netCDF4 1.2.3__tar.gz → 1.2.5__tar.gz

netCDF4-1.2.5/.travis.yml

@@ -0,0 +1,46 @@
+language: python
+
+sudo: false
+
+addons:
+  apt:
+    packages:
+      - libhdf5-serial-dev
+      - netcdf-bin
+      - libnetcdf-dev
+
+env:
+  global:
+    - DEPENDS="numpy cython"
+    - NO_NET=1
+
+python:
+  - "2.7"
+  - "3.3"
+  - "3.4"
+  - "3.5"
+
+matrix:
+  include:
+    # Absolute minimum dependencies.
+    - python: 2.6
+      env:
+        - DEPENDS="numpy==1.7.0 cython==0.19 ordereddict==1.1"
+    # Test without Cython installed.
+    - python: 2.6
+      env:
+        - DEPENDS="numpy ordereddict"
+
+notifications:
+  email: false
+
+before_install:
+  - pip install $DEPENDS
+
+install:
+  - python setup.py build
+  - python setup.py install
+
+script:
+  - cd test
+  - python run_all.py

{netCDF4-1.2.3.1 → netCDF4-1.2.5}/Changelog

@@ -1,3 +1,46 @@
+ version 1.2.5 (tag v1.2.5rel)
+==============================
+ * Add MFDataset.set_auto_maskandscale (plus set_auto_scale, set_auto_mask).
+   Fixes issue #570.
+ * Use valid_min/valid_max/valid_range attributes when defining mask
+   (issue #576).  Values outside the valid range are considered to
+   be missing when defining the mask.
+ * Fix for issue #584 (add support for dates before -4712-1-1 in 360_day
+   and 365_day calendars to netcdftime.utime).
+ * Fix for issue #593: add support for datetime.timedelta operations
+   (adding and subtracting timedelta, subtracting two datetime
+   instances to compute time duration between them), implement
+   datetime.replace() and datetime.__str__(). datetime.__repr__()
+   includes the full state of an instance. Add datetime.calendar.
+   datetime comparison operators have full accuracy now.
+ * Fix for issue #585 by increasing the size of the buffer used to store the
+   filepath.
+ * Fix for issue #592: Add support for string array attributes. (When
+   reading, a vlen string array attribute is returned as a list of
+   strings. To write, use var.setncattr_string("name", ["two", "strings"]).)
+ * Fix for issue #596 - julian day calculations wrong for negative years,
+   caused incorrect rountrip num2date(date2num(date)) roundtrip for dates with year
+   < 0.
+ * Make sure negative years work in utime.num2date (issue #596).
+ * raise NotImplementedError when trying to pickle Dataset, Variable,
+   CompoundType, VLType, EnumType and MFDataset (issue #602).
+ * Fix for issue #527: initialize vldata[i].p in Variable._get(...).
+
+ version 1.2.4 (tag v1.2.4rel)
+==============================
+ * Fix for issue #554.  It is now ensured that data is in native endian
+   byte order before passing to netcdf-c library.  Data read from variable
+   with non-native byte order is also byte-swapped, so that dtype remains
+   consistent with netcdf variable.  Behavior now consistent with h5py.
+ * raise warning for HDF5 1.10.x (issue #549), since backwards 
+   incompatible files may be created.
+ * raise AttributeError instead of RuntimeError when attribute operation
+   fails.  raise IOError instead of RuntimeError when nc_create or 
+   nc_open fails (issue #546).
+ * Use NamedTemporaryFile instead of deprecated mktemp in tests
+   (pull request #543). 
+ * add AppVeyor automated windows tests (pull request #540).
+
  version 1.2.3.1 (tag v1.2.3.1rel)
 ==================================
  * fix bug in setup.py (pull request #539, introduced in issue #518).

{netCDF4-1.2.3.1 → netCDF4-1.2.5}/MANIFEST.in

@@ -1,10 +1,13 @@
 recursive-include docs *
 recursive-include man *
 recursive-include include *
+recursive-include conda.recipe
 include MANIFEST.in
 include README.md
 include COPYING
 include Changelog
+include appveyor.yml
+include .travis.yml
 include setup.cfg
 include setup.cfg.template
 include examples/*py
@@ -16,9 +19,8 @@ include utils/nc3tonc4
 include utils/nc4tonc3
 include utils/ncinfo
 include netcdftime/__init__.py
-include netcdftime/_datetime.pyx
-include netcdftime/netcdftime.py
-include netcdftime/_datetime.c
+include netcdftime/_netcdftime.pyx
+include netcdftime/_netcdftime.c
 include netCDF4/__init__.py
 include netCDF4/_netCDF4.pyx
 include netCDF4/utils.py

{netCDF4-1.2.3.1/netCDF4.egg-info → netCDF4-1.2.5}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 1.1
 Name: netCDF4
-Version: 1.2.3.1
+Version: 1.2.5
 Summary: Provides an object-oriented python interface to the netCDF version 4 library.
 Home-page: http://github.com/Unidata/netcdf4-python
 Author: Jeff Whitaker
@@ -13,6 +13,13 @@ Description: netCDF version 4 has many features not found in earlier versions of
 Keywords: numpy,netcdf,data,science,network,oceanography,meteorology,climate
 Platform: any
 Classifier: Development Status :: 3 - Alpha
+Classifier: Programming Language :: Python :: 2
+Classifier: Programming Language :: Python :: 2.6
+Classifier: Programming Language :: Python :: 2.7
+Classifier: Programming Language :: Python :: 3
+Classifier: Programming Language :: Python :: 3.3
+Classifier: Programming Language :: Python :: 3.4
+Classifier: Programming Language :: Python :: 3.5
 Classifier: Intended Audience :: Science/Research
 Classifier: License :: OSI Approved
 Classifier: Topic :: Software Development :: Libraries :: Python Modules

{netCDF4-1.2.3.1 → netCDF4-1.2.5}/README.md

@@ -1,12 +1,22 @@
 # netcdf4-python
 [Python](http://python.org)/[numpy](http://numpy.org) interface to the netCDF [C library](https://github.com/Unidata/netcdf-c).
 
