PyPI - nci-cidc-api-modules - Versions diffs - 1.2.12__tar.gz → 1.2.14__tar.gz - Mend

nci-cidc-api-modules 1.2.12tar.gz → 1.2.14tar.gz

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nci_cidc_api_modules-1.2.14/MANIFEST.in ADDED Viewed

	@@ -0,0 +1,2 @@
1	+ include requirements.modules.txt
2	+ include cidc_api/shared/email_layout.html

{nci_cidc_api_modules-1.2.12/nci_cidc_api_modules.egg-info → nci_cidc_api_modules-1.2.14}/PKG-INFO RENAMED Viewed

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: nci_cidc_api_modules
-Version: 1.2.12
+Version: 1.2.14
 Summary: SQLAlchemy data models and configuration tools used in the NCI CIDC API
 Home-page: https://github.com/NCI-CIDC/cidc-api-gae
 License: MIT license

{nci_cidc_api_modules-1.2.12 → nci_cidc_api_modules-1.2.14}/cidc_api/config/settings.py RENAMED Viewed

@@ -108,5 +108,9 @@ else:
     IS_EMAIL_ON = environ.get("IS_EMAIL_ON")
+# notification emails
+CIDC_CLINICAL_DATA_EMAIL = environ.get("CIDC_CLINICAL_DATA_EMAIL")
+CIDC_ADMIN_EMAIL = environ.get("CIDC_ADMIN_EMAIL")
 # Accumulate all constants defined in this file in a single dictionary
 SETTINGS = {k: v for k, v in globals().items() if k.isupper()}

