)](https://github.com/numba-mpi/numba-mpi/actions/workflows/tests+pypi.yml)
+[![Github Actions Status](https://github.com/numba-mpi/numba-mpi/actions/workflows/tests+pypi.yml/badge.svg?branch=main)](https://github.com/numba-mpi/numba-mpi/actions/workflows/tests+pypi.yml)
 [![Maintenance](https://img.shields.io/badge/Maintained%3F-yes-green.svg)](https://GitHub.com/numba-mpi/numba-mpi/graphs/commit-activity)
 [![License: GPL v3](https://img.shields.io/badge/License-GPL%20v3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0.html)
 [![PyPI version](https://badge.fury.io/py/numba-mpi.svg)](https://pypi.org/project/numba-mpi)
@@ -30,9 +30,10 @@ Packages can be obtained from
 numba-mpi is a pure-Python package.
 The codebase includes a test suite used through the GitHub Actions workflows ([thanks to mpi4py's setup-mpi](https://github.com/mpi4py/setup-mpi)!)
-for automated testing on: Linux ([MPICH](https://www.mpich.org/), [OpenMPI](https://www.open-mpi.org/doc/)
+for automated testing on: Intel Linux ([MPICH](https://www.mpich.org/), [OpenMPI](https://www.open-mpi.org/doc/)
 & [Intel MPI](https://www.intel.com/content/www/us/en/developer/tools/oneapi/mpi-library.html)),
-macOS ([MPICH](https://www.mpich.org/) & [OpenMPI](https://www.open-mpi.org/doc/)) and
+ARM Linux ([MPICH](https://www.mpich.org/) & [OpenMPI](https://www.open-mpi.org/doc/)),
+Intel and ARM macOS ([MPICH](https://www.mpich.org/)) and
 Windows ([MS MPI](https://docs.microsoft.com/en-us/message-passing-interface/microsoft-mpi)). Note, that some of those
 combinations may not be fully supported yet - see [Known Issues](#known-issues) for more information.
@@ -140,8 +141,6 @@ if numba_mpi.rank() == 0:
 **NOTE**: Issues listed below only relate to combinations of platforms and MPI distributions that we target to support, but due to various reason are currently not working and are temporarily excluded from automated testing:
-- tests on Ubuntu 2024.4 that use MPICH are not run due to failures caused by newer version of MPICH (`4.2.0`); note, that previous tests ran
-using version `4.0.2` of MPICH (that is installed by default on Ubuntu 2022.4 using `apt`) were passing (see [related issue](https://github.com/numba-mpi/numba-mpi/issues/162) - TODO #162),
 - tests on MacOS (both Intel- and ARM-based) that use OpenMPI are currently not run due to failures being under investigation (see [related issue](https://github.com/numba-mpi/numba-mpi/issues/163)  - TODO #163).
 ### MPI resources on the web:
@@ -159,7 +158,7 @@ using version `4.0.2` of MPICH (that is installed by default on Ubuntu 2022.4 us
     - Python/JAX: https://mpi4jax.readthedocs.io
     - Julia: https://juliaparallel.org/MPI.jl
     - Rust: https://docs.rs/mpi
-    - C++: https://boost.org/doc/html/mpi.html
+    - C++: https://www.boost.org/doc/libs/latest/doc/html/mpi.html
     - R: https://cran.r-project.org/web/packages/Rmpi
 ### Acknowledgements:

{numba_mpi-1.1.6 → numba_mpi-1.1.8}/numba_mpi/api/irecv.py RENAMED Viewed

@@ -1,6 +1,7 @@
 # pylint: disable=duplicate-code
 """MPI_Irecv() implementation"""
 import ctypes
 import numba

{numba_mpi-1.1.6 → numba_mpi-1.1.8}/numba_mpi/api/isend.py RENAMED Viewed

@@ -1,6 +1,7 @@
 # pylint: disable=duplicate-code
 """MPI_Isend() implementation"""
 import ctypes
 import numba

