nettracer3d 0.5.8__tar.gz → 0.5.9__tar.gz

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Files changed (26) hide show
  1. {nettracer3d-0.5.8/src/nettracer3d.egg-info → nettracer3d-0.5.9}/PKG-INFO +3 -3
  2. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/README.md +2 -2
  3. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/pyproject.toml +1 -1
  4. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/segmenter.py +5 -2
  5. {nettracer3d-0.5.8 → nettracer3d-0.5.9/src/nettracer3d.egg-info}/PKG-INFO +3 -3
  6. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/LICENSE +0 -0
  7. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/setup.cfg +0 -0
  8. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/__init__.py +0 -0
  9. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/community_extractor.py +0 -0
  10. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/hub_getter.py +0 -0
  11. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/modularity.py +0 -0
  12. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/morphology.py +0 -0
  13. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/nettracer.py +0 -0
  14. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/nettracer_gui.py +0 -0
  15. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/network_analysis.py +0 -0
  16. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/network_draw.py +0 -0
  17. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/node_draw.py +0 -0
  18. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/proximity.py +0 -0
  19. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/run.py +0 -0
  20. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/simple_network.py +0 -0
  21. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/smart_dilate.py +0 -0
  22. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d.egg-info/SOURCES.txt +0 -0
  23. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d.egg-info/dependency_links.txt +0 -0
  24. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d.egg-info/entry_points.txt +0 -0
  25. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d.egg-info/requires.txt +0 -0
  26. {nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d.egg-info/top_level.txt +0 -0
{nettracer3d-0.5.8/src/nettracer3d.egg-info → nettracer3d-0.5.9}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.2
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  Name: nettracer3d
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- Version: 0.5.8
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+ Version: 0.5.9
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  Summary: Scripts for intializing and analyzing networks from segmentations of three dimensional images.
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  Author-email: Liam McLaughlin <mclaughlinliam99@gmail.com>
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  Project-URL: User_Tutorial, https://www.youtube.com/watch?v=cRatn5VTWDY
@@ -44,6 +44,6 @@ NetTracer3D is free to use/fork for academic/nonprofit use so long as citation i
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  NetTracer3D was developed by Liam McLaughlin while working under Dr. Sanjay Jain at Washington University School of Medicine.
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- -- Version 0.5.8 updates --
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+ -- Version 0.5.9 updates --
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- 1. Bug fixes and improvements on the 2d segmenter.
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+ 1. Bug fixes
{nettracer3d-0.5.8 → nettracer3d-0.5.9}/README.md RENAMED
@@ -8,6 +8,6 @@ NetTracer3D is free to use/fork for academic/nonprofit use so long as citation i
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  NetTracer3D was developed by Liam McLaughlin while working under Dr. Sanjay Jain at Washington University School of Medicine.
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- -- Version 0.5.8 updates --
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+ -- Version 0.5.9 updates --
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- 1. Bug fixes and improvements on the 2d segmenter.
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+ 1. Bug fixes
{nettracer3d-0.5.8 → nettracer3d-0.5.9}/pyproject.toml RENAMED
@@ -1,6 +1,6 @@
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  [project]
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  name = "nettracer3d"
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- version = "0.5.8"
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+ version = "0.5.9"
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  authors = [
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  { name="Liam McLaughlin", email="mclaughlinliam99@gmail.com" },
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  ]
{nettracer3d-0.5.8 → nettracer3d-0.5.9}/src/nettracer3d/segmenter.py RENAMED
@@ -1099,8 +1099,11 @@ class InteractiveSegmenter:
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  def cleanup(self):
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  """Clean up GPU memory"""
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  if self.use_gpu:
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- cp.get_default_memory_pool().free_all_blocks()
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- torch.cuda.empty_cache()
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+ try:
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+ cp.get_default_memory_pool().free_all_blocks()
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+ torch.cuda.empty_cache()
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+ except:
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+ pass
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  def train_batch(self, foreground_array, speed = True, use_gpu = False, use_two = False):
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  """Train directly on foreground and background arrays"""
{nettracer3d-0.5.8 → nettracer3d-0.5.9/src/nettracer3d.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.2
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  Name: nettracer3d
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- Version: 0.5.8
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+ Version: 0.5.9
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  Summary: Scripts for intializing and analyzing networks from segmentations of three dimensional images.
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  Author-email: Liam McLaughlin <mclaughlinliam99@gmail.com>
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  Project-URL: User_Tutorial, https://www.youtube.com/watch?v=cRatn5VTWDY
@@ -44,6 +44,6 @@ NetTracer3D is free to use/fork for academic/nonprofit use so long as citation i
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  NetTracer3D was developed by Liam McLaughlin while working under Dr. Sanjay Jain at Washington University School of Medicine.
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- -- Version 0.5.8 updates --
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+ -- Version 0.5.9 updates --
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- 1. Bug fixes and improvements on the 2d segmenter.
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+ 1. Bug fixes
{nettracer3d-0.5.8 → nettracer3d-0.5.9}/LICENSE RENAMED
File without changes
{nettracer3d-0.5.8 → nettracer3d-0.5.9}/setup.cfg RENAMED
File without changes