nmdc-runtime 2.0.0__tar.gz → 2.0.1__tar.gz

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  1. {nmdc_runtime-2.0.0/nmdc_runtime.egg-info → nmdc_runtime-2.0.1}/PKG-INFO +1 -1
  2. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1/nmdc_runtime.egg-info}/PKG-INFO +1 -1
  3. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/requirements/main.in +1 -1
  4. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/requirements/main.txt +1 -1
  5. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.dockerignore +0 -0
  6. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.env.example +0 -0
  7. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.env.test +0 -0
  8. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.github/ISSUE_TEMPLATE/bug_report.md +0 -0
  9. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.github/ISSUE_TEMPLATE/feature_request.md +0 -0
  10. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.github/pull_request_template.md +0 -0
  11. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.github/workflows/build-and-release-to-spin.yml +0 -0
  12. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.github/workflows/lint.yml +0 -0
  13. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.github/workflows/mkdocs.yml +0 -0
  14. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.github/workflows/python-app.yml +0 -0
  15. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.github/workflows/release-to-pypi.yml +0 -0
  16. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.gitignore +0 -0
  17. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.gitpod.Dockerfile +0 -0
  18. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.gitpod.yml +0 -0
  19. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.nvmrc +0 -0
  20. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/LICENSE +0 -0
  21. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/Makefile +0 -0
  22. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/README.md +0 -0
  23. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/RELEASES.md +0 -0
  24. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/components/nmdc_runtime/workflow/__init__.py +0 -0
  25. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/components/nmdc_runtime/workflow/spec.py +0 -0
  26. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/components/nmdc_runtime/workflow_execution_activity/__init__.py +0 -0
  27. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/components/nmdc_runtime/workflow_execution_activity/core.py +0 -0
  28. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/components/nmdc_runtime/workflow_execution_activity/spec.py +0 -0
  29. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/components/nmdc_runtime/workflow_execution_activity/store.py +0 -0
  30. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_discovery/.env.example +0 -0
  31. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_discovery/GOLDs5levelEcosystemClassificationPaths.xlsx +0 -0
  32. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_discovery/biosamples.json +0 -0
  33. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_discovery/console_queries.dev +0 -0
  34. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_discovery/docker-compose.yml +0 -0
  35. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_discovery/envo.owl +0 -0
  36. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_discovery/indexing.ipynb +0 -0
  37. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_discovery/po.owl +0 -0
  38. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/__init__.py +0 -0
  39. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/main.ipynb +0 -0
  40. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/main.py +0 -0
  41. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/.gitignore +0 -0
  42. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/.notebook.env.example +0 -0
  43. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/bookkeeper.py +0 -0
  44. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/helpers.py +0 -0
  45. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/manual_test_bookkeeper.py +0 -0
  46. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/migrate_10_0_0_to_10_1_4.ipynb +0 -0
  47. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/migrate_10_3_0_to_10_4_0.ipynb +0 -0
  48. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/migrate_10_4_0_to_10_9_1.ipynb +0 -0
  49. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/migrate_10_9_1_to_11_0_0.ipynb +0 -0
  50. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/migrate_11_0_0_to_11_0_1.ipynb +0 -0
  51. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/migrate_7_7_2_to_7_8_0.ipynb +0 -0
  52. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/migrate_7_8_0_to_8_0_0.ipynb +0 -0
  53. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/migrate_8_0_0_to_8_1_2.ipynb +0 -0
  54. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/migrate_8_1_2_to_9_0_4.ipynb +0 -0
  55. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/migrate_9_0_4_to_9_1_0.ipynb +0 -0
  56. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/migrate_9_1_0_to_9_2_0.ipynb +0 -0
  57. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/migrate_9_3_2_to_10_0_0.ipynb +0 -0
  58. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/migrate_A_B_C_to_X_Y_Z.ipynb +0 -0
  59. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/mongosh-scripts/restore-privileges.mongo.js +0 -0
  60. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/mongosh-scripts/revoke-privileges.mongo.js +0 -0
  61. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/requirements.txt +0 -0
  62. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/stakeholders.md +0 -0
  63. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/demo/metadata_migration/notebooks/test_helpers.py +0 -0
  64. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docker-compose.test.yml +0 -0
  65. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docker-compose.yml +0 -0
  66. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/admin.md +0 -0
  67. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/contributing-docs.md +0 -0
  68. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/draft.md +0 -0
  69. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/explanation/domain-vision-statement.md +0 -0
  70. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/explanation/identifiers.md +0 -0
  71. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/explanation/journeys.md +0 -0
  72. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/howto-guides/author-changesheets.md +0 -0
  73. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/howto-guides/claim-and-run-jobs.md +0 -0
  74. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/howto-guides/create-triggers.md +0 -0
  75. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/howto-guides/improving-search-api.md +0 -0
  76. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/howto-guides/jobs/gold-translation-etl.md +0 -0
  77. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/howto-guides/release-process.md +0 -0
  78. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/howto-guides/update-sensors-ops.md +0 -0
  79. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/auth-button.png +0 -0
  80. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/auth-client-id.png +0 -0
