nci-cidc-api-modules 1.2.0__tar.gz → 1.2.1__tar.gz

{nci_cidc_api_modules-1.2.0/nci_cidc_api_modules.egg-info → nci_cidc_api_modules-1.2.1}/PKG-INFO

@@ -1,34 +1,34 @@
 Metadata-Version: 2.4
 Name: nci_cidc_api_modules
-Version: 1.2.0
+Version: 1.2.1
 Summary: SQLAlchemy data models and configuration tools used in the NCI CIDC API
 Home-page: https://github.com/NCI-CIDC/cidc-api-gae
 License: MIT license
 Requires-Python: >=3.13
 Description-Content-Type: text/markdown
 License-File: LICENSE
-Requires-Dist: werkzeug~=3.1.3
-Requires-Dist: flask~=3.1.2
-Requires-Dist: flask-migrate~=4.1.0
-Requires-Dist: flask-sqlalchemy~=3.1.1
-Requires-Dist: sqlalchemy~=2.0.43
-Requires-Dist: marshmallow~=4.0.0
-Requires-Dist: marshmallow-sqlalchemy~=1.4.2
-Requires-Dist: google-cloud-storage~=3.3.0
-Requires-Dist: google-cloud-secret-manager~=2.24.0
-Requires-Dist: google-cloud-pubsub~=2.31.1
-Requires-Dist: google-cloud-bigquery~=3.36.0
-Requires-Dist: google-api-python-client~=2.179.0
-Requires-Dist: google-auth~=2.40.3
-Requires-Dist: packaging~=25.0
-Requires-Dist: pyarrow~=21.0.0
-Requires-Dist: numpy~=2.3.2
-Requires-Dist: pandas~=2.3.1
-Requires-Dist: python-dotenv~=1.1.1
-Requires-Dist: requests~=2.32.5
-Requires-Dist: jinja2~=3.1.6
-Requires-Dist: certifi~=2025.8.3
-Requires-Dist: cloud-sql-python-connector[pg8000]~=1.18.4
+Requires-Dist: werkzeug>=3.1.3
+Requires-Dist: flask>=3.1.2
+Requires-Dist: flask-migrate>=4.1.0
+Requires-Dist: flask-sqlalchemy>=3.1.1
+Requires-Dist: sqlalchemy>=2.0.43
+Requires-Dist: marshmallow>=4.0.0
+Requires-Dist: marshmallow-sqlalchemy>=1.4.2
+Requires-Dist: google-cloud-storage>=3.3.0
+Requires-Dist: google-cloud-secret-manager>=2.24.0
+Requires-Dist: google-cloud-pubsub>=2.31.1
+Requires-Dist: google-cloud-bigquery>=3.36.0
+Requires-Dist: google-api-python-client>=2.179.0
+Requires-Dist: google-auth>=2.40.3
+Requires-Dist: packaging>=25.0
+Requires-Dist: pyarrow>=21.0.0
+Requires-Dist: numpy>=2.3.2
+Requires-Dist: pandas>=2.3.1
+Requires-Dist: python-dotenv>=1.1.1
+Requires-Dist: requests>=2.32.5
+Requires-Dist: jinja2>=3.1.6
+Requires-Dist: certifi>=2025.8.3
+Requires-Dist: cloud-sql-python-connector[pg8000]>=1.18.4
 Requires-Dist: nci-cidc-schemas==0.28.2
 Dynamic: description
 Dynamic: description-content-type

{nci_cidc_api_modules-1.2.0 → nci_cidc_api_modules-1.2.1}/cidc_api/models/models.py

@@ -3571,3 +3571,11 @@ class FileValidationErrors(CommonColumns):
         new_error = FileValidationErrors(file_id=file_id, job_id=job_id, error_message=error_message, location=location)
         new_error.insert(session=session)
         return new_error
+
+    @classmethod
+    @with_default_session
+    def delete_by_file_ids(cls, file_ids: list[int], session: Session = None):
+        """Delete all validation errors for the given list of file_ids."""
+        if file_ids:
+            session.query(cls).filter(cls.file_id.in_(file_ids)).delete(synchronize_session=False)
+            session.commit()

{nci_cidc_api_modules-1.2.0 → nci_cidc_api_modules-1.2.1/nci_cidc_api_modules.egg-info}/PKG-INFO

