netoptim 0.1__tar.gz

netoptim-0.1/.coveragerc

@@ -0,0 +1,28 @@
+# .coveragerc to control coverage.py
+[run]
+branch = True
+source = netoptim
+# omit = bad_file.py
+
+[paths]
+source =
+    src/
+    */site-packages/
+
+[report]
+# Regexes for lines to exclude from consideration
+exclude_lines =
+    # Have to re-enable the standard pragma
+    pragma: no cover
+
+    # Don't complain about missing debug-only code:
+    def __repr__
+    if self\.debug
+
+    # Don't complain if tests don't hit defensive assertion code:
+    raise AssertionError
+    raise NotImplementedError
+
+    # Don't complain if non-runnable code isn't run:
+    if 0:
+    if __name__ == .__main__.:

netoptim-0.1/.flake8

@@ -0,0 +1,3 @@
+# Autoformatter friendly flake8 config (all formatting rules disabled)
+[flake8]
+extend-ignore = E1, E2, E3, E501, W1, W2, W3, W5

netoptim-0.1/.github/workflows/ci.bak

@@ -0,0 +1,128 @@
+# GitHub Actions configuration **EXAMPLE**,
+# MODIFY IT ACCORDING TO YOUR NEEDS!
+# Reference: https://docs.github.com/en/actions
+
+name: tests
+
+on:
+  push:
+    # Avoid using all the resources/limits available by checking only
+    # relevant branches and tags. Other branches can be checked via PRs.
+    branches: [master]
+    tags: ['v[0-9]*', '[0-9]+.[0-9]+*']  # Match tags that resemble a version
+  pull_request:  # Run in every PR
+  workflow_dispatch:  # Allow manually triggering the workflow
+  schedule:
+    # Run roughly every 15 days at 00:00 UTC
+    # (useful to check if updates on dependencies break the package)
+    - cron: '0 0 1,16 * *'
+
+permissions:
+  contents: read
+
+concurrency:
+  group: >-
+    ${{ github.workflow }}-${{ github.ref_type }}-
+    ${{ github.event.pull_request.number || github.sha }}
+  cancel-in-progress: true
+
+jobs:
+  prepare:
+    runs-on: ubuntu-latest
+    outputs:
+      wheel-distribution: ${{ steps.wheel-distribution.outputs.path }}
+    steps:
+      - uses: actions/checkout@v3
+        with: {fetch-depth: 0}  # deep clone for setuptools-scm
+      - uses: actions/setup-python@v4
+        id: setup-python
+        with: {python-version: "3.11"}
+      # - name: Run static analysis and format checkers
+      #   run: pipx run pre-commit run --all-files --show-diff-on-failure
+      - name: Build package distribution files
+        run: >-
+          pipx run --python '${{ steps.setup-python.outputs.python-path }}'
+          tox -e clean,build
+      - name: Record the path of wheel distribution
+        id: wheel-distribution
+        run: echo "path=$(ls dist/*.whl)" >> $GITHUB_OUTPUT
+      - name: Store the distribution files for use in other stages
+        # `tests` and `publish` will use the same pre-built distributions,
+        # so we make sure to release the exact same package that was tested
+        uses: actions/upload-artifact@v4
+        with:
+          name: python-distribution-files
+          path: dist/
+          retention-days: 1
+
+  test:
+    needs: prepare
+    strategy:
+      matrix:
+        python:
+        - "3.9"  # oldest Python supported by PSF
+        - "3.11"  # newest Python that is stable
+        platform:
+        - ubuntu-latest
+        - macos-latest
+        - windows-latest
+    runs-on: ${{ matrix.platform }}
+    steps:
+      - uses: actions/checkout@v3
+      - uses: actions/setup-python@v4
+        id: setup-python
+        with:
+          python-version: ${{ matrix.python }}
+      - name: Retrieve pre-built distribution files
+        uses: actions/download-artifact@v4
+        with: {name: python-distribution-files, path: dist/}
+      - name: Install dependencies
+        run: |
+          pip install git+https://github.com/luk036/mywheel.git
+      - name: Run tests
+        run: >-
+          pipx run --python '${{ steps.setup-python.outputs.python-path }}'
+          tox --installpkg '${{ needs.prepare.outputs.wheel-distribution }}'
+          -- -rFEx --durations 10 --color yes  # pytest args
+      - name: Generate coverage report
+        run: pipx run coverage lcov -o coverage.lcov
+      - name: Upload partial coverage report
+        uses: coverallsapp/github-action@master
+        with:
+          path-to-lcov: coverage.lcov
+          github-token: ${{ secrets.GITHUB_TOKEN }}
+          flag-name: ${{ matrix.platform }} - py${{ matrix.python }}
+          parallel: true
+
+  finalize:
+    needs: test
+    runs-on: ubuntu-latest
+    steps:
+      - name: Finalize coverage report
+        uses: coverallsapp/github-action@master
+        with:
+          github-token: ${{ secrets.GITHUB_TOKEN }}
+          parallel-finished: true
+
+  publish:
+    needs: finalize
+    if: ${{ github.event_name == 'push' && contains(github.ref, 'refs/tags/') }}
+    runs-on: ubuntu-latest
+    permissions:
+      contents: write
+    steps:
+      - uses: actions/checkout@v3
+      - uses: actions/setup-python@v4
+        with: {python-version: "3.11"}
+      - name: Retrieve pre-built distribution files
+        uses: actions/download-artifact@v4
+        with: {name: python-distribution-files, path: dist/}
+      - name: Publish Package
+        env:
+          # TODO: Set your PYPI_TOKEN as a secret using GitHub UI
+          # - https://pypi.org/help/#apitoken
+          # - https://docs.github.com/en/actions/security-guides/encrypted-secrets
+          TWINE_REPOSITORY: pypi
+          TWINE_USERNAME: __token__
+          TWINE_PASSWORD: ${{ secrets.PYPI_TOKEN }}
+        run: pipx run tox -e publish