nci_cidc_api_modules-1.2.14/cidc_api/shared/email_layout.html ADDED Viewed

@@ -0,0 +1,258 @@
+<!DOCTYPE html>
+<html>
+<head>
+  <title>Manifest Status Notification</title>
+  <meta charset="utf-8">
+  <meta name="viewport" content="width=device-width, initial-scale=1">
+  <meta http-equiv="Content-Type" content="text/html charset=UTF-8" />
+  <meta http-equiv="X-UA-Compatible" content="IE=edge" />
+  <style type="text/css">
+    /* CLIENT-SPECIFIC STYLES */
+    body,
+    table,
+    td,
+    a {
+      -webkit-text-size-adjust: 100%;
+      -ms-text-size-adjust: 100%;
+    }
+    /* Prevent WebKit and Windows mobile changing default text sizes */
+    table,
+    td {
+      mso-table-lspace: 0pt;
+      mso-table-rspace: 0pt;
+    }
+    /* Remove spacing between tables in Outlook 2007 and up */
+    img {
+      -ms-interpolation-mode: bicubic;
+    }
+    /* Allow smoother rendering of resized image in Internet Explorer */
+    /* RESET STYLES */
+    img {
+      border: 0;
+      height: auto;
+      line-height: 100%;
+      outline: none;
+      text-decoration: none;
+    }
+    table {
+      border-collapse: collapse !important;
+    }
+    body {
+      height: 100% !important;
+      margin: 0 !important;
+      padding: 0 !important;
+      width: 100% !important;
+    }
+    /* iOS BLUE LINKS */
+    a[x-apple-data-detectors] {
+      color: inherit !important;
+      text-decoration: none !important;
+      font-size: inherit !important;
+      font-family: inherit !important;
+      font-weight: inherit !important;
+      line-height: inherit !important;
+    }
+    /* MOBILE STYLES */
+    @media screen and (max-width: 525px) {
+      /* ALLOWS FOR FLUID TABLES */
+      .wrapper {
+        width: 100% !important;
+        max-width: 100% !important;
+      }
+      /* ADJUSTS LAYOUT OF LOGO IMAGE */
+      .logo img {
+        margin: 0 auto !important;
+      }
+      /* USE THESE CLASSES TO HIDE CONTENT ON MOBILE */
+      .mobile-hide {
+        display: none !important;
+      }
+      .img-max {
+        max-width: 100% !important;
+        width: 100% !important;
+        height: auto !important;
+      }
+      /* FULL-WIDTH TABLES */
+      .responsive-table {
+        width: 100% !important;
+      }
+      /* UTILITY CLASSES FOR ADJUSTING PADDING ON MOBILE */
+      .padding {
+        padding: 10px 5% 15px 5% !important;
+      }
+      .padding-meta {
+        padding: 30px 5% 0px 5% !important;
+        text-align: center;
+      }
+      .padding-copy {
+        padding: 10px 5% 10px 5% !important;
+        text-align: center;
+      }
+      .no-padding {
+        padding: 0 !important;
+      }
+      .section-padding {
+        padding: 50px 15px 50px 15px !important;
+      }
+      /* ADJUST BUTTONS ON MOBILE */
+      .mobile-button-container {
+        margin: 0 auto;
+        width: 100% !important;
+      }
+      .mobile-button {
+        padding: 15px !important;
+        border: 0 !important;
+        font-size: 16px !important;
+        display: block !important;
+      }
+    }
+    /* ANDROID CENTER FIX */
+    div[style*="margin: 16px 0;"] {
+      margin: 0 !important;
+    }
+    a {
+      color: white;
+      text-decoration: underline;
+    }
+    .blue-link {
+      color: #1B6B82;
+    }
+  </style>
+</head>
+<body style="margin: 0 !important; padding: 0 !important; background-color:#F5F5F5;">
+  <!-- ONE COLUMN SECTION -->
+  <table bgcolor="#F5F5F5" border="0" cellpadding="0" cellspacing="0" width="100%">
+    <tr>
+      <td align="center" style="padding: 60px 16px 16px; margin-top: -32px;" class="section-padding">
+        <!--[if (gte mso 9)|(IE)]>
+            <table align="center" border="0" cellspacing="0" cellpadding="0" width="500">
+            <tr>
+            <td align="center" valign="top" width="500">
+            <![endif]-->
+        <table bgcolor="#ffffff" border="0" cellpadding="0" cellspacing="0" width="100%" style="max-width: 520px;"
+          class="responsive-table">
+          <tr>
+            <td>
+              <table width="100%" border="0" cellspacing="0" cellpadding="0">
+                <tr>
+                  <td>
+                    <table width="100%" border="0" cellspacing="0" cellpadding="0">
+                      <tr>
+                        <td align="center"
+                          style="padding: 32px 0 0 0; font-size: 18px; line-height: 25px; font-family: Helvetica, Arial, sans-serif; color: #3F414F;"
+                          class="padding-copy">
+                          Cancer Immunologic Data Center (CIDC)</td>
+                      </tr>
+                      <tr>
+                        <td align="center"
+                          style="padding: 50px 32px 0 32px; line-height: 42px; font-family: Helvetica, Arial, sans-serif; color: #666666;">
+                          <h1 style="margin:0; mso-line-height-rule:exactly; padding: 0 32px 0 32px">
+                            $HEADING
+                          </h1>
+                        </td>
+                      </tr>
+                      <tr>
+                        <td align="center"
+                          style="padding: 40px 40px 40px 40px; font-size: 16px; line-height: 25px; font-family: Helvetica, Arial, sans-serif; color: #666666;"
+                          class="padding-copy">
+                          $CONTENT
+                        </td>
+                      </tr>
+                    </table>
+                  </td>
+                </tr>
+              </table>
+            </td>
+          </tr>
+        </table>
+        <!--[if (gte mso 9)|(IE)]>
+            </td>
+            </tr>
+            </table>
+            <![endif]-->
+      </td>
+    </tr>
+    <tr>
+      <td align="center" style="padding: 20px 0px;">
+        <!--[if (gte mso 9)|(IE)]>
+            <table align="center" border="0" cellspacing="0" cellpadding="0" width="500">
+            <tr>
+            <td align="center" valign="top" width="500">
+            <![endif]-->
+        <table bgcolor="#1B6B82" width="100%" border="0" cellspacing="0" cellpadding="0" align="center"
+          style="max-width: 520px; " class="responsive-table">
+          <tr>
+            <td align="center"
+              style="padding: 20px 0 0 0; font-size: 18px; line-height: 18px; font-family: Helvetica, Arial, sans-serif; color:#fff; text-align: center">
+              Need help?
+            </td>
+          </tr>
+          <tr>
+            <td align="center"
+              style="padding: 10px 0 20px 0; font-size: 14px; line-height: 18px; font-family: Helvetica, Arial, sans-serif; color:#fff; text-align: center">
+              Send us an email at <a href="mailto:ncicidcadmin@mail.nih.gov">ncicidcadmin@mail.nih.gov</a>
+            </td>
+          </tr>
+        </table>
+        <!--[if (gte mso 9)|(IE)]>
+            </td>
+            </tr>
+            </table>
+            <![endif]-->
+      </td>
+    </tr>
+    <tr>
+      <td align="center" style="padding: 20px 0px;">
+        <!--[if (gte mso 9)|(IE)]>
+              <table align="center" border="0" cellspacing="0" cellpadding="0" width="500">
+              <tr>
+              <td align="center" valign="top" width="500">
+              <![endif]-->
+        <table width="100%" border="0" cellspacing="0" cellpadding="0" align="center" style="max-width: 520px; "
+          class="responsive-table">
+          <tr>
+            <td align="center"
+              style="padding: 10px 0 20px 0; font-size: 14px; line-height: 18px; font-family: Helvetica, Arial, sans-serif; color:#666666;">
+              National Cancer Institute at the National institutes of Health
+            </td>
+          </tr>
+        </table>
+        <!--[if (gte mso 9)|(IE)]>
+              </td>
+              </tr>
+              </table>
+              <![endif]-->
+      </td>
+    </tr>
+  </table>
+</body>
+</html>

