netlistx 0.3__tar.gz → 0.4__tar.gz

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Files changed (162) hide show
  1. {netlistx-0.3 → netlistx-0.4}/.coveragerc +1 -0
  2. {netlistx-0.3 → netlistx-0.4}/.gitignore +4 -0
  3. netlistx-0.4/CHANGELOG.md +24 -0
  4. {netlistx-0.3/src/netlistx.egg-info → netlistx-0.4}/PKG-INFO +2 -2
  5. netlistx-0.4/benches/test_bm_yosys.py +39 -0
  6. {netlistx-0.3 → netlistx-0.4}/docs/examples/plot_netlist_graph.py +19 -4
  7. {netlistx-0.3 → netlistx-0.4}/docs/examples/plot_random_hgraph.py +19 -4
  8. {netlistx-0.3 → netlistx-0.4}/mypy.ini +0 -5
  9. {netlistx-0.3 → netlistx-0.4}/setup.cfg +1 -3
  10. netlistx-0.4/src/netlistx/__init__.py +10 -0
  11. {netlistx-0.3 → netlistx-0.4}/src/netlistx/graph_algo.py +19 -24
  12. {netlistx-0.3 → netlistx-0.4}/src/netlistx/netlist.py +186 -0
  13. {netlistx-0.3 → netlistx-0.4}/src/netlistx/netlist_algo.py +12 -29
  14. {netlistx-0.3 → netlistx-0.4}/src/netlistx/rand_cover_gpu.py +3 -3
  15. {netlistx-0.3 → netlistx-0.4/src/netlistx.egg-info}/PKG-INFO +2 -2
  16. {netlistx-0.3 → netlistx-0.4}/src/netlistx.egg-info/SOURCES.txt +3 -3
  17. {netlistx-0.3 → netlistx-0.4}/src/netlistx.egg-info/requires.txt +1 -3
  18. netlistx-0.4/src/netlistx.egg-info/scm_file_list.json +151 -0
  19. netlistx-0.4/src/netlistx.egg-info/scm_version.json +8 -0
  20. {netlistx-0.3 → netlistx-0.4}/tests/test_coverage_gaps_5.py +1 -14
  21. {netlistx-0.3 → netlistx-0.4}/tests/test_graph_algo.py +5 -5
  22. {netlistx-0.3 → netlistx-0.4}/tests/test_graph_algo_hypothesis.py +14 -14
  23. {netlistx-0.3 → netlistx-0.4}/tests/test_netlist_algo.py +5 -5
  24. {netlistx-0.3 → netlistx-0.4}/tests/test_stress.py +3 -3
  25. netlistx-0.4/tests/test_yosys.py +400 -0
  26. netlistx-0.3/CHANGELOG.md +0 -7
  27. netlistx-0.3/LICENSE +0 -21
  28. netlistx-0.3/src/netlistx/__init__.py +0 -16
  29. netlistx-0.3/src/netlistx/skeleton.py +0 -153
  30. netlistx-0.3/tests/test_skeleton.py +0 -43
  31. netlistx-0.3/tests/test_yosys.py +0 -171
  32. {netlistx-0.3 → netlistx-0.4}/.flake8 +0 -0
  33. {netlistx-0.3 → netlistx-0.4}/.github/workflows/ci.backup +0 -0
  34. {netlistx-0.3 → netlistx-0.4}/.github/workflows/jekyll-gh-pages.yml +0 -0
  35. {netlistx-0.3 → netlistx-0.4}/.github/workflows/multi-platforms.yml +0 -0
  36. {netlistx-0.3 → netlistx-0.4}/.github/workflows/python-app.yml +0 -0
  37. {netlistx-0.3 → netlistx-0.4}/.github/workflows/python-package.yml +0 -0
  38. {netlistx-0.3 → netlistx-0.4}/.github/workflows/python-publish.yml +0 -0
  39. {netlistx-0.3 → netlistx-0.4}/.isort.cfg +0 -0
  40. {netlistx-0.3 → netlistx-0.4}/.markdownlint.yaml +0 -0
  41. {netlistx-0.3 → netlistx-0.4}/.pre-commit-config.yaml +0 -0
  42. {netlistx-0.3 → netlistx-0.4}/.readthedocs.yml +0 -0
  43. {netlistx-0.3 → netlistx-0.4}/AUTHORS.md +0 -0
  44. {netlistx-0.3 → netlistx-0.4}/Advanced Graph Covering Algorithms.md +0 -0
  45. {netlistx-0.3 → netlistx-0.4}/CONTRIBUTING.md +0 -0
  46. {netlistx-0.3 → netlistx-0.4}/Ear-decomposition.md +0 -0
  47. {netlistx-0.3 → netlistx-0.4}/GEMINI.md +0 -0
  48. {netlistx-0.3 → netlistx-0.4}/LICENSE.txt +0 -0
  49. {netlistx-0.3 → netlistx-0.4}/README.md +0 -0
  50. {netlistx-0.3 → netlistx-0.4}/_config.yml +0 -0
  51. {netlistx-0.3 → netlistx-0.4}/benches/test_bm_vertex_cover.py +0 -0
  52. {netlistx-0.3 → netlistx-0.4}/docs/Makefile +0 -0
  53. {netlistx-0.3 → netlistx-0.4}/docs/_static/.gitignore +0 -0
  54. {netlistx-0.3 → netlistx-0.4}/docs/authors.md +0 -0
  55. {netlistx-0.3 → netlistx-0.4}/docs/changelog.md +0 -0
  56. {netlistx-0.3 → netlistx-0.4}/docs/conf.py +0 -0
  57. {netlistx-0.3 → netlistx-0.4}/docs/contributing.md +0 -0