-[![Build Status](https://travis-ci.org/Unidata/netcdf4-python.svg?branch=master)](https://travis-ci.org/Unidata/netcdf4-python)
+[![Linux Build Status](https://travis-ci.org/Unidata/netcdf4-python.svg?branch=master)](https://travis-ci.org/Unidata/netcdf4-python)
+[![Windows Build Status](https://ci.appveyor.com/api/projects/status/fl9taa9je4e6wi7n/branch/master?svg=true)](https://ci.appveyor.com/project/jswhit/netcdf4-python/branch/master)
 [![PyPI package](https://badge.fury.io/py/netCDF4.svg)](http://python.org/pypi/netCDF4)
 
 ## News
 For the latest updates, see the [Changelog](https://github.com/Unidata/netcdf4-python/blob/master/Changelog).
 
+12/1/2016: Version [1.2.5](https://github.com/Unidata/netcdf4-python/releases/tag/v1.2.5rel) released.
+See the [Changelog](https://github.com/Unidata/netcdf4-python/blob/master/Changelog) for changes.
+
+4/15/2016: Version [1.2.4](https://pypi.python.org/pypi/netCDF4/1.2.4) released. 
+Bugs in handling of variables with specified non-native "endian-ness" (byte-order) fixed ([issue #554]
+(https://github.com/Unidata/netcdf4-python/issues/554)).  Build instructions updated and warning issued
+to deal with potential backwards incompatibility introduced when using HDF5 1.10.x
+(see [Unidata/netcdf-c/issue#250](https://github.com/Unidata/netcdf-c/issues/250)).
+
 3/10/2016: Version [1.2.3](https://pypi.python.org/pypi/netCDF4/1.2.3) released. Various bug fixes.
 All text attributes in ``NETCDF4`` formatted files are now written as type ``NC_CHAR``, unless they contain unicode characters that
 cannot be encoded in ascii, in which case they are written as ``NC_STRING``.  Previously,

netCDF4-1.2.5/appveyor.yml

@@ -0,0 +1,73 @@
+environment:
+
+  CONDA_INSTALL_LOCN: "C:\\conda"
+
+  # SDK v7.0 MSVC Express 2008's SetEnv.cmd script will fail if the
+  # /E:ON and /V:ON options are not enabled in the batch script interpreter
+  # See: http://stackoverflow.com/a/13751649/163740
+  CMD_IN_ENV: "cmd /E:ON /V:ON /C obvci_appveyor_python_build_env.cmd"
+
+  # Workaround for https://github.com/conda/conda-build/issues/636
+  PYTHONIOENCODING: "UTF-8"
+  PYTHONUNBUFFERED: "1"
+
+  # We set a default Python version for the miniconda that is to be installed.
+  # This can be overridden in the matrix definition where appropriate.
+  CONDA_PY: "27"
+
+  matrix:
+    - TARGET_ARCH: x86
+      CONDA_NPY: 111
+      CONDA_PY: 27
+
+    - TARGET_ARCH: x64
+      CONDA_NPY: 111
+      CONDA_PY: 27
+
+    - TARGET_ARCH: x86
+      CONDA_NPY: 111
+      CONDA_PY: 35
+
+    - TARGET_ARCH: x64
+      CONDA_NPY: 111
+      CONDA_PY: 35
+
+platform:
+    - x64
+
+install:
+    # If there is a newer build queued for the same PR, cancel this one.
+    # The AppVeyor 'rollout builds' option is supposed to serve the same
+    # purpose but it is problematic because it tends to cancel builds pushed
+    # directly to master instead of just PR builds (or the converse).
+    # credits: JuliaLang developers.
+    - ps: if ($env:APPVEYOR_PULL_REQUEST_NUMBER -and $env:APPVEYOR_BUILD_NUMBER -ne ((Invoke-RestMethod `
+         https://ci.appveyor.com/api/projects/$env:APPVEYOR_ACCOUNT_NAME/$env:APPVEYOR_PROJECT_SLUG/history?recordsNumber=50).builds | `
+         Where-Object pullRequestId -eq $env:APPVEYOR_PULL_REQUEST_NUMBER)[0].buildNumber) { `
+           throw "There are newer queued builds for this pull request, failing early." }
+
+    # Set the CONDA_NPY, although it has no impact on the actual build.
+    # We need this because of a test within conda-build.
+    - cmd: set CONDA_NPY=19
+
+    # Use the pre-installed Miniconda for the desired arch.
+    - ps: if($env:TARGET_ARCH -eq 'x86')
+            {$root = "C:\Miniconda"}
+          else
+            {$root = "C:\Miniconda-x64"}
+          $env:path="$root;$root\Scripts;$root\Library\bin;$($env:path)"
+
+    # Update conda.
+    - cmd: conda update --yes --quiet conda
+
+    # Conda build tools.
+    - cmd: conda config --add channels conda-forge --force
+    - cmd: conda install --yes --quiet obvious-ci
+    - cmd: obvci_install_conda_build_tools.py
+    - cmd: conda info
+
+# Skip .NET project specific build phase.
+build: off
+
+test_script:
+    - "%CMD_IN_ENV% conda build conda.recipe --quiet"