nested-fit 6.0.0.dev137__tar.gz → 6.0.0.dev138__tar.gz

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  1. {nested_fit-6.0.0.dev137/nested_fit.egg-info → nested_fit-6.0.0.dev138}/PKG-INFO +17 -1
  2. nested_fit-6.0.0.dev137/PKG-INFO → nested_fit-6.0.0.dev138/README.md +16 -27
  3. nested_fit-6.0.0.dev137/README.md → nested_fit-6.0.0.dev138/nested_fit.egg-info/PKG-INFO +43 -0
  4. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/pyproject.toml +2 -2
  5. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/.github/dependabot.yml +0 -0
  6. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/.github/workflows/build_wheels.yml +0 -0
  7. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/.gitignore +0 -0
  8. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/CMakeLists.txt +0 -0
  9. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/LICENSE +0 -0
  10. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/STEPBYSTEP_INSTALL.md +0 -0
  11. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/ThirdParty.md +0 -0
  12. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/benchmarks_and_tests.ipynb +0 -0
  13. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/benefit_per_step.py +0 -0
  14. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/gpu_performance_model.ipynb +0 -0
  15. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/levers_matrix.py +0 -0
  16. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/levers_matrix_a4000_2026-10-30.md +0 -0
  17. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/levers_matrix_table.py +0 -0
  18. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/sweep.py +0 -0
  19. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/test_01_gauss_bg/he-histo.dat +0 -0
  20. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/test_01_gauss_bg/nf_input.yaml +0 -0
  21. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/test_03_4gauss_bg/he-histo.dat +0 -0
  22. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/test_03_4gauss_bg/nf_input.yaml +0 -0
  23. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/test_11_LJ17/nf_input.yaml +0 -0
  24. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/test_12_gpu_crosscheck/README.txt +0 -0
  25. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/test_12_gpu_crosscheck/nf_input.yaml +0 -0
  26. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/test_12_gpu_crosscheck/out_points.csv +0 -0
  27. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/benchmarks_and_tests/variations_gain.ipynb +0 -0
  28. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/cmake/resman.cmake +0 -0
  29. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/cmake/write_manifest.cmake +0 -0
  30. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/README.md +0 -0
  31. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/RANDOM_WALK/he-histo.dat +0 -0
  32. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/RANDOM_WALK/nf_input.yaml +0 -0
  33. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/RANDOM_WALK_NO_DB/he-histo.dat +0 -0
  34. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/RANDOM_WALK_NO_DB/nf_input.yaml +0 -0
  35. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/RANDOM_WALK_SYN/he-histo.dat +0 -0
  36. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/RANDOM_WALK_SYN/nf_input.yaml +0 -0
  37. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/README.txt +0 -0
  38. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/internal_func_hard_writing/he-histo.dat +0 -0
  39. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/internal_func_hard_writing/nf_input.yaml +0 -0
  40. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/internal_func_input/he-histo.dat +0 -0
  41. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/internal_func_input/nf_input.yaml +0 -0
  42. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/internal_func_no_points_file/he-histo.dat +0 -0
  43. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/internal_func_no_points_file/nf_input.yaml +0 -0
  44. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/internal_func_no_stat/he-histo.dat +0 -0
  45. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/internal_func_no_stat/nf_input.yaml +0 -0
  46. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/latex_func_input/he-histo.dat +0 -0
  47. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/latex_func_input/nf_input.yaml +0 -0
  48. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/legacy_func_input/he-histo.dat +0 -0
  49. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/01_simple_example/legacy_func_input/nf_input.yaml +0 -0
  50. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/02_error_bars_data/README.txt +0 -0
  51. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/02_error_bars_data/eb_gauss_bg-x0_300-sigma_20-A_20000-p_to_bg_0.05-bin_1.dat +0 -0
  52. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/02_error_bars_data/nf_input.yaml +0 -0
  53. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/DBSCAN-RANDOM_WALK_SYN/he-histo.dat +0 -0
  54. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/DBSCAN-RANDOM_WALK_SYN/nf_input.yaml +0 -0
  55. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/DBSCAN-SLICE_SAMPLING/he-histo.dat +0 -0
  56. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/DBSCAN-SLICE_SAMPLING/nf_input.yaml +0 -0
  57. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/KNN-RANDOM_WALK_SYN/he-histo.dat +0 -0
  58. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/KNN-RANDOM_WALK_SYN/nf_input.yaml +0 -0
  59. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/KNN-SLICE_SAMPLING/he-histo.dat +0 -0
  60. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/KNN-SLICE_SAMPLING/nf_input.yaml +0 -0
  61. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/README.txt +0 -0
  62. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/agglomerative-RANDOM_WALK_SYN/he-histo.dat +0 -0
  63. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/agglomerative-RANDOM_WALK_SYN/nf_input.yaml +0 -0
  64. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/agglomerative-SLICE_SAMPLING/he-histo.dat +0 -0
  65. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/agglomerative-SLICE_SAMPLING/nf_input.yaml +0 -0
  66. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/mean-shift-RANDOM_WALK_SYN/he-histo.dat +0 -0
  67. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/mean-shift-RANDOM_WALK_SYN/nf_input.yaml +0 -0
  68. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/mean-shift-SLICE_SAMPLING/he-histo.dat +0 -0
  69. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/03_with_cluster_analysis/mean-shift-SLICE_SAMPLING/nf_input.yaml +0 -0
  70. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/04_set_of_datafiles/latex_func_input/gauss_bg-x0_300-sigma_20-A_300-p_to_bg_20-bin_1.dat +0 -0
  71. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/04_set_of_datafiles/latex_func_input/gauss_bg-x0_310-sigma_20-A_150-p_to_bg_10-bin_1.dat +0 -0
  72. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/04_set_of_datafiles/latex_func_input/nf_input.yaml +0 -0
  73. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/04_set_of_datafiles/legacy_func_input/gauss_bg-x0_300-sigma_20-A_300-p_to_bg_20-bin_1.dat +0 -0