{numba_mpi-1.1.6 → numba_mpi-1.1.8}/numba_mpi/common.py RENAMED Viewed

@@ -76,7 +76,8 @@ if LIB is None:
     if sys.platform == "darwin":
         raise RuntimeError(
             """MPI library not found, if MPI was installed with Homebrew, export the following:
-            DYLD_FALLBACK_LIBRARY_PATH="/opt/homebrew/lib:/usr/lib:$DYLD_FALLBACK_LIBRARY_PATH
+            ARM: DYLD_FALLBACK_LIBRARY_PATH="/opt/homebrew/lib:/usr/lib:$DYLD_FALLBACK_LIBRARY_PATH
+            Intel: DYLD_FALLBACK_LIBRARY_PATH="/usr/local/lib:/usr/lib:$DYLD_FALLBACK_LIBRARY_PATH
             """
         )
     raise RuntimeError("no MPI library found")

{numba_mpi-1.1.6 → numba_mpi-1.1.8/numba_mpi.egg-info}/PKG-INFO RENAMED Viewed

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: numba-mpi
-Version: 1.1.6
+Version: 1.1.8
 Summary: Numba @jittable MPI wrappers tested on Linux, macOS and Windows
 Author-email: "https://github.com/numba-mpi/numba-mpi/graphs/contributors" <sylwester.arabas@agh.edu.pl>
 License-Expression: GPL-3.0-only
@@ -27,7 +27,7 @@ Provides-Extra: tests
 Requires-Dist: pytest; extra == "tests"
 Requires-Dist: py-pde; extra == "tests"
 Provides-Extra: ci-version-pins
-Requires-Dist: pytest<8.0.0; extra == "ci-version-pins"
+Requires-Dist: pytest==9.0.1; extra == "ci-version-pins"
 Dynamic: license-file
 # <img src="https://raw.githubusercontent.com/numba-mpi/numba-mpi/main/.github/numba_mpi_logo.png" width=128 height=142 alt="numba-mpi logo"> numba-mpi
@@ -37,7 +37,7 @@ Dynamic: license-file
 [![Linux OK](https://img.shields.io/static/v1?label=Linux&logo=Linux&color=yellow&message=%E2%9C%93)](https://en.wikipedia.org/wiki/Linux)
 [![macOS OK](https://img.shields.io/static/v1?label=macOS&logo=Apple&color=silver&message=%E2%9C%93)](https://en.wikipedia.org/wiki/macOS)
 [![Windows OK](https://img.shields.io/static/v1?label=Windows&logo=Windows&color=white&message=%E2%9C%93)](https://en.wikipedia.org/wiki/Windows)
-[![Github Actions Status](https://github.com/numba-mpi/numba-mpi/workflows/tests+pypi/badge.svg?branch=main)](https://github.com/numba-mpi/numba-mpi/actions/workflows/tests+pypi.yml)
+[![Github Actions Status](https://github.com/numba-mpi/numba-mpi/actions/workflows/tests+pypi.yml/badge.svg?branch=main)](https://github.com/numba-mpi/numba-mpi/actions/workflows/tests+pypi.yml)
 [![Maintenance](https://img.shields.io/badge/Maintained%3F-yes-green.svg)](https://GitHub.com/numba-mpi/numba-mpi/graphs/commit-activity)
 [![License: GPL v3](https://img.shields.io/badge/License-GPL%20v3-blue.svg)](https://www.gnu.org/licenses/gpl-3.0.html)
 [![PyPI version](https://badge.fury.io/py/numba-mpi.svg)](https://pypi.org/project/numba-mpi)
@@ -62,9 +62,10 @@ Packages can be obtained from
 numba-mpi is a pure-Python package.
 The codebase includes a test suite used through the GitHub Actions workflows ([thanks to mpi4py's setup-mpi](https://github.com/mpi4py/setup-mpi)!)
-for automated testing on: Linux ([MPICH](https://www.mpich.org/), [OpenMPI](https://www.open-mpi.org/doc/)
+for automated testing on: Intel Linux ([MPICH](https://www.mpich.org/), [OpenMPI](https://www.open-mpi.org/doc/)
 & [Intel MPI](https://www.intel.com/content/www/us/en/developer/tools/oneapi/mpi-library.html)),
-macOS ([MPICH](https://www.mpich.org/) & [OpenMPI](https://www.open-mpi.org/doc/)) and
+ARM Linux ([MPICH](https://www.mpich.org/) & [OpenMPI](https://www.open-mpi.org/doc/)),
+Intel and ARM macOS ([MPICH](https://www.mpich.org/)) and
 Windows ([MS MPI](https://docs.microsoft.com/en-us/message-passing-interface/microsoft-mpi)). Note, that some of those
 combinations may not be fully supported yet - see [Known Issues](#known-issues) for more information.
@@ -172,8 +173,6 @@ if numba_mpi.rank() == 0:
 **NOTE**: Issues listed below only relate to combinations of platforms and MPI distributions that we target to support, but due to various reason are currently not working and are temporarily excluded from automated testing:
-- tests on Ubuntu 2024.4 that use MPICH are not run due to failures caused by newer version of MPICH (`4.2.0`); note, that previous tests ran
-using version `4.0.2` of MPICH (that is installed by default on Ubuntu 2022.4 using `apt`) were passing (see [related issue](https://github.com/numba-mpi/numba-mpi/issues/162) - TODO #162),
 - tests on MacOS (both Intel- and ARM-based) that use OpenMPI are currently not run due to failures being under investigation (see [related issue](https://github.com/numba-mpi/numba-mpi/issues/163)  - TODO #163).
 ### MPI resources on the web:
@@ -191,7 +190,7 @@ using version `4.0.2` of MPICH (that is installed by default on Ubuntu 2022.4 us
     - Python/JAX: https://mpi4jax.readthedocs.io
     - Julia: https://juliaparallel.org/MPI.jl
     - Rust: https://docs.rs/mpi
-    - C++: https://boost.org/doc/html/mpi.html
+    - C++: https://www.boost.org/doc/libs/latest/doc/html/mpi.html
     - R: https://cran.r-project.org/web/packages/Rmpi
 ### Acknowledgements:

{numba_mpi-1.1.6 → numba_mpi-1.1.8}/numba_mpi.egg-info/SOURCES.txt RENAMED Viewed

@@ -11,6 +11,7 @@ pyproject.toml
 .github/workflows/readme_snippets.yml
 .github/workflows/stale.yml
 .github/workflows/tests+pypi.yml
+.github/workflows/urlcheck.yml
 .vscode/settings.json
 numba_mpi/__init__.py
 numba_mpi/common.py

{numba_mpi-1.1.6 → numba_mpi-1.1.8}/numba_mpi.egg-info/requires.txt RENAMED Viewed

@@ -4,7 +4,7 @@ mpi4py
 psutil
 [CI_version_pins]
-pytest<8.0.0
+pytest==9.0.1
 [tests]
 pytest

{numba_mpi-1.1.6 → numba_mpi-1.1.8}/pyproject.toml RENAMED Viewed

@@ -33,13 +33,16 @@ authors = [
     {name = "https://github.com/numba-mpi/numba-mpi/graphs/contributors", email = "sylwester.arabas@agh.edu.pl"}
 ]
 dynamic = ["version"]
-dependencies = ["numba", "numpy", "mpi4py", "psutil"]
+dependencies = [
+    "numba",
+    "numpy",
+    "mpi4py",
+    "psutil"
+]
 [project.optional-dependencies]
-"tests" = ["pytest", "py-pde"]
-"CI_version_pins" = [
-    "pytest<8.0.0", # TODO #122
-]
+tests = ["pytest", "py-pde"]
+CI_version_pins = ["pytest==9.0.1"]
 [project.urls]
 Tracker = "https://github.com/numba-mpi/numba-mpi/issues"