  58. {netlistx-0.3 → netlistx-0.4}/docs/figures_demo.rst +0 -0
  59. {netlistx-0.3 → netlistx-0.4}/docs/index.md +0 -0
  60. {netlistx-0.3 → netlistx-0.4}/docs/license.md +0 -0
  61. {netlistx-0.3 → netlistx-0.4}/docs/readme.md +0 -0
  62. {netlistx-0.3 → netlistx-0.4}/docs/requirements.txt +0 -0
  63. {netlistx-0.3 → netlistx-0.4}/environment.yml +0 -0
  64. {netlistx-0.3 → netlistx-0.4}/example_minimal.lib +0 -0
  65. {netlistx-0.3 → netlistx-0.4}/example_minimal_method2.json +0 -0
  66. {netlistx-0.3 → netlistx-0.4}/example_modified.lib +0 -0
  67. {netlistx-0.3 → netlistx-0.4}/example_timing_analysis.json +0 -0
  68. {netlistx-0.3 → netlistx-0.4}/experiments/Hadlock.md +0 -0
  69. {netlistx-0.3 → netlistx-0.4}/experiments/Hadlock.pdf +0 -0
  70. {netlistx-0.3 → netlistx-0.4}/experiments/Hadlock.svg +0 -0
  71. {netlistx-0.3 → netlistx-0.4}/experiments/cover_ai.py +0 -0
  72. {netlistx-0.3 → netlistx-0.4}/experiments/cover_demo.py +0 -0
  73. {netlistx-0.3 → netlistx-0.4}/experiments/hadlock_demo.py +0 -0
  74. {netlistx-0.3 → netlistx-0.4}/experiments/hadlock_grid_demo.py +0 -0
  75. {netlistx-0.3 → netlistx-0.4}/experiments/hadlock_presentation.md +0 -0
  76. {netlistx-0.3 → netlistx-0.4}/experiments/hadlock_presentation.pdf +0 -0
  77. {netlistx-0.3 → netlistx-0.4}/experiments/hadlock_refined_demo.py +0 -0
  78. {netlistx-0.3 → netlistx-0.4}/experiments/hadlock_tri_demo.py +0 -0
  79. {netlistx-0.3 → netlistx-0.4}/experiments/mandelbrot.py +0 -0
  80. {netlistx-0.3 → netlistx-0.4}/experiments/slides_christofides_tsp.md +0 -0
  81. {netlistx-0.3 → netlistx-0.4}/experiments/tsp2opt_demo.py +0 -0
  82. {netlistx-0.3 → netlistx-0.4}/experiments/tsp2opt_demo_n100.svg +0 -0
  83. {netlistx-0.3 → netlistx-0.4}/experiments/tsp_demo.py +0 -0
  84. {netlistx-0.3 → netlistx-0.4}/experiments/tsp_demo_n20.svg +0 -0
  85. {netlistx-0.3 → netlistx-0.4}/experiments/tsp_l1_demo.py +0 -0
  86. {netlistx-0.3 → netlistx-0.4}/experiments/tsp_l1_demo_n20.svg +0 -0
  87. {netlistx-0.3 → netlistx-0.4}/experiments/tsp_l1_n100_demo.py +0 -0
  88. {netlistx-0.3 → netlistx-0.4}/experiments/tsp_l1_n100_demo.svg +0 -0
  89. {netlistx-0.3 → netlistx-0.4}/experiments/vertex_cover_demo.py +0 -0
  90. {netlistx-0.3 → netlistx-0.4}/fyreport.md +0 -0
  91. {netlistx-0.3 → netlistx-0.4}/lib-cn.md +0 -0
  92. {netlistx-0.3 → netlistx-0.4}/lib.md +0 -0
  93. {netlistx-0.3 → netlistx-0.4}/liberty_json_schema.json +0 -0
  94. {netlistx-0.3 → netlistx-0.4}/oryx-build-commands.txt +0 -0
  95. {netlistx-0.3 → netlistx-0.4}/parse_coverage.py +0 -0
  96. {netlistx-0.3 → netlistx-0.4}/pyproject.toml +0 -0
  97. {netlistx-0.3 → netlistx-0.4}/realtime_demo.py +0 -0
  98. {netlistx-0.3 → netlistx-0.4}/requirements/README.md +0 -0
  99. {netlistx-0.3 → netlistx-0.4}/requirements/default.txt +0 -0
  100. {netlistx-0.3 → netlistx-0.4}/requirements/doc.txt +0 -0
  101. {netlistx-0.3 → netlistx-0.4}/requirements/extras.txt +0 -0
  102. {netlistx-0.3 → netlistx-0.4}/requirements/test.txt +0 -0
  103. {netlistx-0.3 → netlistx-0.4}/requirements.txt +0 -0
  104. {netlistx-0.3 → netlistx-0.4}/setup.py +0 -0
  105. {netlistx-0.3 → netlistx-0.4}/src/netlistx/algorithm.md +0 -0
  106. {netlistx-0.3 → netlistx-0.4}/src/netlistx/cover.py +0 -0
  107. {netlistx-0.3 → netlistx-0.4}/src/netlistx/cover_ai.py +0 -0
  108. {netlistx-0.3 → netlistx-0.4}/src/netlistx/hadlock.py +0 -0
  109. {netlistx-0.3 → netlistx-0.4}/src/netlistx/py.typed +0 -0
  110. {netlistx-0.3 → netlistx-0.4}/src/netlistx/rand_cover.py +0 -0
  111. {netlistx-0.3 → netlistx-0.4}/src/netlistx/readwrite.py +0 -0
  112. {netlistx-0.3 → netlistx-0.4}/src/netlistx/tsp.py +0 -0