  74. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/04_set_of_datafiles/legacy_func_input/gauss_bg-x0_310-sigma_20-A_150-p_to_bg_10-bin_1.dat +0 -0
  75. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/04_set_of_datafiles/legacy_func_input/nf_input.yaml +0 -0
  76. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/05_data_2D/README.txt +0 -0
  77. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/05_data_2D/nf_input.yaml +0 -0
  78. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/05_data_2D/test_matrix.dat +0 -0
  79. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/06_interpolation_function/ginterp.csv +0 -0
  80. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/06_interpolation_function/interp.csv +0 -0
  81. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/06_interpolation_function/nf_input.yaml +0 -0
  82. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/data_analysis/06_interpolation_function/pynf_interp.ipynb +0 -0
  83. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/function_integration/07_func_GAUSS/hard_writing/nf_input.yaml +0 -0
  84. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/function_integration/07_func_GAUSS/no_hard_writing/nf_input.yaml +0 -0
  85. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/function_integration/08_func_EGGBOX/nf_input.yaml +0 -0
  86. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/.ipynb_checkpoints/pandas_extended_analysis-checkpoint.ipynb +0 -0
  87. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/.ipynb_checkpoints/simple_analysis_visu-checkpoint.ipynb +0 -0
  88. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/LJ17/nf_input.yaml +0 -0
  89. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/LJ3/nf_input.yaml +0 -0
  90. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/LJ7/nf_input.yaml +0 -0
  91. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/LJ7_norm/nf_input.yaml +0 -0
  92. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/exploring_potentials.ipynb +0 -0
  93. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/pandas_extended_analysis.ipynb +0 -0
  94. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/pynf_interp.ipynb +0 -0
  95. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/quick_start_with_google_colab.ipynb +0 -0
  96. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/res_1gauss_bg/he-histo.dat +0 -0
  97. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/res_1gauss_bg/nf_input.yaml +0 -0
  98. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/res_2gauss_bg/he-histo.dat +0 -0
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  100. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/res_3gauss_bg/.ipynb_checkpoints/he-histo-checkpoint.dat +0 -0
  101. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/res_3gauss_bg/.ipynb_checkpoints/nf_input-checkpoint.dat +0 -0
  102. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/res_3gauss_bg/.ipynb_checkpoints/nf_input-checkpoint.yaml +0 -0
  103. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/res_3gauss_bg/he-histo.dat +0 -0
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  105. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/res_4gauss_bg/he-histo.dat +0 -0
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  107. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/examples/jupyter_notebooks/set_of_datafiles/README.txt +0 -0
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  127. {nested_fit-6.0.0.dev137 → nested_fit-6.0.0.dev138}/exercises/exercises_QXRA/with_U_1000_counts/c_U_1000_counts.dat +0 -0
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@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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2
  Name: nested_fit
3
- Version: 6.0.0.dev137
3
+ Version: 6.0.0.dev138
4
4
  Summary: The nested_fit package.
5
5
  Author: Martino Trassinelli, Lune Maillard, César Godinho
6
6
  Project-URL: Homepage, https://github.com/martinit18/nested_fit
@@ -87,6 +87,22 @@ needs; the driver is the only other requirement, no CUDA toolkit. The likelihood
87
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  the GPU, on at most 8 threads, whenever a startup self-test finds that faster than all the CPU
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  threads together, and on the CPU otherwise, with one log line saying which. Details and controls in `src/gpu/README.md`.
89
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+ ### What must be installed on the machine
91
+
92
+ nested_fit compiles your model at run time, so two compilers are needed on every machine it runs
93
+ on, with the pip wheel as much as with a source build; without them a run stops before sampling.
94
+
95
+ | system | compilers | GPU (optional) |
96
+ |---|---|---|
97
+ | Ubuntu, Debian | `sudo apt install gfortran g++` | NVIDIA driver, then `pip install "nested_fit[cuda]"` |
98
+ | Fedora, RHEL, Rocky | `sudo dnf install gcc-gfortran gcc-c++` | same |
99
+ | macOS | `brew install gcc` (gfortran) and `xcode-select --install` (clang++) | no GPU support on macOS |
100
+ | conda environments | `conda install -c conda-forge gfortran cxx-compiler` | as above |
101
+
102
+ The Linux wheel needs glibc 2.28 or newer (Ubuntu 20.04, Debian 10, RHEL 8 and later); older
103
+ systems build from source, see below. On an AMD GPU the ROCm runtime with hipRTC plays the role of
104
+ the driver and the `[cuda]` extra; that path is written and has not been run yet.
105
+
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  The `examples/` directory is bundled with the package. After installation you can
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  copy it to a local working area in a couple of ways:
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@@ -1,30 +1,3 @@
1
- Metadata-Version: 2.4
2
- Name: nested_fit
3
- Version: 6.0.0.dev137
4
- Summary: The nested_fit package.
5
- Author: Martino Trassinelli, Lune Maillard, César Godinho
6
- Project-URL: Homepage, https://github.com/martinit18/nested_fit
7
- Project-URL: Bug Tracker, https://github.com/martinit18/nested_fit/issues
8
- Classifier: Programming Language :: Fortran
9
- Classifier: Programming Language :: C++
10
- Classifier: Programming Language :: Python :: 3
11
- Classifier: Operating System :: OS Independent
12
- Description-Content-Type: text/markdown
13
- License-File: LICENSE
14
- Requires-Dist: pandas
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- Requires-Dist: numpy
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- Requires-Dist: matplotlib
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- Requires-Dist: scipy
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- Requires-Dist: getdist
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- Requires-Dist: rich
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- Requires-Dist: plotly
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- Requires-Dist: psutil
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- Requires-Dist: anesthetic
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- Requires-Dist: plotext
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- Provides-Extra: cuda
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- Requires-Dist: nvidia-cuda-nvrtc-cu12; extra == "cuda"
26
- Dynamic: license-file
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-
28
1
  # NESTED FIT
29
2
 
