np-workflows 1.6.90__tar.gz → 1.6.92__tar.gz

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Files changed (53) hide show
  1. {np_workflows-1.6.90 → np_workflows-1.6.92}/PKG-INFO +2 -7
  2. {np_workflows-1.6.90 → np_workflows-1.6.92}/pyproject.toml +4 -29
  3. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/shared/base_experiments.py +0 -1
  4. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows.egg-info/PKG-INFO +2 -7
  5. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows.egg-info/requires.txt +1 -6
  6. {np_workflows-1.6.90 → np_workflows-1.6.92}/README.md +0 -0
  7. {np_workflows-1.6.90 → np_workflows-1.6.92}/setup.cfg +0 -0
  8. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/__init__.py +0 -0
  9. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/__init__.py +0 -0
  10. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/dynamic_routing/__init__.py +0 -0
  11. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/dynamic_routing/main.py +0 -0
  12. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/dynamic_routing/widgets.py +0 -0
  13. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_P3/P3_workflow_widget.py +0 -0
  14. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_P3/__init__.py +0 -0
  15. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_P3/main_P3_pilot.py +0 -0
  16. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_barcode/__init__.py +0 -0
  17. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_barcode/barcode_workflow_widget.py +0 -0
  18. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_barcode/camstim_scripts/barcode_mapping_script.py +0 -0
  19. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_barcode/camstim_scripts/barcode_opto_script.py +0 -0
  20. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_barcode/main_barcode_pilot.py +0 -0
  21. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_loop/__init__.py +0 -0
  22. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_loop/camstim_scripts/barcode_mapping_script.py +0 -0
  23. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_loop/camstim_scripts/barcode_opto_script.py +0 -0
  24. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_loop/loop_workflow_widget.py +0 -0
  25. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_loop/main_loop_pilot.py +0 -0
  26. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_psycode/__init__.py +0 -0
  27. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_psycode/main_psycode_pilot.py +0 -0
  28. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_psycode/psycode_workflow_widget.py +0 -0
  29. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_v2/__init__.py +0 -0
  30. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_v2/main_v2_pilot.py +0 -0
  31. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_v2/v2_workflow_widget.py +0 -0
  32. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_vippo/__init__.py +0 -0
  33. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_vippo/main_vippo_pilot.py +0 -0
  34. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/openscope_vippo/vippo_workflow_widget.py +0 -0
  35. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/task_trained_network/__init__.py +0 -0
  36. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/task_trained_network/camstim_scripts/make_tt_stims.py +0 -0
  37. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/task_trained_network/camstim_scripts/oct22_tt_stim_script.py +0 -0
  38. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/task_trained_network/camstim_scripts/ttn_main_script.py +0 -0
  39. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/task_trained_network/camstim_scripts/ttn_mapping_script.py +0 -0
  40. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/task_trained_network/camstim_scripts/ttn_opto_script.py +0 -0
  41. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/task_trained_network/main_ttn_pilot.py +0 -0
  42. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/task_trained_network/ttn_session_widget.py +0 -0
  43. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/task_trained_network/ttn_stim_config.py +0 -0
  44. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/templeton/__init__.py +0 -0
  45. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/templeton/main.py +0 -0
  46. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/experiments/templeton/widgets.py +0 -0
  47. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/shared/__init__.py +0 -0
  48. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/shared/npxc.py +0 -0
  49. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows/shared/widgets.py +0 -0
  50. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows.egg-info/SOURCES.txt +0 -0
  51. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows.egg-info/dependency_links.txt +0 -0
  52. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows.egg-info/entry_points.txt +0 -0
  53. {np_workflows-1.6.90 → np_workflows-1.6.92}/src/np_workflows.egg-info/top_level.txt +0 -0
@@ -1,6 +1,6 @@
1
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  Metadata-Version: 2.4
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  Name: np-workflows
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- Version: 1.6.90
3
+ Version: 1.6.92
4
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  Summary: Ecephys and behavior workflows for the Mindscope Neuropixels team.
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  Author-email: Ben Hardcastle <ben.hardcastle@alleninstitute.org>
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  License: MIT
@@ -13,22 +13,17 @@ Classifier: Operating System :: Microsoft :: Windows
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  Classifier: Operating System :: POSIX :: Linux
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  Requires-Python: ==3.11.*
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  Description-Content-Type: text/markdown
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+ Requires-Dist: ipykernel
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  Requires-Dist: np-services>=0.1.69
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  Requires-Dist: np-session>=0.6.48
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  Requires-Dist: np-config>=0.4.33
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  Requires-Dist: ipywidgets>=7
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  Requires-Dist: pydantic>=2
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- Requires-Dist: jupyterlab>=3.6
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- Requires-Dist: ipylab>=0.6.0
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  Requires-Dist: np-tools>=0.1.24
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  Requires-Dist: np-jobs>=0.0.3
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  Requires-Dist: universal-pathlib>=0.1.0
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  Requires-Dist: s3fs>=2023.6.0
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  Requires-Dist: npc-shields>=0.1.10
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- Requires-Dist: npc-sessions>=0.0.225
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- Requires-Dist: np-codeocean[dynamic-routing-metadata]>=0.2.1
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- Requires-Dist: panel>=1.4.5
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- Requires-Dist: aind-session>=0.1.20
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  Requires-Dist: jupyter-bokeh>=4.0.5
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34
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  # np_workflows
@@ -1,6 +1,6 @@
1
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  [project]
2
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  name = "np-workflows"
3
- version = "1.6.90"
3
+ version = "1.6.92"
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  description = "Ecephys and behavior workflows for the Mindscope Neuropixels team."