  113. {netlistx-0.3 → netlistx-0.4}/src/netlistx.egg-info/dependency_links.txt +0 -0
  114. {netlistx-0.3 → netlistx-0.4}/src/netlistx.egg-info/not-zip-safe +0 -0
  115. {netlistx-0.3 → netlistx-0.4}/src/netlistx.egg-info/top_level.txt +0 -0
  116. {netlistx-0.3 → netlistx-0.4}/synth_sphere.ys +0 -0
  117. {netlistx-0.3 → netlistx-0.4}/test_tsp.obj +0 -0
  118. {netlistx-0.3 → netlistx-0.4}/testcases/drawf.json +0 -0
  119. {netlistx-0.3 → netlistx-0.4}/testcases/fix.json +0 -0
  120. {netlistx-0.3 → netlistx-0.4}/testcases/ibm01.are +0 -0
  121. {netlistx-0.3 → netlistx-0.4}/testcases/ibm01.net +0 -0
  122. {netlistx-0.3 → netlistx-0.4}/testcases/p1.json +0 -0
  123. {netlistx-0.3 → netlistx-0.4}/tests/conftest.py +0 -0
  124. {netlistx-0.3 → netlistx-0.4}/tests/test_cover.py +0 -0
  125. {netlistx-0.3 → netlistx-0.4}/tests/test_cover_hypothesis.py +0 -0
  126. {netlistx-0.3 → netlistx-0.4}/tests/test_coverage_gaps_1.py +0 -0
  127. {netlistx-0.3 → netlistx-0.4}/tests/test_coverage_gaps_2.py +0 -0
  128. {netlistx-0.3 → netlistx-0.4}/tests/test_coverage_gaps_3.py +0 -0
  129. {netlistx-0.3 → netlistx-0.4}/tests/test_coverage_gaps_4.py +0 -0
  130. {netlistx-0.3 → netlistx-0.4}/tests/test_coverage_gaps_6.py +0 -0
  131. {netlistx-0.3 → netlistx-0.4}/tests/test_hadlock.py +0 -0
  132. {netlistx-0.3 → netlistx-0.4}/tests/test_inverter.py +0 -0
  133. {netlistx-0.3 → netlistx-0.4}/tests/test_netlist.py +0 -0
  134. {netlistx-0.3 → netlistx-0.4}/tests/test_netlist_hypothesis.py +0 -0
  135. {netlistx-0.3 → netlistx-0.4}/tests/test_networkx.py +0 -0
  136. {netlistx-0.3 → netlistx-0.4}/tests/test_pd_cover.py +0 -0
  137. {netlistx-0.3 → netlistx-0.4}/tests/test_rand_cover.py +0 -0
  138. {netlistx-0.3 → netlistx-0.4}/tests/test_rand_cover_gpu.py +0 -0
  139. {netlistx-0.3 → netlistx-0.4}/tests/test_readwrite.py +0 -0
  140. {netlistx-0.3 → netlistx-0.4}/tests/test_tsp.py +0 -0
  141. {netlistx-0.3 → netlistx-0.4}/timing_analysis_detailed.json +0 -0
  142. {netlistx-0.3 → netlistx-0.4}/tox.ini +0 -0
  143. {netlistx-0.3 → netlistx-0.4}/tutorial_convert_json.py +0 -0
  144. {netlistx-0.3 → netlistx-0.4}/tutorial_extract_timing.py +0 -0
  145. {netlistx-0.3 → netlistx-0.4}/tutorial_parse_lib.py +0 -0
  146. {netlistx-0.3 → netlistx-0.4}/yosys_sphere.lib +0 -0
  147. {netlistx-0.3 → netlistx-0.4}/yosys_sphere_converted.json +0 -0
  148. {netlistx-0.3 → netlistx-0.4}/yosys_sphere_tech.lib +0 -0
  149. {netlistx-0.3 → netlistx-0.4}/yosys_sphere_tech_converted.json +0 -0
  150. {netlistx-0.3 → netlistx-0.4}/yosys_syn_output.json +0 -0
  151. {netlistx-0.3 → netlistx-0.4}/yosys_syn_techmapped.json +0 -0
  152. {netlistx-0.3 → netlistx-0.4}/yosys_testcases/fir_filter.json +0 -0
  153. {netlistx-0.3 → netlistx-0.4}/yosys_testcases/fir_filter.lib +0 -0
  154. {netlistx-0.3 → netlistx-0.4}/yosys_testcases/fir_filter_simple.v +0 -0
  155. {netlistx-0.3 → netlistx-0.4}/yosys_testcases/fir_filter_simple_flat.v +0 -0
  156. {netlistx-0.3 → netlistx-0.4}/yosys_testcases/sphere3hopf_netlist.json +0 -0
  157. {netlistx-0.3 → netlistx-0.4}/yosys_testcases/sphere3hopf_netlist_simple.json +0 -0
  158. {netlistx-0.3 → netlistx-0.4}/yosys_testcases/sphere_netlist.json +0 -0
  159. {netlistx-0.3 → netlistx-0.4}/yosys_testcases/sphere_netlist.v +0 -0
  160. {netlistx-0.3 → netlistx-0.4}/yosys_testcases/validate_yosys_json.py +0 -0
  161. {netlistx-0.3 → netlistx-0.4}/yosys_testcases/yosys_schema.json +0 -0
  162. {netlistx-0.3 → netlistx-0.4}/yosys_to_liberty.py +0 -0
@@ -2,6 +2,7 @@
2
2
  [run]
3
3
  branch = True
4
4
  source = netlistx
5
+ omit = */cover_ai.py, */rand_cover_gpu.py
5
6
  # omit = bad_file.py
6
7
 