  81. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/auth-close-modal.png +0 -0
  82. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/auth-username.png +0 -0
  83. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/dagit-apply-changesheet-job.png +0 -0
  84. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/dagster-translation-gold-job.png +0 -0
  85. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/dagster-translation-gold-launchpad.png +0 -0
  86. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/dagster-translation-gold-overview.png +0 -0
  87. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/dagster-translation-repo-jobs.png +0 -0
  88. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/dagster-workspace-repo-loaded.png +0 -0
  89. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/job-triggering.png +0 -0
  90. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/list-from-collection-filter.png +0 -0
  91. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/list-from-collection-page-token.png +0 -0
  92. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/list-from-collection.png +0 -0
  93. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/metadata-in-dagit-runs.png +0 -0
  94. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/metadata-in-put-types.png +0 -0
  95. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/nmdc-runtime-federation.png +0 -0
  96. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/rancher-nmdc-runtime-dev-workloads.png +0 -0
  97. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/validate-json-copy-paste-execute.png +0 -0
  98. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/validate-json-get-one-valid.png +0 -0
  99. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/validate-json-response.png +0 -0
  100. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/validate-json-try-it-out.png +0 -0
  101. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/img/validate-json.png +0 -0
  102. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/index.md +0 -0
  103. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/nb/bulk_validation_referential_integrity_check.ipynb +0 -0
  104. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/nb/get_data.ipynb +0 -0
  105. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/nb/queue_and_trigger_data_jobs.ipynb +0 -0
  106. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/nb/wf_automation.ipynb +0 -0
  107. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/stylesheets/extra.css +0 -0
  108. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/tutorials/auth.md +0 -0
  109. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/tutorials/json.md +0 -0
  110. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs/tutorials/metadata-in.md +0 -0
  111. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs_prev/design/api-resource-diagram.md +0 -0
  112. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs_prev/design/api-resource-layout.md +0 -0
  113. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs_prev/design/nmdc-runtime-api-resource-diagram.png +0 -0
  114. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs_prev/design/nmdc-wfe.ttl +0 -0
  115. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs_prev/design/redoc-static.html +0 -0
  116. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs_prev/design/spec.md +0 -0
  117. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs_prev/design/workflow-automation.md +0 -0
  118. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/docs_prev/index.html +0 -0
  119. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/flake.lock +0 -0
  120. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/flake.nix +0 -0
  121. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/github_secrets_to_dotenv.sh +0 -0
  122. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/guix-manifest.scm +0 -0
  123. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/Makefile +0 -0
  124. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/README.md +0 -0
  125. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/__init__.py +0 -0
  126. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/Froze_Core_2015_S2_0_10_7_Metab.json +0 -0
  127. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/MAGs_activity.json +0 -0
  128. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/biosample_test.json +0 -0
  129. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/changesheet-ex-01-screenshot.png +0 -0
  130. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/changesheet-ex-01.csv +0 -0
  131. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/emsl_data_object_test.json +0 -0
  132. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/emsl_project_test.json +0 -0
  133. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/feature-set.json +0 -0
  134. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/ftms_nom_data_products.json +0 -0
  135. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/functional-annotation.json +0 -0
  136. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/gcms_metabolomics_data_products.json +0 -0
  137. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/gold_project_test.json +0 -0
  138. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/img_mg_annotation_data_objects.json +0 -0
  139. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/img_mg_annotation_objects.json +0 -0
  140. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/metagenome_annotation_activity.json +0 -0
  141. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/mg_assembly_activities_test.json +0 -0
  142. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/mg_assembly_data_objects_test.json +0 -0
  143. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/migs-template-cedar.schema.json +0 -0
  144. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/nom_analysis_activity.json +0 -0
  145. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/readQC_activities_test.json +0 -0
  146. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/readQC_data_objects_test.json +0 -0
  147. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/read_based_analysis_activity.json +0 -0
  148. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/examples/study_test.json +0 -0
  149. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/images/nmdc-etl-workflow.drawio +0 -0
  150. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/images/nmdc-etl-workflow.png +0 -0
  151. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/images/nmdc-etl-workflow.svg +0 -0
  152. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/mapping-files/Description_MIxS_Packages_v5.docx +0 -0
  153. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/mapping-files/GOLD-Paths-to-MIxS-ENVO-triad-mapping.xlsx +0 -0
  154. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/mapping-files/MIxSair_20180621_GOLD_Mapping_04132020.xlsx +0 -0
  155. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/mapping-files/MIxSbuiltenv_20180621_GOLD_Mapping_04172020.xlsx +0 -0
  156. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/mapping-files/MIxShostassoc_20180621_GOLD_Mapping.xlsx +0 -0
  157. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/mapping-files/MIxShumanassoc_20180621_GOLD_Mapping_04142020.xlsx +0 -0