{nci_cidc_api_modules-1.2.12 → nci_cidc_api_modules-1.2.14}/cidc_api/shared/emails.py RENAMED Viewed

@@ -1,11 +1,12 @@
 """Template functions for CIDC email bodies."""
 import html
+import pathlib
 from functools import wraps
 from typing import List
 from . import gcloud_client
-from ..config.settings import ENV
+from ..config.settings import ENV, ALLOWED_CLIENT_URL, CIDC_CLINICAL_DATA_EMAIL, CIDC_ADMIN_EMAIL
 # emails this list for
 # - new user registration,
@@ -44,7 +45,7 @@ def confirm_account_approval(user) -> dict:
     html_content = f"""
     <p>Hello {user.first_n},</p>
     <p>
-        Your CIMAC-CIDC Portal account has been approved!
+        Your CIMAC-CIDC Portal account has been approved!
         To begin browsing and downloading data, visit https://cidc.nci.nih.gov.
     </p>
     <p>
@@ -150,3 +151,32 @@ def notify_mailing_list(subject: str, html_content: str) -> dict:
         "html_content": html_content,
     }
     return email
+with open(pathlib.Path(__file__).parent.joinpath("email_layout.html"), encoding="utf-8") as file:
+    EMAIL_LAYOUT = file.read()
+@sendable
+def new_validation_review(job: dict) -> dict:
+    # these two emails are set only in prod env file
+    if CIDC_CLINICAL_DATA_EMAIL and CIDC_ADMIN_EMAIL:
+        to_emails = [CIDC_CLINICAL_DATA_EMAIL, CIDC_ADMIN_EMAIL]
+    else:
+        to_emails = CIDC_MAILING_LIST
+    subject = f"Trial {job.trial_id} ({job.version}) Ready for Validation Review"
+    html_heading = "Clinical Data Upload Notification"
+    job_url = f"{ALLOWED_CLIENT_URL}/upload-clinical-data/{job.id}"
+    html_content = f"""
+        <b>Ready for Validation Review:</b><br>
+        <b><a class="blue-link" href={job_url}>Trial {job.trial_id} version {job.version} (Job ID {job.id})</a></b>
+        Please follow the link to access the trial's clinical data submission page.
+    """
+    return {
+        "to_emails": to_emails,
+        "subject": subject,
+        "html_content": EMAIL_LAYOUT.replace("$HEADING", html_heading).replace("$CONTENT", html_content),
+    }

{nci_cidc_api_modules-1.2.12 → nci_cidc_api_modules-1.2.14/nci_cidc_api_modules.egg-info}/PKG-INFO RENAMED Viewed

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: nci_cidc_api_modules
-Version: 1.2.12
+Version: 1.2.14
 Summary: SQLAlchemy data models and configuration tools used in the NCI CIDC API
 Home-page: https://github.com/NCI-CIDC/cidc-api-gae
 License: MIT license

{nci_cidc_api_modules-1.2.12 → nci_cidc_api_modules-1.2.14}/nci_cidc_api_modules.egg-info/SOURCES.txt RENAMED Viewed

@@ -18,6 +18,7 @@ cidc_api/models/files/details.py
 cidc_api/models/files/facets.py
 cidc_api/shared/__init__.py
 cidc_api/shared/auth.py
+cidc_api/shared/email_layout.html
 cidc_api/shared/emails.py
 cidc_api/shared/file_handling.py
 cidc_api/shared/gcloud_client.py

{nci_cidc_api_modules-1.2.12 → nci_cidc_api_modules-1.2.14}/setup.py RENAMED Viewed

@@ -16,6 +16,7 @@ setup(
     python_requires=">=3.13",
     install_requires=requirements,
     license="MIT license",
+    include_package_data=True,
     packages=[
         "cidc_api.config",
         "cidc_api.models",