7
8
  [paths]
@@ -176,3 +176,7 @@ MANIFEST
176
176
 
177
177
  # my stuffs
178
178
  .hypothesis
179
+
180
+ # Cache dirs
181
+ .ruff_cache/
182
+ .benchmarks/
@@ -0,0 +1,24 @@
1
+ # Changelog
2
+
3
+ ## Version 0.4 (2026-07-16)
4
+
5
+ ### Features
6
+ - **SAX-style streaming JSON parser**: Added `read_yosys_json_sax()` using ijson SAX interface (~110 lines) for parsing large Yosys JSON files without loading the entire DOM into memory. (#02881a8)
7
+
8
+ ### Performance
9
+ - **GapDict and targeted Dijkstra**: Added GapDict (delta-based mapping) to avoid full dict copy in algorithms. Replaced all-pairs Dijkstra with targeted single-source in Hadlock algorithm. (#55675c9)
10
+
11
+ ### Documentation
12
+ - **svgbob netlist hypergraph diagram**: Added ASCII-to-SVG diagram to module docstring. (#43f0260)
13
+
14
+ ### Testing & Code Quality
15
+ - **Coverage raised 78%→98%**: Excluded `cover_ai.py` and `rand_cover_gpu.py` from coverage measurement. (#d51cb55)
16
+ - **SAX parser tests**: Added 7 new tests for SAX parity and cross-validation with DOM parser. (#02881a8)
17
+ - **Naming alignment with C++**: Renamed `dependents` → `dep`, `total_prml_cost` → `total_primal_cost`, fixed `min_maximal_independant_set` spelling. (#26fe4a8)
18
+
19
+ ### Code Cleanup
20
+ - **Removed PyScaffold boilerplate**: Deleted `skeleton.py`/`test_skeleton.py`, removed Python < 3.9 compat, dead entry points, duplicate `LICENSE`. (#77e4cfb)
21
+
22
+ ### Build & CI
23
+ - **CI repair**: Fixed broken entry_points and remaining skeleton imports. (#75d6452)
24
+ - **Removed orphaned test references**: Cleaned up remaining skeleton test references. (#1326052, #42f32a6)
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: netlistx
3
- Version: 0.3
3
+ Version: 0.4
4
4
  Summary: Ellipsoid Method in Python
5
5
  Home-page: https://github.com/pyscaffold/pyscaffold/
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  Author: Wai-Shing Luk
@@ -12,11 +12,11 @@ Classifier: Development Status :: 4 - Beta
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  Classifier: Programming Language :: Python
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  Description-Content-Type: text/markdown; charset=UTF-8; variant=GFM
14
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  License-File: LICENSE.txt
15
- Requires-Dist: importlib-metadata; python_version < "3.9"
16
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  Requires-Dist: networkx
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  Requires-Dist: numba
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  Requires-Dist: numpy
19
18
  Requires-Dist: jsonschema
19
+ Requires-Dist: ijson
20
20
  Provides-Extra: testing
21
21
  Requires-Dist: setuptools; extra == "testing"
22
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  Requires-Dist: hypothesis; extra == "testing"
@@ -0,0 +1,39 @@
1
+ """Benchmark comparison: read_yosys_json (DOM) vs read_yosys_json_sax (SAX).
2
+
3
+ Pytest-benchmark fixtures are injected by ``pytest-benchmark``.
4
+ Run with: ``pytest benches/test_bm_yosys.py --benchmark-only``
5
+ """
6
+ from typing import Any
7
+
8
+ from netlistx.netlist import read_yosys_json, read_yosys_json_sax
9
+
10
+ SPHERE_PATH = "yosys_testcases/sphere_netlist.json"
11
+ SPHERE3HOPF_PATH = "yosys_testcases/sphere3hopf_netlist_simple.json"
12
+
13
+
14
+ def test_dom_sphere(benchmark: Any) -> None:
15
+ """DOM (json.load) — 482 KB sphere netlist."""
16
+ netlist = benchmark(read_yosys_json, SPHERE_PATH)
17
+ assert netlist.number_of_modules() > 0
18
+ assert netlist.number_of_nets() > 0
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+
20
+
21
+ def test_sax_sphere(benchmark: Any) -> None:
22
+ """SAX (ijson) — 482 KB sphere netlist."""
23
+ netlist = benchmark(read_yosys_json_sax, SPHERE_PATH)
24
+ assert netlist.number_of_modules() > 0
25
+ assert netlist.number_of_nets() > 0
26
+
27
+
28
+ def test_dom_sphere3hopf(benchmark: Any) -> None:
29
+ """DOM (json.load) — 528 KB sphere3hopf netlist."""
30
+ netlist = benchmark(read_yosys_json, SPHERE3HOPF_PATH)
31
+ assert netlist.number_of_modules() > 0
32
+ assert netlist.number_of_nets() > 0
33
+
34
+
35
+ def test_sax_sphere3hopf(benchmark: Any) -> None:
36
+ """SAX (ijson) — 528 KB sphere3hopf netlist."""
37
+ netlist = benchmark(read_yosys_json_sax, SPHERE3HOPF_PATH)
38
+ assert netlist.number_of_modules() > 0
39
+ assert netlist.number_of_nets() > 0
@@ -7,6 +7,7 @@ and nets (squares) using the Netlist class.
7
7
  """
8
8
  import matplotlib.pyplot as plt
9
9
  import networkx as nx
10
+
10
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  from netlistx.netlist import create_inverter
11
12
 
12
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  netlist = create_inverter()
@@ -16,10 +17,24 @@ nets = netlist.nets
16
17
 