30
3
  Nested_fit is a data analysis program based on the Bayesian statistics for the computation of, for a given set of data and chosen model, the complete probability distribution for each parameter and the Bayesian evidence.
@@ -87,6 +60,22 @@ needs; the driver is the only other requirement, no CUDA toolkit. The likelihood
87
60
  the GPU, on at most 8 threads, whenever a startup self-test finds that faster than all the CPU
88
61
  threads together, and on the CPU otherwise, with one log line saying which. Details and controls in `src/gpu/README.md`.
89
62
 
63
+ ### What must be installed on the machine
64
+
65
+ nested_fit compiles your model at run time, so two compilers are needed on every machine it runs
66
+ on, with the pip wheel as much as with a source build; without them a run stops before sampling.
67
+
68
+ | system | compilers | GPU (optional) |
69
+ |---|---|---|
70
+ | Ubuntu, Debian | `sudo apt install gfortran g++` | NVIDIA driver, then `pip install "nested_fit[cuda]"` |
71
+ | Fedora, RHEL, Rocky | `sudo dnf install gcc-gfortran gcc-c++` | same |
72
+ | macOS | `brew install gcc` (gfortran) and `xcode-select --install` (clang++) | no GPU support on macOS |
73
+ | conda environments | `conda install -c conda-forge gfortran cxx-compiler` | as above |
74
+
75
+ The Linux wheel needs glibc 2.28 or newer (Ubuntu 20.04, Debian 10, RHEL 8 and later); older
76
+ systems build from source, see below. On an AMD GPU the ROCm runtime with hipRTC plays the role of
77
+ the driver and the `[cuda]` extra; that path is written and has not been run yet.
78
+
90
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  The `examples/` directory is bundled with the package. After installation you can
91
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  copy it to a local working area in a couple of ways:
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81
 