netoptim-0.1/.github/workflows/jekyll-gh-pages.yml

@@ -0,0 +1,51 @@
+# Sample workflow for building and deploying a Jekyll site to GitHub Pages
+name: Deploy Jekyll with GitHub Pages dependencies preinstalled
+
+on:
+  # Runs on pushes targeting the default branch
+  push:
+    branches: ["master"]
+
+  # Allows you to run this workflow manually from the Actions tab
+  workflow_dispatch:
+
+# Sets permissions of the GITHUB_TOKEN to allow deployment to GitHub Pages
+permissions:
+  contents: read
+  pages: write
+  id-token: write
+
+# Allow only one concurrent deployment, skipping runs queued between the run in-progress and latest queued.
+# However, do NOT cancel in-progress runs as we want to allow these production deployments to complete.
+concurrency:
+  group: "pages"
+  cancel-in-progress: false
+
+jobs:
+  # Build job
+  build:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+      - name: Setup Pages
+        uses: actions/configure-pages@v5
+      - name: Build with Jekyll
+        uses: actions/jekyll-build-pages@v1
+        with:
+          source: ./
+          destination: ./_site
+      - name: Upload artifact
+        uses: actions/upload-pages-artifact@v3
+
+  # Deployment job
+  deploy:
+    environment:
+      name: github-pages
+      url: ${{ steps.deployment.outputs.page_url }}
+    runs-on: ubuntu-latest
+    needs: build
+    steps:
+      - name: Deploy to GitHub Pages
+        id: deployment
+        uses: actions/deploy-pages@v4

netoptim-0.1/.github/workflows/multi-platforms.bak

@@ -0,0 +1,37 @@
+name: Multi-Platforms
+on: [push]
+
+jobs:
+  miniconda:
+    name: Miniconda ${{ matrix.os }} for Python ${{ matrix.version }}
+    runs-on: ${{ matrix.os }}
+    strategy:
+      matrix:
+        os: ["ubuntu-latest", "windows-latest", "macos-latest"]
+        version: ["3.9", "3.11"]
+    steps:
+      - uses: actions/checkout@v2
+      - uses: conda-incubator/setup-miniconda@v2
+        with:
+          activate-environment: test
+          environment-file: environment.yml
+          python-version: ${{ matrix.version }}
+          auto-activate-base: false
+      - shell: bash -l {0}
+        run: |
+          conda info
+          conda list
+      - name: Lint
+        shell: bash -l {0}
+        run: |
+          conda install flake8
+          python -m flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
+          python -m flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
+      - name: Run pytest
+        shell: bash -l {0}
+        run: |
+          conda install pytest
+          git clone https://github.com/luk036/ellalgo.git
+          pip install ./ellalgo
+          python setup.py develop
+          pytest