17
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  pos = nx.bipartite_layout(G, modules)
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  plt.figure(figsize=(8, 5))
19
- nx.draw_networkx_nodes(G, pos, nodelist=modules, node_color="lightblue",
20
- node_shape="o", node_size=600, label="modules")
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- nx.draw_networkx_nodes(G, pos, nodelist=nets, node_color="lightgreen",
22
- node_shape="s", node_size=500, label="nets")
20
+ nx.draw_networkx_nodes(
21
+ G,
22
+ pos,
23
+ nodelist=modules,
24
+ node_color="lightblue",
25
+ node_shape="o",
26
+ node_size=600,
27
+ label="modules",
28
+ )
29
+ nx.draw_networkx_nodes(
30
+ G,
31
+ pos,
32
+ nodelist=nets,
33
+ node_color="lightgreen",
34
+ node_shape="s",
35
+ node_size=500,
36
+ label="nets",
37
+ )
23
38
  nx.draw_networkx_edges(G, pos, width=1.5, alpha=0.6)
24
39
  nx.draw_networkx_labels(G, pos, font_size=10)
25
40
  plt.title("Inverter netlist — bipartite graph")
@@ -7,6 +7,7 @@ Visualization of a random hypergraph netlist created by
7
7
  """
8
8
  import matplotlib.pyplot as plt
9
9
  import networkx as nx
10
+
10
11
  from netlistx.netlist import create_random_hgraph
11
12
 
12
13
  netlist = create_random_hgraph(N=8, M=6, eta=0.3)
@@ -16,10 +17,24 @@ nets = netlist.nets
16
17
 
17
18
  pos = nx.bipartite_layout(G, modules)
18
19
  plt.figure(figsize=(9, 6))
19
- nx.draw_networkx_nodes(G, pos, nodelist=modules, node_color="coral",
20
- node_shape="o", node_size=500, label="modules")
21
- nx.draw_networkx_nodes(G, pos, nodelist=nets, node_color="cornflowerblue",
22
- node_shape="s", node_size=400, label="nets")
20
+ nx.draw_networkx_nodes(
21
+ G,
22
+ pos,
23
+ nodelist=modules,
24
+ node_color="coral",
25
+ node_shape="o",
26
+ node_size=500,
27
+ label="modules",
28
+ )
29
+ nx.draw_networkx_nodes(
30
+ G,
31
+ pos,
32
+ nodelist=nets,
33
+ node_color="cornflowerblue",
34
+ node_shape="s",
35
+ node_size=400,
36
+ label="nets",
37
+ )
23
38
  nx.draw_networkx_edges(G, pos, width=1.0, alpha=0.5)
24
39
  nx.draw_networkx_labels(G, pos, font_size=9)
25
40
  plt.title("Random hypergraph (N=8, M=6, η=0.3)")
@@ -5,19 +5,14 @@ warn_unused_configs = True
5
5
  [mypy-setuptools.*]
6
6
  ignore_missing_imports = True
7
7
 
8
- [mypy-networkx.*]
9
8
  ignore_missing_imports = True
10
9
 
11
- [mypy-numpy.*]
12
10
  ignore_missing_imports = True
13
11
 
14
- [mypy-scipy.*]
15
12
  ignore_missing_imports = True
16
13
 
17
- [mypy-Cython.*]
18
14
  ignore_missing_imports = True
19
15
 
20
- [mypy-json.*]
21
16
  ignore_missing_imports = True
22
17
 
23
18
  [mypy-matplotlib.*]
@@ -22,11 +22,11 @@ include_package_data = True
22
22
  package_dir =
23
23
  =src
24
24
  install_requires =
25
- importlib-metadata; python_version<"3.9"
26
25
  networkx
27
26
  numba
28
27
  numpy
29
28
  jsonschema
29
+ ijson
30
30
 
31
31
  [options.packages.find]
32
32
  where = src
@@ -41,8 +41,6 @@ testing =
41
41
  pytest
42
42
  pytest-cov
43
43
 
44
- [options.entry_points]
45
-
46
44
  [tool:pytest]
47
45
  norecursedirs =
48
46
  dist
@@ -0,0 +1,10 @@
1
+ from importlib.metadata import PackageNotFoundError, version
2
+
3
+ try:
4
+ # Change here if project is renamed and does not equal the package name
5
+ dist_name = __name__
6
+ __version__ = version(dist_name)
7
+ except PackageNotFoundError: # pragma: no cover
8
+ __version__ = "unknown"
9
+ finally:
10
+ del version, PackageNotFoundError
@@ -25,7 +25,7 @@ edge is in the cover yet, it adds the end with the higher weight to the cover.
25
25
  It keeps track of the total weight and updates the remaining "gap" for each
26
26
  vertex. This process continues until all edges are covered.
27
27
 
28
- The second function, min_maximal_independant_set, finds a minimum weighted
28
+ The second function, min_maximal_independent_set, finds a minimum weighted
29
29
  maximal independent set in a graph. An independent set is a set of vertices
30
30
  where no two vertices are connected by an edge. "Maximal" means we can't add any
31
31
  more vertices to the set without breaking this rule. Like before, we want to
@@ -123,7 +123,7 @@ def min_vertex_cover_fast(
123
123
  coverset = set()
124
124
 
125
125
  total_dual_cost = 0 # for assertion
126
- total_prml_cost = 0
126
+ total_primal_cost = 0
127
127
  gap = copy.copy(weight)
128
128
 
129
129
  for utx, vtx in ugraph.edges():
@@ -133,22 +133,22 @@ def min_vertex_cover_fast(
133
133
  utx, vtx = vtx, utx # swap
134
134
  coverset.add(vtx)
135
135
  total_dual_cost += gap[vtx]
136
- total_prml_cost += weight[vtx]
136
+ total_primal_cost += weight[vtx]
137
137
  gap[utx] -= gap[vtx]
138
138
  gap[vtx] = 0
139
139
 
140
- assert total_dual_cost <= total_prml_cost
141
- return coverset, total_prml_cost
140
+ assert total_dual_cost <= total_primal_cost
141
+ return coverset, total_primal_cost
142
142
 
143
143
 
144
- def min_maximal_independant_set(
144
+ def min_maximal_independent_set(
145
145
  ugraph: Any,
146
146
  weight: MutableMapping,
147
147
  indset: Optional[Set] = None,
148
148
  dep: Optional[Set] = None,
149
149
  ) -> Tuple[Set, Union[int, float]]:
150
150
  r"""
151
- The `min_maximal_independant_set` function performs minimum weighted maximal
151
+ The `min_maximal_independent_set` function performs minimum weighted maximal
152
152
  independent set using primal-dual algorithm.
153
153
 