@@ -1,3 +1,30 @@
1
+ Metadata-Version: 2.4
2
+ Name: nested_fit
3
+ Version: 6.0.0.dev138
4
+ Summary: The nested_fit package.
5
+ Author: Martino Trassinelli, Lune Maillard, César Godinho
6
+ Project-URL: Homepage, https://github.com/martinit18/nested_fit
7
+ Project-URL: Bug Tracker, https://github.com/martinit18/nested_fit/issues
8
+ Classifier: Programming Language :: Fortran
9
+ Classifier: Programming Language :: C++
10
+ Classifier: Programming Language :: Python :: 3
11
+ Classifier: Operating System :: OS Independent
12
+ Description-Content-Type: text/markdown
13
+ License-File: LICENSE
14
+ Requires-Dist: pandas
15
+ Requires-Dist: numpy
16
+ Requires-Dist: matplotlib
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+ Requires-Dist: scipy
18
+ Requires-Dist: getdist
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+ Requires-Dist: rich
20
+ Requires-Dist: plotly
21
+ Requires-Dist: psutil
22
+ Requires-Dist: anesthetic
23
+ Requires-Dist: plotext
24
+ Provides-Extra: cuda
25
+ Requires-Dist: nvidia-cuda-nvrtc-cu12; extra == "cuda"
26
+ Dynamic: license-file
27
+
1
28
  # NESTED FIT
2
29
 
3
30
  Nested_fit is a data analysis program based on the Bayesian statistics for the computation of, for a given set of data and chosen model, the complete probability distribution for each parameter and the Bayesian evidence.
@@ -60,6 +87,22 @@ needs; the driver is the only other requirement, no CUDA toolkit. The likelihood
60
87
  the GPU, on at most 8 threads, whenever a startup self-test finds that faster than all the CPU
61
88
  threads together, and on the CPU otherwise, with one log line saying which. Details and controls in `src/gpu/README.md`.
62
89
 
90
+ ### What must be installed on the machine
91
+
92
+ nested_fit compiles your model at run time, so two compilers are needed on every machine it runs
93
+ on, with the pip wheel as much as with a source build; without them a run stops before sampling.
94
+
95
+ | system | compilers | GPU (optional) |
96
+ |---|---|---|
97
+ | Ubuntu, Debian | `sudo apt install gfortran g++` | NVIDIA driver, then `pip install "nested_fit[cuda]"` |
98
+ | Fedora, RHEL, Rocky | `sudo dnf install gcc-gfortran gcc-c++` | same |
99
+ | macOS | `brew install gcc` (gfortran) and `xcode-select --install` (clang++) | no GPU support on macOS |
100
+ | conda environments | `conda install -c conda-forge gfortran cxx-compiler` | as above |
101
+
102
+ The Linux wheel needs glibc 2.28 or newer (Ubuntu 20.04, Debian 10, RHEL 8 and later); older
103
+ systems build from source, see below. On an AMD GPU the ROCm runtime with hipRTC plays the role of
104
+ the driver and the `[cuda]` extra; that path is written and has not been run yet.
105
+
63
106
  The `examples/` directory is bundled with the package. After installation you can
64
107
  copy it to a local working area in a couple of ways:
65
108
 
@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
4
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  [project]
6
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  name = "nested_fit"
7
- version = "6.0.0.dev137"
7
+ version = "6.0.0.dev138"
8
8
  description = "The nested_fit package."
9
9
  readme = "README.md"
10
10
 
@@ -74,7 +74,7 @@ environment = "CFLAGS='-static-libgcc -static-libstdc++' CXXFLAGS='-static-libgc
74
74
  repair-wheel-command = "auditwheel repair --exclude libgomp.so.1 -w {dest_dir} {wheel}"
75
75
 
76
76
  [tool.setuptools_scm]
77
- fallback_version = "6.0.0.dev137"
77
+ fallback_version = "6.0.0.dev138"
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78
 
79
79
  [options]
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80
  python_requires = ">=3.8"