netoptim-0.1/.github/workflows/multi-platforms.yml

@@ -0,0 +1,40 @@
+name: Multi-Platforms
+on: [push]
+
+jobs:
+  miniconda:
+    name: Miniconda ${{ matrix.os }} for Python ${{ matrix.version }}
+    runs-on: ${{ matrix.os }}
+    strategy:
+      matrix:
+        os: ["ubuntu-latest", "windows-latest"]
+        version: ["3.9", "3.12"]
+    steps:
+      - uses: actions/checkout@v2
+      - uses: conda-incubator/setup-miniconda@v2
+        with:
+          activate-environment: test
+          environment-file: environment.yml
+          python-version: ${{ matrix.version }}
+          auto-activate-base: false
+      - shell: bash -l {0}
+        run: |
+          conda info
+          conda list
+      - name: Lint
+        shell: bash -l {0}
+        run: |
+          conda install flake8
+          python -m flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
+          python -m flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
+      - name: Run pytest
+        shell: bash -l {0}
+        run: |
+          conda install pytest
+          python -m pip install --upgrade pip
+          if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
+          pip install git+https://github.com/luk036/mywheel.git
+          pip install git+https://github.com/luk036/ellalgo.git
+          pip install git+https://github.com/luk036/digraphx.git
+          python setup.py develop
+          pytest

netoptim-0.1/.github/workflows/python-app.yml

@@ -0,0 +1,48 @@
+# This workflow will install Python dependencies, run tests and lint with a single version of Python
+# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
+
+name: Python application
+
+on:
+  push:
+    branches: [master]
+  pull_request:
+    branches: [master]
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+
+    steps:
+      - uses: actions/checkout@v2
+      - name: Set up Python 3.9
+        uses: actions/setup-python@v2
+        with:
+          python-version: 3.9
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install flake8 pytest
+          if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
+          pip install git+https://github.com/luk036/ellalgo.git
+          pip install git+https://github.com/luk036/mywheel.git
+          pip install git+https://github.com/luk036/digraphx.git
+          python setup.py develop
+      # - name: Lint with flake8
+      #   run: |
+      #     # stop the build if there are Python syntax errors or undefined names
+      #     flake8 ./src/csdigit --count --select=E9,F63,F7,F82 --show-source --statistics
+      #     # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
+      #     flake8 ./src/csdigit --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
+      - name: Test with pytest
+        run: |
+          pytest --cov=src
+      - name: Codecov
+        # You may pin to the exact commit or the version.
+        # uses: codecov/codecov-action@29386c70ef20e286228c72b668a06fd0e8399192
+        uses: codecov/codecov-action@v1.5.2
+        with:
+          # Repository upload token - get it from codecov.io. Required only for private repositories
+          token: ${{ secrets.CODECOV_TOKEN }}
+          # Comma-separated list of files to upload
+          fail_ci_if_error: true

netoptim-0.1/.github/workflows/python-package.yml

@@ -0,0 +1,44 @@
+# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
+# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
+
+name: Python package
+
+on:
+  push:
+    branches: [master]
+  pull_request:
+    branches: [master]
+
+jobs:
+  build:
+    runs-on: ubuntu-latest
+    strategy:
+      fail-fast: false
+      matrix:
+        python-version: ["3.9", "3.12"]
+
+    steps:
+      - uses: actions/checkout@v2
+      - name: Set up Python ${{ matrix.python-version }}
+        uses: actions/setup-python@v4
+        with:
+          python-version: ${{ matrix.python-version }}
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          python -m pip install flake8 pytest
+          if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
+          pip install setuptools
+          pip install git+https://github.com/luk036/ellalgo.git
+          pip install git+https://github.com/luk036/mywheel.git
+          pip install git+https://github.com/luk036/digraphx.git
+          python setup.py develop
+      - name: Lint with flake8
+        run: |
+          # stop the build if there are Python syntax errors or undefined names
+          flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
+          # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
+          flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
+      - name: Test with pytest
+        run: |
+          pytest

