nettracer3d 0.7.8__tar.gz → 0.7.9__tar.gz

{nettracer3d-0.7.8/src/nettracer3d.egg-info → nettracer3d-0.7.9}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: nettracer3d
-Version: 0.7.8
+Version: 0.7.9
 Summary: Scripts for intializing and analyzing networks from segmentations of three dimensional images.
 Author-email: Liam McLaughlin <liamm@wustl.edu>
 Project-URL: Documentation, https://nettracer3d.readthedocs.io/en/latest/
@@ -73,14 +73,6 @@ NetTracer3D is free to use/fork for academic/nonprofit use so long as citation i
 
 NetTracer3D was developed by Liam McLaughlin while working under Dr. Sanjay Jain at Washington University School of Medicine.
 
--- Version 0.7.8 (and 0.7.7) Updates -- 
-
-	* Bug Fixes
-	* Added the excel helper loader for better automated loading from QuPath exports specifically
-	* Added the ability to cluster communities into broader neighborhoods (with KMeans) based on their compositions.
-	* Added heatmap and UMAP graph displays based on community compositions.
-	* Added the ability to show heatmaps of nodes based on their density within their communities
-	* Added the ability to cluster nodes into communities based on spatial grouping in arbitrarily-sized cells (rather than just using the network)
-	* Added function to crop the current image
-	* More options under 'Modify Network'
-	* 'Show 3D' method now can render a bounding box.
+-- Version 0.7.9 Updates -- 
+
+	* The GPU segmenter was being imported regardless of GPU status, causing the program to fail without cupy (which should be optional), fixed that.

{nettracer3d-0.7.8 → nettracer3d-0.7.9}/README.md

@@ -34,14 +34,6 @@ NetTracer3D is free to use/fork for academic/nonprofit use so long as citation i
 
 NetTracer3D was developed by Liam McLaughlin while working under Dr. Sanjay Jain at Washington University School of Medicine.
 
--- Version 0.7.8 (and 0.7.7) Updates -- 
-
-	* Bug Fixes
-	* Added the excel helper loader for better automated loading from QuPath exports specifically
-	* Added the ability to cluster communities into broader neighborhoods (with KMeans) based on their compositions.
-	* Added heatmap and UMAP graph displays based on community compositions.
-	* Added the ability to show heatmaps of nodes based on their density within their communities
-	* Added the ability to cluster nodes into communities based on spatial grouping in arbitrarily-sized cells (rather than just using the network)
-	* Added function to crop the current image
-	* More options under 'Modify Network'
-	* 'Show 3D' method now can render a bounding box.
+-- Version 0.7.9 Updates -- 
+
+	* The GPU segmenter was being imported regardless of GPU status, causing the program to fail without cupy (which should be optional), fixed that.

{nettracer3d-0.7.8 → nettracer3d-0.7.9}/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "nettracer3d"
-version = "0.7.8"
+version = "0.7.9"
 authors = [
   { name="Liam McLaughlin", email="liamm@wustl.edu" },
 ]

{nettracer3d-0.7.8 → nettracer3d-0.7.9}/src/nettracer3d/nettracer_gui.py

@@ -25,7 +25,10 @@ import multiprocessing as mp
 from concurrent.futures import ThreadPoolExecutor
 from functools import partial
 from nettracer3d import segmenter
-from nettracer3d import segmenter_GPU
+try:
+    from nettracer3d import segmenter_GPU as seg_GPU
+except:
+    pass
 from nettracer3d import excelotron
 
 
@@ -8290,7 +8293,7 @@ class MachineWindow(QMainWindow):
         if not GPU:
             self.segmenter = segmenter.InteractiveSegmenter(active_data, use_gpu=False)
         else:
-            self.segmenter = segmenter_GPU.InteractiveSegmenter(active_data)
+            self.segmenter = seg_GPU.InteractiveSegmenter(active_data)
 
         self.segmentation_worker = None
 
@@ -8396,7 +8399,7 @@ class MachineWindow(QMainWindow):
         if self.GPU.isChecked():
 
             try:
-                self.segmenter = segmenter_GPU.InteractiveSegmenter(active_data)
+                self.segmenter = seg_GPU.InteractiveSegmenter(active_data)
                 print("Using GPU")
             except:
                 self.GPU.setChecked(False)

{nettracer3d-0.7.8 → nettracer3d-0.7.9/src/nettracer3d.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: nettracer3d
-Version: 0.7.8
+Version: 0.7.9
 Summary: Scripts for intializing and analyzing networks from segmentations of three dimensional images.
 Author-email: Liam McLaughlin <liamm@wustl.edu>
 Project-URL: Documentation, https://nettracer3d.readthedocs.io/en/latest/
@@ -73,14 +73,6 @@ NetTracer3D is free to use/fork for academic/nonprofit use so long as citation i
 
 NetTracer3D was developed by Liam McLaughlin while working under Dr. Sanjay Jain at Washington University School of Medicine.
 
--- Version 0.7.8 (and 0.7.7) Updates -- 
-
-	* Bug Fixes
-	* Added the excel helper loader for better automated loading from QuPath exports specifically
-	* Added the ability to cluster communities into broader neighborhoods (with KMeans) based on their compositions.
-	* Added heatmap and UMAP graph displays based on community compositions.
-	* Added the ability to show heatmaps of nodes based on their density within their communities
-	* Added the ability to cluster nodes into communities based on spatial grouping in arbitrarily-sized cells (rather than just using the network)
-	* Added function to crop the current image
-	* More options under 'Modify Network'
-	* 'Show 3D' method now can render a bounding box.
+-- Version 0.7.9 Updates -- 
+
+	* The GPU segmenter was being imported regardless of GPU status, causing the program to fail without cupy (which should be optional), fixed that.