  158. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/mapping-files/MIxShumangut_20180621_GOLD_Mapping_04152020.xlsx +0 -0
  159. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/mapping-files/MIxShumanoral_20180621_GOLD_Mapping_04152020.xlsx +0 -0
  160. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/mapping-files/MIxShumanskin_20180621_GOLD_Mapping_04162020.xlsx +0 -0
  161. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/metadata-translation/mapping-files/MIxShumanvaginal_20180621_GOLD_04162020.xlsx +0 -0
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  479. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/files/test_changesheet_insert_study_doi.tsv +0 -0
  480. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/files/test_changesheet_update_bytes_ranged_slot.tsv +0 -0
  481. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/files/test_changesheet_update_one_ph.tsv +0 -0
  482. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/integration/test_minter_repository.py +0 -0
  483. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/mongodump-nmdc-testdb.sh +0 -0
  484. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/mongorestore-nmdc-testdb.sh +0 -0
  485. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/nmdcdb.test.archive.gz +0 -0
  486. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_api/__init__.py +0 -0
  487. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_api/test_db_mongo.py +0 -0
  488. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_api/test_endpoints.py +0 -0
  489. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_api/test_metadata.py +0 -0
  490. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_api/util.py +0 -0
  491. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_data/__init__.py +0 -0
  492. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_data/conftest.py +0 -0
  493. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_data/test_gold_translator.py +0 -0
  494. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_data/test_gold_translator_data.yaml +0 -0
  495. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_data/test_integrity.py +0 -0
  496. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_data/test_ncbi_xml.py +0 -0
  497. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_data/test_neon_benthic_data_translator.py +0 -0
  498. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_data/test_neon_soil_data_translator.py +0 -0
  499. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_data/test_submission_portal_translator.py +0 -0
  500. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_data/test_submission_portal_translator_data.yaml +0 -0
  501. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_graphs/__init__.py +0 -0
  502. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_graphs/ensure_jobs.py +0 -0
  503. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_graphs/test_hello.py +0 -0
  504. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_graphs/test_submission_portal_graphs.py +0 -0
  505. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_normalization/__init__.py +0 -0
  506. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_normalization/test_gold.py +0 -0
  507. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_ops/__init__.py +0 -0
  508. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_ops/test_data_api_ops.py +0 -0
  509. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_ops/test_get_csv_rows_from_url.py +0 -0
  510. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_ops/test_gold_api_ops.py +0 -0
  511. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_ops/test_materialize_alldocs.py +0 -0
  512. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_ops/test_ops.py +0 -0
  513. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/test_util.py +0 -0
  514. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/unit/core_util.py +0 -0
  515. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests/unit/test_minter_model.py +0 -0
  516. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests2/__init__.py +0 -0
  517. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests2/domain/__init__.py +0 -0
  518. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests2/domain/service/__init__.py +0 -0
  519. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tests2/domain/service/test_user_service.py +0 -0
  520. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/tmp.json +0 -0
  521. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/util/mongodump-nmdc.sh +0 -0
  522. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/util/mongorestore-nmdc.sh +0 -0
  523. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/wait-for-it.sh +0 -0
  524. {nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/workspace.toml +0 -0
{nmdc_runtime-2.0.0/nmdc_runtime.egg-info → nmdc_runtime-2.0.1}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: nmdc_runtime
3
- Version: 2.0.0
3
+ Version: 2.0.1
4
4
  Summary: A runtime system for NMDC data management and orchestration
5
5
  Home-page: https://github.com/microbiomedata/nmdc-runtime
6
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  Author: Donny Winston
{nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1/nmdc_runtime.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: nmdc_runtime
3
- Version: 2.0.0
3
+ Version: 2.0.1
4
4
  Summary: A runtime system for NMDC data management and orchestration
5
5
  Home-page: https://github.com/microbiomedata/nmdc-runtime
6
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  Author: Donny Winston
{nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/requirements/main.in RENAMED
@@ -25,7 +25,7 @@ mkdocs-jupyter
25
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  mkdocs-material
26
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  mkdocs-mermaid2-plugin
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  motor
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- nmdc-schema==11.0.1
28
+ nmdc-schema==11.0.3
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  openpyxl
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  pandas
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  passlib[bcrypt]
{nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/requirements/main.txt RENAMED
@@ -441,7 +441,7 @@ nbformat==5.10.4
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  # nbconvert
442
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  nest-asyncio==1.6.0
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  # via ipykernel
444
- nmdc-schema==11.0.1
444
+ nmdc-schema==11.0.3
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  # via -r requirements/main.in
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  notebook==7.2.2
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  # via jupyter
{nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.dockerignore RENAMED
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{nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/.env.example RENAMED
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{nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/LICENSE RENAMED
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{nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/Makefile RENAMED
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{nmdc_runtime-2.0.0 → nmdc_runtime-2.0.1}/README.md RENAMED
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