netoptim-0.1/.github/workflows/python-publish.yml

@@ -0,0 +1,70 @@
+# This workflow will upload a Python Package to PyPI when a release is created
+# For more information see: https://docs.github.com/en/actions/automating-builds-and-tests/building-and-testing-python#publishing-to-package-registries
+
+# This workflow uses actions that are not certified by GitHub.
+# They are provided by a third-party and are governed by
+# separate terms of service, privacy policy, and support
+# documentation.
+
+name: Upload Python Package
+
+on:
+  release:
+    types: [published]
+
+permissions:
+  contents: read
+
+jobs:
+  release-build:
+    runs-on: ubuntu-latest
+
+    steps:
+      - uses: actions/checkout@v4
+
+      - uses: actions/setup-python@v5
+        with:
+          python-version: "3.x"
+
+      - name: Build release distributions
+        run: |
+          # NOTE: put your own distribution build steps here.
+          python -m pip install build
+          python -m build
+
+      - name: Upload distributions
+        uses: actions/upload-artifact@v4
+        with:
+          name: release-dists
+          path: dist/
+
+  pypi-publish:
+    runs-on: ubuntu-latest
+    needs:
+      - release-build
+    permissions:
+      # IMPORTANT: this permission is mandatory for trusted publishing
+      id-token: write
+
+    # Dedicated environments with protections for publishing are strongly recommended.
+    # For more information, see: https://docs.github.com/en/actions/deployment/targeting-different-environments/using-environments-for-deployment#deployment-protection-rules
+    environment:
+      name: pypi
+      # OPTIONAL: uncomment and update to include your PyPI project URL in the deployment status:
+      # url: https://pypi.org/p/YOURPROJECT
+      #
+      # ALTERNATIVE: if your GitHub Release name is the PyPI project version string
+      # ALTERNATIVE: exactly, uncomment the following line instead:
+      # url: https://pypi.org/project/YOURPROJECT/${{ github.event.release.name }}
+
+    steps:
+      - name: Retrieve release distributions
+        uses: actions/download-artifact@v4
+        with:
+          name: release-dists
+          path: dist/
+
+      - name: Publish release distributions to PyPI
+        uses: pypa/gh-action-pypi-publish@release/v1
+        with:
+          packages-dir: dist/

netoptim-0.1/.gitignore

@@ -0,0 +1,178 @@
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+cover/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+.pybuilder/
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+#   For a library or package, you might want to ignore these files since the code is
+#   intended to run in multiple environments; otherwise, check them in:
+# .python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# poetry
+#   Similar to Pipfile.lock, it is generally recommended to include poetry.lock in version control.
+#   This is especially recommended for binary packages to ensure reproducibility, and is more
+#   commonly ignored for libraries.
+#   https://python-poetry.org/docs/basic-usage/#commit-your-poetrylock-file-to-version-control
+#poetry.lock
+
+# pdm
+#   Similar to Pipfile.lock, it is generally recommended to include pdm.lock in version control.
+#pdm.lock
+#   pdm stores project-wide configurations in .pdm.toml, but it is recommended to not include it
+#   in version control.
+#   https://pdm.fming.dev/#use-with-ide
+.pdm.toml
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow and github.com/pdm-project/pdm
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/
+
+# pytype static type analyzer
+.pytype/
+
+# Cython debug symbols
+cython_debug/
+
+# PyCharm
+#  JetBrains specific template is maintained in a separate JetBrains.gitignore that can
+#  be found at https://github.com/github/gitignore/blob/main/Global/JetBrains.gitignore
+#  and can be added to the global gitignore or merged into this file.  For a more nuclear
+#  option (not recommended) you can uncomment the following to ignore the entire idea folder.
+#.idea/
+
+# Build and docs folder/files
+build/*
+dist/*
+sdist/*
+docs/api/*
+docs/_rst/*
+docs/_build/*
+cover/*
+MANIFEST
+
+# Per-project virtualenvs
+.venv*/
+.conda*/
+.python-version
+
+# my stuffs
+.hypothesis

netoptim-0.1/.gitpod.yml

@@ -0,0 +1,6 @@
+tasks:
+  - command: >
+      pip3 install -r ./requirements.txt &&
+      python3 setup.py develop
+image:
+  file: .gitpod.Dockerfile

netoptim-0.1/.isort.cfg

@@ -0,0 +1,3 @@
+[settings]
+profile = black
+known_first_party = netoptim

netoptim-0.1/.markdownlint.json

@@ -0,0 +1,9 @@
+{
+  "default": true,
+  "MD003": { "style": "setext_with_atx" },
+  "MD007": { "indent": 4 },
+  "MD013": { "line_length": 500 },
+  "MD026": { "punctuation": ",;:!" },
+  "MD030": { "ul_single": 3, "ol_single": 2, "ul_multi": 3, "ol_multi": 2 },
+  "no-hard-tabs": false
+}