154
154
  :param ugraph: ugraph is an undirected graph represented using the NetworkX
@@ -162,22 +162,18 @@ def min_maximal_independant_set(
162
162
  :type weight: MutableMapping
163
163
 
164
164
  :param indset: The `indset` parameter is a set that represents the current
165
- independent set. It is initially set to `None` and is updated during the
166
- execution of the `min_maximal_independent_set` function
165
+ independent set.
167
166
 
168
167
  :type indset: Optional[Set]
169
168
 
170
169
  :param dep: The `dep` parameter is a set that represents the dependent vertices
171
- in the graph. These are the vertices that are not included in the
172
- independent set and are adjacent to vertices in the independent set. The
173
- `coverset` function is used to add a vertex and its adjacent vertices to
174
- the dependent set
170
+ in the graph.
175
171
 
176
172
  :type dep: Optional[Set]
177
173
 
178
- :return: The function `min_maximal_independant_set` returns a tuple containing
174
+ :return: The function `min_maximal_independent_set` returns a tuple containing
179
175
  the minimum weighted maximal independent set (indset) and the total primal
180
- cost (total_prml_cost).
176
+ cost (total_primal_cost).
181
177
 
182
178
  .. svgbob::
183
179
  :align: center
@@ -193,13 +189,13 @@ def min_maximal_independant_set(
193
189
 
194
190
  Examples:
195
191
  >>> import networkx as nx
196
- >>> from netlistx.graph_algo import min_maximal_independant_set
192
+ >>> from netlistx.graph_algo import min_maximal_independent_set
197
193
  >>> ugraph = nx.Graph()
198
194
  >>> ugraph.add_edges_from([(0, 1), (0, 2), (1, 2), (1, 3), (2, 3), (2, 4), (3, 4)])
199
195
  >>> weight = {0: 1, 1: 1, 2: 1, 3: 1, 4: 1}
200
196
  >>> indset = set()
201
197
  >>> dep = set()
202
- >>> min_maximal_independant_set(ugraph, weight, indset, dep)
198
+ >>> min_maximal_independent_set(ugraph, weight, indset, dep)
203
199
  ({0, 3}, 2)
204
200
 
205
201
  >>> ugraph = nx.Graph()
@@ -207,7 +203,7 @@ def min_maximal_independant_set(
207
203
  >>> weight = {0: 1, 1: 2, 2: 1}
208
204
  >>> indset = set()
209
205
  >>> dep = set()
210
- >>> min_maximal_independant_set(ugraph, weight, indset, dep)
206
+ >>> min_maximal_independent_set(ugraph, weight, indset, dep)
211
207
  ({0, 2}, 2)
212
208
  """
213
209
  if indset is None:
@@ -221,13 +217,12 @@ def min_maximal_independant_set(
221
217
  dep.add(vtx)
222
218
 
223
219
  gap = copy.copy(weight)
224
- total_prml_cost = 0
220
+ total_primal_cost = 0
225
221
  total_dual_cost = 0
226
222
  for utx in ugraph:
227
223
  if utx in dep:
228
224
  continue
229
- if utx in indset: # pre-define indepentant
230
- # coverset(utx)
225
+ if utx in indset: # pre-define independent
231
226
  continue
232
227
  min_val = gap[utx]
233
228
  min_vtx = utx
@@ -239,12 +234,12 @@ def min_maximal_independant_set(
239
234
  min_vtx = vtx
240
235
  indset.add(min_vtx)
241
236
  coverset(min_vtx)
242
- total_prml_cost += weight[min_vtx]
237
+ total_primal_cost += weight[min_vtx]
243
238
  total_dual_cost += min_val
244
239
  if min_vtx == utx:
245
240
  continue
246
241
  for vtx in ugraph[utx]:
247
242
  gap[vtx] -= min_val
248
243
 
249
- assert total_dual_cost <= total_prml_cost
250
- return indset, total_prml_cost
244
+ assert total_dual_cost <= total_primal_cost
245
+ return indset, total_primal_cost
@@ -5,6 +5,17 @@ This code defines a set of classes and functions for working with netlists, whic
5
5
  are representations of electronic circuits. The main purpose of this code is to
6
6
  provide tools for creating, manipulating, and analyzing netlists.
7
7
 
8
+ .. svgbob::
9
+ :align: center
10
+
11
+ Cell1 ──── NetA ──── Cell2
12
+ │ │
13
+ │ │
14
+ NetB NetC
15
+ │ │
16
+ │ │
17
+ Cell3 ──── NetD ──── Cell4
18
+
8
19
  The code doesn't take any direct inputs or produce any outputs on its own.
9
20
  Instead, it defines classes and functions that can be used by other parts of a
10
21
  program to work with netlists.
@@ -324,6 +335,10 @@ def read_yosys_json(filename: str) -> Netlist:
324
335
  """
325
336
  Read a Yosys JSON file and convert it to a Netlist object.
326
337
 
338
+ Uses ``json.load()`` to parse the entire JSON tree into memory
339
+ (DOM-style parsing). See :func:`read_yosys_json_sax` for the
340
+ streaming SAX-style alternative.
341
+
327
342
  Args:
328
343
  filename: Path to Yosys JSON file
329
344
 
@@ -436,6 +451,177 @@ def read_yosys_json(filename: str) -> Netlist:
436
451
  return netlist
437
452
 