@@ -1,34 +1,34 @@
 Metadata-Version: 2.4
 Name: nci_cidc_api_modules
-Version: 1.2.0
+Version: 1.2.1
 Summary: SQLAlchemy data models and configuration tools used in the NCI CIDC API
 Home-page: https://github.com/NCI-CIDC/cidc-api-gae
 License: MIT license
 Requires-Python: >=3.13
 Description-Content-Type: text/markdown
 License-File: LICENSE
-Requires-Dist: werkzeug~=3.1.3
-Requires-Dist: flask~=3.1.2
-Requires-Dist: flask-migrate~=4.1.0
-Requires-Dist: flask-sqlalchemy~=3.1.1
-Requires-Dist: sqlalchemy~=2.0.43
-Requires-Dist: marshmallow~=4.0.0
-Requires-Dist: marshmallow-sqlalchemy~=1.4.2
-Requires-Dist: google-cloud-storage~=3.3.0
-Requires-Dist: google-cloud-secret-manager~=2.24.0
-Requires-Dist: google-cloud-pubsub~=2.31.1
-Requires-Dist: google-cloud-bigquery~=3.36.0
-Requires-Dist: google-api-python-client~=2.179.0
-Requires-Dist: google-auth~=2.40.3
-Requires-Dist: packaging~=25.0
-Requires-Dist: pyarrow~=21.0.0
-Requires-Dist: numpy~=2.3.2
-Requires-Dist: pandas~=2.3.1
-Requires-Dist: python-dotenv~=1.1.1
-Requires-Dist: requests~=2.32.5
-Requires-Dist: jinja2~=3.1.6
-Requires-Dist: certifi~=2025.8.3
-Requires-Dist: cloud-sql-python-connector[pg8000]~=1.18.4
+Requires-Dist: werkzeug>=3.1.3
+Requires-Dist: flask>=3.1.2
+Requires-Dist: flask-migrate>=4.1.0
+Requires-Dist: flask-sqlalchemy>=3.1.1
+Requires-Dist: sqlalchemy>=2.0.43
+Requires-Dist: marshmallow>=4.0.0
+Requires-Dist: marshmallow-sqlalchemy>=1.4.2
+Requires-Dist: google-cloud-storage>=3.3.0
+Requires-Dist: google-cloud-secret-manager>=2.24.0
+Requires-Dist: google-cloud-pubsub>=2.31.1
+Requires-Dist: google-cloud-bigquery>=3.36.0
+Requires-Dist: google-api-python-client>=2.179.0
+Requires-Dist: google-auth>=2.40.3
+Requires-Dist: packaging>=25.0
+Requires-Dist: pyarrow>=21.0.0
+Requires-Dist: numpy>=2.3.2
+Requires-Dist: pandas>=2.3.1
+Requires-Dist: python-dotenv>=1.1.1
+Requires-Dist: requests>=2.32.5
+Requires-Dist: jinja2>=3.1.6
+Requires-Dist: certifi>=2025.8.3
+Requires-Dist: cloud-sql-python-connector[pg8000]>=1.18.4
 Requires-Dist: nci-cidc-schemas==0.28.2
 Dynamic: description
 Dynamic: description-content-type

nci_cidc_api_modules-1.2.1/nci_cidc_api_modules.egg-info/requires.txt

@@ -0,0 +1,23 @@
+werkzeug>=3.1.3
+flask>=3.1.2
+flask-migrate>=4.1.0
+flask-sqlalchemy>=3.1.1
+sqlalchemy>=2.0.43
+marshmallow>=4.0.0
+marshmallow-sqlalchemy>=1.4.2
+google-cloud-storage>=3.3.0
+google-cloud-secret-manager>=2.24.0
+google-cloud-pubsub>=2.31.1
+google-cloud-bigquery>=3.36.0
+google-api-python-client>=2.179.0
+google-auth>=2.40.3
+packaging>=25.0
+pyarrow>=21.0.0
+numpy>=2.3.2
+pandas>=2.3.1
+python-dotenv>=1.1.1
+requests>=2.32.5
+jinja2>=3.1.6
+certifi>=2025.8.3
+cloud-sql-python-connector[pg8000]>=1.18.4
+nci-cidc-schemas==0.28.2

nci_cidc_api_modules-1.2.1/requirements.modules.txt

@@ -0,0 +1,23 @@
+werkzeug>=3.1.3
+flask>=3.1.2
+flask-migrate>=4.1.0
+flask-sqlalchemy>=3.1.1
+sqlalchemy>=2.0.43
+marshmallow>=4.0.0
+marshmallow-sqlalchemy>=1.4.2
+google-cloud-storage>=3.3.0
+google-cloud-secret-manager>=2.24.0
+google-cloud-pubsub>=2.31.1
+google-cloud-bigquery>=3.36.0
+google-api-python-client>=2.179.0
+google-auth>=2.40.3
+packaging>=25.0
+pyarrow>=21.0.0
+numpy>=2.3.2
+pandas>=2.3.1
+python-dotenv>=1.1.1
+requests>=2.32.5
+jinja2>=3.1.6
+certifi>=2025.8.3
+cloud-sql-python-connector[pg8000]>=1.18.4
+nci-cidc-schemas==0.28.2

nci_cidc_api_modules-1.2.0/nci_cidc_api_modules.egg-info/requires.txt

@@ -1,23 +0,0 @@
-werkzeug~=3.1.3
-flask~=3.1.2
-flask-migrate~=4.1.0
-flask-sqlalchemy~=3.1.1
-sqlalchemy~=2.0.43
-marshmallow~=4.0.0
-marshmallow-sqlalchemy~=1.4.2
-google-cloud-storage~=3.3.0
-google-cloud-secret-manager~=2.24.0
-google-cloud-pubsub~=2.31.1
-google-cloud-bigquery~=3.36.0
-google-api-python-client~=2.179.0
-google-auth~=2.40.3
-packaging~=25.0
-pyarrow~=21.0.0
-numpy~=2.3.2
-pandas~=2.3.1
-python-dotenv~=1.1.1
-requests~=2.32.5
-jinja2~=3.1.6
-certifi~=2025.8.3
-cloud-sql-python-connector[pg8000]~=1.18.4
-nci-cidc-schemas==0.28.2

nci_cidc_api_modules-1.2.0/requirements.modules.txt

@@ -1,23 +0,0 @@
-werkzeug~=3.1.3
-flask~=3.1.2
-flask-migrate~=4.1.0
-flask-sqlalchemy~=3.1.1
-sqlalchemy~=2.0.43
-marshmallow~=4.0.0
-marshmallow-sqlalchemy~=1.4.2
-google-cloud-storage~=3.3.0
-google-cloud-secret-manager~=2.24.0
-google-cloud-pubsub~=2.31.1
-google-cloud-bigquery~=3.36.0
-google-api-python-client~=2.179.0
-google-auth~=2.40.3
-packaging~=25.0
-pyarrow~=21.0.0
-numpy~=2.3.2
-pandas~=2.3.1
-python-dotenv~=1.1.1
-requests~=2.32.5
-jinja2~=3.1.6
-certifi~=2025.8.3
-cloud-sql-python-connector[pg8000]~=1.18.4
-nci-cidc-schemas==0.28.2