nci-cidc-api-modules 1.2.25__tar.gz → 1.2.27__tar.gz

{nci_cidc_api_modules-1.2.25/nci_cidc_api_modules.egg-info → nci_cidc_api_modules-1.2.27}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: nci_cidc_api_modules
-Version: 1.2.25
+Version: 1.2.27
 Summary: SQLAlchemy data models and configuration tools used in the NCI CIDC API
 Home-page: https://github.com/NCI-CIDC/cidc-api-gae
 License: MIT license
@@ -25,6 +25,7 @@ Requires-Dist: numpy>=2.3.4
 Requires-Dist: packaging>=25.0
 Requires-Dist: pandas>=2.3.3
 Requires-Dist: pyarrow>=22.0.0
+Requires-Dist: pydantic~=2.11.7
 Requires-Dist: python-dotenv>=1.2.1
 Requires-Dist: requests>=2.32.5
 Requires-Dist: sqlalchemy>=2.0.44

nci_cidc_api_modules-1.2.27/cidc_api/reference/ctcae.py

@@ -0,0 +1,34 @@
+# Stubbed to accept any string
+def is_ctcae_event_term(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v
+
+
+# Stubbed to accept any string
+def is_ctcae_event_code(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v
+
+
+# Stubbed to accept any string
+def is_ctcae_severity_grade(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v
+
+
+# Stubbed to accept any string
+def is_ctcae_system_organ_class(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v
+
+
+# Determines if the CTCAE term is one of the "Other, specify" types of terms for which we include
+# additional data about the AE.
+def is_ctcae_other_term(v):
+    if isinstance(v, str):
+        return "Other, specify" in v
+    return False

nci_cidc_api_modules-1.2.27/cidc_api/reference/gvhd.py

@@ -0,0 +1,6 @@
+# Stubbed to accept any string
+# Should support MAGIC and Modified Glucksberg
+def is_gvhd_organ(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v

nci_cidc_api_modules-1.2.27/cidc_api/reference/icd10cm.py

@@ -0,0 +1,12 @@
+# Stubbed to accept any string
+def is_ICD10CM_code(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v
+
+
+# Stubbed to accept any string
+def is_ICD10CM_term(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v

nci_cidc_api_modules-1.2.27/cidc_api/reference/icdo3.py

@@ -0,0 +1,12 @@
+# Stubbed to accept any string
+def is_ICDO3_code(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v
+
+
+# Stubbed to accept any string
+def is_ICDO3_term(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v

nci_cidc_api_modules-1.2.27/cidc_api/reference/uberon.py

@@ -0,0 +1,5 @@
+# Stubbed to accept any string
+def is_uberon_term(v):
+    if not isinstance(v, str):
+        raise TypeError("Value must be a string")
+    return v

{nci_cidc_api_modules-1.2.25 → nci_cidc_api_modules-1.2.27/nci_cidc_api_modules.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: nci_cidc_api_modules
-Version: 1.2.25
+Version: 1.2.27
 Summary: SQLAlchemy data models and configuration tools used in the NCI CIDC API
 Home-page: https://github.com/NCI-CIDC/cidc-api-gae
 License: MIT license
@@ -25,6 +25,7 @@ Requires-Dist: numpy>=2.3.4
 Requires-Dist: packaging>=25.0
 Requires-Dist: pandas>=2.3.3
 Requires-Dist: pyarrow>=22.0.0
+Requires-Dist: pydantic~=2.11.7
 Requires-Dist: python-dotenv>=1.2.1
 Requires-Dist: requests>=2.32.5
 Requires-Dist: sqlalchemy>=2.0.44

{nci_cidc_api_modules-1.2.25 → nci_cidc_api_modules-1.2.27}/nci_cidc_api_modules.egg-info/SOURCES.txt

@@ -94,6 +94,11 @@ cidc_api/models/pydantic/stage2/surgery.py
 cidc_api/models/pydantic/stage2/therapy_agent_dose.py
 cidc_api/models/pydantic/stage2/treatment.py
 cidc_api/models/pydantic/stage2/trial.py
+cidc_api/reference/ctcae.py
+cidc_api/reference/gvhd.py
+cidc_api/reference/icd10cm.py
+cidc_api/reference/icdo3.py
+cidc_api/reference/uberon.py
 cidc_api/shared/__init__.py
 cidc_api/shared/auth.py
 cidc_api/shared/email_layout.html

{nci_cidc_api_modules-1.2.25 → nci_cidc_api_modules-1.2.27}/nci_cidc_api_modules.egg-info/requires.txt

@@ -16,6 +16,7 @@ numpy>=2.3.4
 packaging>=25.0
 pandas>=2.3.3
 pyarrow>=22.0.0
+pydantic~=2.11.7
 python-dotenv>=1.2.1
 requests>=2.32.5
 sqlalchemy>=2.0.44

{nci_cidc_api_modules-1.2.25 → nci_cidc_api_modules-1.2.27}/requirements.modules.txt

@@ -16,6 +16,7 @@ numpy>=2.3.4
 packaging>=25.0
 pandas>=2.3.3
 pyarrow>=22.0.0
+pydantic~=2.11.7
 python-dotenv>=1.2.1
 requests>=2.32.5
 sqlalchemy>=2.0.44

{nci_cidc_api_modules-1.2.25 → nci_cidc_api_modules-1.2.27}/setup.py

@@ -14,6 +14,7 @@ packages = [
     "cidc_api.config",
     "cidc_api.models",
     "cidc_api.shared",
+    "cidc_api.reference",
 ]
 packages += find_namespace_packages(include=["cidc_api.models.*"])
 print(packages)