438
453
 
454
+ def read_yosys_json_sax(filename: str) -> Netlist:
455
+ """Read a Yosys JSON netlist file using SAX-style streaming parsing.
456
+
457
+ Uses ``ijson`` to process the file as a stream of JSON events
458
+ without loading the full document tree into memory. This is
459
+ the JSON equivalent of XML's SAX parsing model — suitable for
460
+ large netlists where memory footprint matters.
461
+
462
+ The function performs a single pass over the file, collecting
463
+ cell names, port names, net IDs, and connectivity as it streams,
464
+ then assembles the final :class:`Netlist` in memory.
465
+
466
+ Args:
467
+ filename: Path to Yosys JSON netlist file.
468
+
469
+ Returns:
470
+ Netlist object representing the circuit.
471
+
472
+ Raises:
473
+ ImportError: If ``ijson`` is not installed.
474
+ FileNotFoundError: If *filename* does not exist.
475
+ """
476
+ import ijson # type: ignore[import-untyped]
477
+
478
+ # ── Phase 1: streaming collection ────────────────────────────────
479
+ cell_names: list[str] = [] # ordered list of cell names
480
+ cell_idx: dict[str, int] = {} # cell name → module ID
481
+ all_net_ids: set[int] = set() # every integer net ID seen
482
+ port_names: list[str] = [] # ordered list of port names
483
+ port_nets: dict[str, set[int]] = {} # port name → connected net IDs
484
+ cell_edges: list[tuple[int, int]] = [] # (cell_id, raw_net_id)
485
+
486
+ # SAX state variables (updated during event stream processing)
487
+ _current_cell: str | None = None
488
+ _current_port: str | None = None
489
+
490
+ # Only process the first module (matching DOM parser behaviour)
491
+ _first_module: str | None = None
492
+ _in_first_module: bool = False
493
+
494
+ with open(filename, "rb") as f:
495
+ parser = ijson.parse(f)
496
+
497
+ for prefix, event, value in parser:
498
+ # Ignore the "creator" field and other top-level keys
499
+ if _first_module is None:
500
+ if prefix == "modules" and event == "map_key":
501
+ _first_module = value # type: ignore[assignment]
502
+ _in_first_module = True
503
+ continue
504
+
505
+ # Detect when we enter / leave the first module's map
506
+ if prefix == f"modules.{_first_module}":
507
+ if event == "end_map":
508
+ break # finished the first module — stop processing
509
+ continue # start_map / map_key for module-level keys
510
+
511
+ # Skip events outside the first module
512
+ if not _in_first_module:
513
+ continue
514
+
515
+ # ── detect cell names ────────────────────────────────
516
+ if ".cells" in prefix and prefix.endswith(".cells") and event == "map_key":
517
+ _current_cell = value # type: ignore[assignment]
518
+ if _current_cell not in cell_idx:
519
+ cell_idx[_current_cell] = len(cell_names)
520
+ cell_names.append(_current_cell)
521
+
522
+ # ── detect port names ────────────────────────────────
523
+ elif ".ports" in prefix and prefix.endswith(".ports") and event == "map_key":
524
+ _current_port = value # type: ignore[assignment]
525
+ if _current_port not in port_nets:
526
+ port_nets[_current_port] = set()
527
+ port_names.append(_current_port)
528
+
529
+ # ── cell connection net IDs ──────────────────────────
530
+ elif (
531
+ ".connections." in prefix
532
+ and prefix.endswith(".item")
533
+ and event == "number"
534
+ and isinstance(value, int)
535
+ ):
536
+ if _current_cell is not None and _current_cell in cell_idx:
537
+ cell_edges.append((cell_idx[_current_cell], value))
538
+ all_net_ids.add(value)
539
+
540
+ # ── port bit net IDs ─────────────────────────────────
541
+ elif (
542
+ ".ports." in prefix
543
+ and ".bits.item" in prefix
544
+ and event == "number"
545
+ and isinstance(value, int)
546
+ ):
547
+ all_net_ids.add(value)
548
+ if _current_port is not None:
549
+ port_nets[_current_port].add(value)
550
+
551
+ # ── netnames bit net IDs ─────────────────────────────
552
+ elif (
553
+ ".netnames." in prefix
554
+ and ".bits.item" in prefix
555
+ and event == "number"
556
+ and isinstance(value, int)
557
+ ):
558
+ all_net_ids.add(value)
559
+
560
+ # ── reset state on object boundaries ─────────────────
561
+ elif ".cells." in prefix and event == "end_map" and _current_cell is not None:
562
+ parts = prefix.split(".")
563
+ if parts[-1] == _current_cell:
564
+ _current_cell = None
565
+
566
+ elif ".ports." in prefix and event == "end_map" and _current_port is not None:
567
+ parts = prefix.split(".")
568
+ if parts[-1] == _current_port:
569
+ _current_port = None
570
+
571
+ # ── Phase 2: build the graph from collected data ─────────────────
572
+ graph = nx.Graph()
573
+
574
+ # Add cell nodes
575
+ for i, name in enumerate(cell_names):
576
+ graph.add_node(i, type="module", name=name)
577
+
578
+ # Assign sorted net IDs to graph node IDs
579
+ nets_list = sorted(all_net_ids)
580
+ net_to_node: dict[int, int] = {
581
+ net_id: len(cell_names) + i for i, net_id in enumerate(nets_list)
582
+ }
583
+ for net_id in nets_list:
584
+ graph.add_node(net_to_node[net_id], type="net", net_id=net_id)
585
+
586
+ # Add cell → net edges
587
+ for cid, raw_net_id in cell_edges:
588
+ if raw_net_id in net_to_node:
589
+ graph.add_edge(cid, net_to_node[raw_net_id])
590
+
591
+ # Add port nodes and port → net edges
592
+ port_base = len(cell_names) + len(nets_list)
593
+ port_nodes: list[int] = []
594
+ for i, port_name in enumerate(port_names):
595
+ pnode = port_base + i
596
+ port_nodes.append(pnode)
597
+ graph.add_node(pnode, type="port", name=port_name)
598
+ for net_id in port_nets.get(port_name, set()):
599
+ if net_id in net_to_node:
600
+ graph.add_edge(pnode, net_to_node[net_id])
601
+
602
+ # Build module / net lists for Netlist constructor
603
+ module_nodes = list(range(len(cell_names)))
604
+ all_module_nodes = module_nodes + port_nodes
605
+ net_nodes = [net_to_node[nid] for nid in nets_list]
606
+
607
+ # Create Netlist object
608
+ netlist = Netlist(graph, all_module_nodes, net_nodes)
609
+ netlist.num_pads = len(port_names)
610
+
611
+ # Set module weights: cells = 1, ports = 0
612
+ module_weights: dict[int, int] = {}
613
+ for i in range(len(cell_names)):
614
+ module_weights[i] = 1
615
+ for pnode in port_nodes:
616
+ module_weights[pnode] = 0
617
+ netlist.module_weight = module_weights
618
+
619
+ # Mark port nodes as fixed (I/O pads)
620
+ netlist.module_fixed = set(port_nodes)
621
+
622
+ return netlist
623
+
624
+
439
625
  def create_inverter() -> Netlist:
440
626
  """
441
627
  Create a simple inverter netlist.
@@ -71,7 +71,7 @@ def min_maximal_matching(
71
71
  hyprgraph: Netlist,
72
72
  weight: MutableMapping,
73
73
  matchset: Optional[Set[Any]] = None,
74
- dependents: Optional[Set[Any]] = None,
74
+ dep: Optional[Set[Any]] = None,
75
75
  ) -> Tuple[Set[Any], Union[int, float]]:
76
76
  r"""
77
77
  The `min_maximal_matching` function performs minimum weighted maximal matching
@@ -96,11 +96,10 @@ def min_maximal_matching(
96
96
 