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  authors = [
6
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  { name = "Ben Hardcastle", email = "ben.hardcastle@alleninstitute.org" },
@@ -8,22 +8,17 @@ authors = [
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  readme = "README.md"
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  requires-python = "==3.11.*"
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  dependencies = [
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+ "ipykernel",
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  "np-services>=0.1.69",
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  "np-session>=0.6.48",
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  "np-config>=0.4.33",
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  "ipywidgets>=7",
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  "pydantic>=2",
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- "jupyterlab >= 3.6",
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- "ipylab >= 0.6.0",
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  "np-tools>=0.1.24",
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  "np-jobs>=0.0.3",
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  "universal-pathlib>=0.1.0",
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  "s3fs>=2023.6.0",
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  "npc-shields>=0.1.10",
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- "npc-sessions>=0.0.225",
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- "np-codeocean[dynamic-routing-metadata]>=0.2.1",
25
- "panel>=1.4.5",
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- "aind-session>=0.1.20",
27
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  "jupyter-bokeh>=4.0.5",
28
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  ]
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  classifiers = [
@@ -52,7 +47,7 @@ task = "poethepoet:main"
52
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  [dependency-groups]
53
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  task_runner = ["poethepoet>=0.33.1"]
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  linting = ["black>=25.1.0", "isort>=6.0.1", "ruff>=0.11.2"]
55
- testing = ["pytest>=7.4.0", "mypy>=1.4.1", "pytest-cov>=4.1.0"]
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+ testing = ["mypy>=1.4.1"]
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  bump = [
57
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  "bump-my-version>=1.1.1",
58
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  "git-changelog>=2.5.3",
@@ -85,8 +80,7 @@ post_commit_hooks = [
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86
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  [tool.poe.tasks]
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  mypy = "mypy src --install-types --non-interactive"
88
- pytest = "pytest --cov-report term-missing:skip-covered --cov-report=html"
89
- test = ["pytest"]
83
+ test = ["mypy"]
90
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  ruff = "ruff check src --fix-only"
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  black = "black src"
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  format = ["ruff", "black"]
@@ -157,25 +151,6 @@ exclude_also = [
157
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  "@typing.runtime_checkable",
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  ]
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160
- [tool.pytest.ini_options]
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- addopts = [
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- "--import-mode=importlib",
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- # "--doctest-modules",
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- "--ignore-glob=*scripts*,*examples*,*docs*",
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- "--cov",
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- "--cov-report=html",
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- "--cov-config=pyproject.toml",
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- "--doctest-glob=*README.md",
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- "-x",
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- # "-n=auto", for use with pytest-xdist
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- ]
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- doctest_optionflags = [
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- "NORMALIZE_WHITESPACE",
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- "IGNORE_EXCEPTION_DETAIL",
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- "ELLIPSIS",
176
- ]
177
- testpaths = ["src", "tests"]
178
-
179
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  [tool.mypy]
180
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  check_untyped_defs = false
181
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  disallow_untyped_defs = false
@@ -13,7 +13,6 @@ from typing import Any, ClassVar, Literal, Optional, Protocol, Type
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14
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  import fabric
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  import invoke
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- import ipylab
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  import np_config
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  import np_logging
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  import np_services
@@ -1,6 +1,6 @@
1
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  Metadata-Version: 2.4
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  Name: np-workflows
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- Version: 1.6.90
3
+ Version: 1.6.92
4
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  Summary: Ecephys and behavior workflows for the Mindscope Neuropixels team.
5
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  Author-email: Ben Hardcastle <ben.hardcastle@alleninstitute.org>
6
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  License: MIT
@@ -13,22 +13,17 @@ Classifier: Operating System :: Microsoft :: Windows
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  Classifier: Operating System :: POSIX :: Linux
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  Requires-Python: ==3.11.*
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  Description-Content-Type: text/markdown
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+ Requires-Dist: ipykernel
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  Requires-Dist: np-services>=0.1.69
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  Requires-Dist: np-session>=0.6.48
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  Requires-Dist: np-config>=0.4.33
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  Requires-Dist: ipywidgets>=7
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  Requires-Dist: pydantic>=2
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- Requires-Dist: jupyterlab>=3.6
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- Requires-Dist: ipylab>=0.6.0
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  Requires-Dist: np-tools>=0.1.24
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  Requires-Dist: np-jobs>=0.0.3
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  Requires-Dist: universal-pathlib>=0.1.0
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  Requires-Dist: s3fs>=2023.6.0
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  Requires-Dist: npc-shields>=0.1.10
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- Requires-Dist: npc-sessions>=0.0.225
29
- Requires-Dist: np-codeocean[dynamic-routing-metadata]>=0.2.1
30
- Requires-Dist: panel>=1.4.5
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- Requires-Dist: aind-session>=0.1.20
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  Requires-Dist: jupyter-bokeh>=4.0.5
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  # np_workflows
@@ -1,17 +1,12 @@
1
+ ipykernel
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  np-services>=0.1.69
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  np-session>=0.6.48
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  np-config>=0.4.33
4
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  ipywidgets>=7
5
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  pydantic>=2
6
- jupyterlab>=3.6
7
- ipylab>=0.6.0
8
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  np-tools>=0.1.24
9
8
  np-jobs>=0.0.3
10
9
  universal-pathlib>=0.1.0
11
10
  s3fs>=2023.6.0
12
11
  npc-shields>=0.1.10
13
- npc-sessions>=0.0.225
14
- np-codeocean[dynamic-routing-metadata]>=0.2.1
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- panel>=1.4.5
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- aind-session>=0.1.20
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  jupyter-bokeh>=4.0.5
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