np-workflows 1.6.86__tar.gz → 1.6.87__tar.gz

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Files changed (71) hide show
  1. {np_workflows-1.6.86 → np_workflows-1.6.87}/PKG-INFO +1 -1
  2. {np_workflows-1.6.86 → np_workflows-1.6.87}/pyproject.toml +1 -1
  3. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/shared/base_experiments.py +8 -2
  4. {np_workflows-1.6.86 → np_workflows-1.6.87}/README.md +0 -0
  5. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/__init__.py +0 -0
  6. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/assets/images/logo_np_hab.png +0 -0
  7. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/assets/images/logo_np_vis.png +0 -0
  8. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/__init__.py +0 -0
  9. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/dynamic_routing/__init__.py +0 -0
  10. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/dynamic_routing/main.py +0 -0
  11. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/dynamic_routing/widgets.py +0 -0
  12. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_barcode/__init__.py +0 -0
  13. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_barcode/barcode_workflow_widget.py +0 -0
  14. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_barcode/camstim_scripts/barcode_mapping_script.py +0 -0
  15. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_barcode/camstim_scripts/barcode_opto_script.py +0 -0
  16. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_barcode/main_barcode_pilot.py +0 -0
  17. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_loop/__init__.py +0 -0
  18. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_loop/camstim_scripts/barcode_mapping_script.py +0 -0
  19. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_loop/camstim_scripts/barcode_opto_script.py +0 -0
  20. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_loop/loop_workflow_widget.py +0 -0
  21. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_loop/main_loop_pilot.py +0 -0
  22. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_psycode/__init__.py +0 -0
  23. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_psycode/main_psycode_pilot.py +0 -0
  24. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_psycode/psycode_workflow_widget.py +0 -0
  25. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_vippo/__init__.py +0 -0
  26. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_vippo/main_vippo_pilot.py +0 -0
  27. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/openscope_vippo/vippo_workflow_widget.py +0 -0
  28. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/__init__.py +0 -0
  29. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/make_tt_stims.py +0 -0
  30. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/oct22_tt_stim_script.py +0 -0
  31. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_00.stim +0 -0
  32. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_01.stim +0 -0
  33. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_02.stim +0 -0
  34. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_03.stim +0 -0
  35. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_04.stim +0 -0
  36. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_05.stim +0 -0
  37. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_06.stim +0 -0
  38. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_07.stim +0 -0
  39. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_08.stim +0 -0
  40. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_09.stim +0 -0
  41. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_10.stim +0 -0
  42. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_11.stim +0 -0
  43. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_12.stim +0 -0
  44. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_13.stim +0 -0
  45. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_14.stim +0 -0
  46. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_15.stim +0 -0
  47. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_16.stim +0 -0
  48. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_17.stim +0 -0
  49. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/densely_annotated_18.stim +0 -0
  50. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/flash_250ms.stim +0 -0
  51. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/gabor_20_deg_250ms.stim +0 -0
  52. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/old_stim.stim +0 -0
  53. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/shuffle_reversed.stim +0 -0
  54. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/shuffle_reversed_1st.stim +0 -0
  55. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/stims/shuffle_reversed_2nd.stim +0 -0
  56. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/ttn_main_script.py +0 -0
  57. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/ttn_mapping_script.py +0 -0
  58. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/camstim_scripts/ttn_opto_script.py +0 -0
  59. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/main_ttn_pilot.py +0 -0
  60. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/ttn_session_widget.py +0 -0
  61. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/task_trained_network/ttn_stim_config.py +0 -0
  62. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/templeton/__init__.py +0 -0
  63. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/templeton/main.py +0 -0
  64. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/experiments/templeton/widgets.py +0 -0
  65. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/shared/__init__.py +0 -0
  66. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/shared/camstim_scripts/flash_250ms.stim +0 -0
  67. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/shared/camstim_scripts/gabor_20_deg_250ms.stim +0 -0
  68. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/shared/npxc.py +0 -0
  69. {np_workflows-1.6.86 → np_workflows-1.6.87}/src/np_workflows/shared/widgets.py +0 -0
  70. {np_workflows-1.6.86 → np_workflows-1.6.87}/tests/model_sandbox.py +0 -0
  71. {np_workflows-1.6.86 → np_workflows-1.6.87}/tests/widget_sandbox.ipynb +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.1
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  Name: np-workflows
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- Version: 1.6.86
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+ Version: 1.6.87
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  Summary: Ecephys and behavior workflows for the Mindscope Neuropixels team.
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  Author-Email: Ben Hardcastle <ben.hardcastle@alleninstitute.org>
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  License: MIT
@@ -1,6 +1,6 @@
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  [project]
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  name = "np-workflows"
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- version = "1.6.86"
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+ version = "1.6.87"
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  description = "Ecephys and behavior workflows for the Mindscope Neuropixels team."
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  authors = [
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  { name = "Ben Hardcastle", email = "ben.hardcastle@alleninstitute.org" },
@@ -8,7 +8,7 @@ import pathlib
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  import re
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  import shutil
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  import time
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- from typing import Any, ClassVar, Iterable, Literal, Optional, Protocol, Sequence, Type
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+ from typing import Any, ClassVar, Iterable, Literal, Mapping, Optional, Protocol, Sequence, Type
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  import fabric
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  import invoke
@@ -712,7 +712,13 @@ class DynamicRoutingExperiment(WithSession):
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  else:
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  np_services.ScriptCamstim.script = self.camstim_script.as_posix()
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- np_services.ScriptCamstim.params = params
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+ if (script_override_params := getattr(self, 'script_override_params', None)) is not None:
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+ if not isinstance(script_override_params, Mapping):
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+ raise TypeError(f"script_override_params must be a dict/Mapping, got {type(script_override_params)}")
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+ else:
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+ script_override_params = {}
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+
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+ np_services.ScriptCamstim.params = params | script_override_params
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  self.update_state()
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  self.log(f"{stim} started")
File without changes