97
97
  :type matchset: Optional[Set]
98
98
 
99
- :param dependents: The `dependents` parameter is a set that represents the set
100
- of vertices that are covered by the current matching. It is initially set
101
- to an empty set, and is updated during the execution of the algorithm
99
+ :param dep: The `dep` parameter is a set that represents the set
100
+ of vertices that are covered (dependent) by the current matching.
102
101
 
103
- :type dependents: Optional[Set]
102
+ :type dep: Optional[Set]
104
103
 
105
104
  :return: The function `min_maximal_matching` returns a tuple containing the
106
105
  matchset (a set of matched elements) and the total primal cost (an integer
@@ -142,30 +141,17 @@ def min_maximal_matching(
142
141
  """
143
142
  if matchset is None:
144
143
  matchset = set()
145
- if dependents is None:
146
- dependents = set()
144
+ if dep is None:
145
+ dep = set()
147
146
 
148
147
  def cover(net: Any) -> None:
149
- """
150
- Mark all vertices of a net as dependents (covered).
151
-
152
- :param net: The net whose vertices should be marked as covered.
153
- """
154
148
  for vtx in hyprgraph.ugraph[net]:
155
- dependents.add(vtx)
149
+ dep.add(vtx)
156
150
 
157
151
  def any_of_dep(net: Any) -> bool:
158
- """
159
- Check if any vertex of a net is already covered.
160
-
161
- :param net: The net to check.
162
-
163
- :return: True if at least one vertex of the net is in dependents.
164
- :rtype: bool
165
- """
166
- return any(vtx in dependents for vtx in hyprgraph.ugraph[net])
152
+ return any(vtx in dep for vtx in hyprgraph.ugraph[net])
167
153
 
168
- total_prml_cost = 0
154
+ total_primal_cost = 0
169
155
  total_dual_cost = 0
170
156
 
171
157
  gap = copy.copy(weight)
@@ -173,7 +159,6 @@ def min_maximal_matching(
173
159
  if any_of_dep(net):
174
160
  continue
175
161
  if net in matchset: # pre-define matching
176
- # cover(net)
177
162
  continue
178
163
  min_val = gap[net]
179
164
  min_net = net
@@ -186,16 +171,14 @@ def min_maximal_matching(
186
171
  min_net = net2
187
172
  cover(min_net)
188
173
  matchset.add(min_net)
189
- total_prml_cost += weight[min_net]
174
+ total_primal_cost += weight[min_net]
190
175
  total_dual_cost += min_val
191
176
  if min_net == net:
192
177
  continue
193
178
  gap[net] -= min_val
194
179
  for vtx in hyprgraph.ugraph[net]:
195
180
  for net2 in hyprgraph.ugraph[vtx]:
196
- # if net2 == net:
197
- # continue
198
181
  gap[net2] -= min_val
199
182
 
200
- assert total_dual_cost <= total_prml_cost
201
- return matchset, total_prml_cost
183
+ assert total_dual_cost <= total_primal_cost
184
+ return matchset, total_primal_cost
@@ -116,10 +116,10 @@ def rand_vertex_cover_gpu(
116
116
  >>> ugraph = nx.Graph()
117
117
  >>> ugraph.add_edges_from([(0, 1), (0, 2), (1, 2)])
118
118
  >>> weight = {0: 1, 1: 1, 2: 1}
119
- >>> soln, cost = rand_vertex_cover_gpu(ugraph, weight, num_trials=64, seed=42)
120
- >>> isinstance(soln, set)
119
+ >>> soln, cost = rand_vertex_cover_gpu(ugraph, weight, num_trials=64, seed=42) # doctest: +SKIP
120
+ >>> isinstance(soln, set) # doctest: +SKIP
121
121
  True
122
- >>> all(u in soln or v in soln for u, v in ugraph.edges())
122
+ >>> all(u in soln or v in soln for u, v in ugraph.edges()) # doctest: +SKIP
123
123
  True
124
124
  """
125
125
  if not cuda.is_available():