nabu 2024.1.4__tar.gz → 2024.1.5__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (332) hide show
  1. {nabu-2024.1.4/nabu.egg-info → nabu-2024.1.5}/PKG-INFO +1 -1
  2. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/__init__.py +1 -1
  3. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/writer.py +2 -1
  4. {nabu-2024.1.4 → nabu-2024.1.5/nabu.egg-info}/PKG-INFO +1 -1
  5. {nabu-2024.1.4 → nabu-2024.1.5}/LICENSE +0 -0
  6. {nabu-2024.1.4 → nabu-2024.1.5}/README.md +0 -0
  7. {nabu-2024.1.4 → nabu-2024.1.5}/doc/conf.py +0 -0
  8. {nabu-2024.1.4 → nabu-2024.1.5}/doc/create_conf_doc.py +0 -0
  9. {nabu-2024.1.4 → nabu-2024.1.5}/doc/doc_config.py +0 -0
  10. {nabu-2024.1.4 → nabu-2024.1.5}/doc/get_mathjax.py +0 -0
  11. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/__init__.py +0 -0
  12. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/bootstrap.py +0 -0
  13. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/bootstrap_stitching.py +0 -0
  14. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/cast_volume.py +0 -0
  15. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/cli_configs.py +0 -0
  16. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/compare_volumes.py +0 -0
  17. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/composite_cor.py +0 -0
  18. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/correct_rot.py +0 -0
  19. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/create_distortion_map_from_poly.py +0 -0
  20. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/diag_to_pix.py +0 -0
  21. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/diag_to_rot.py +0 -0
  22. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/double_flatfield.py +0 -0
  23. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/generate_header.py +0 -0
  24. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/histogram.py +0 -0
  25. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/multicor.py +0 -0
  26. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/nx_z_splitter.py +0 -0
  27. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/parse_reconstruction_log.py +0 -0
  28. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/prepare_weights_double.py +0 -0
  29. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/reconstruct.py +0 -0
  30. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/reconstruct_helical.py +0 -0
  31. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/reduce_dark_flat.py +0 -0
  32. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/rotate.py +0 -0
  33. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/shrink_dataset.py +0 -0
  34. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/stitching.py +0 -0
  35. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/tests/test_reduce_dark_flat.py +0 -0
  36. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/utils.py +0 -0
  37. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/validator.py +0 -0
  38. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/__init__.py +0 -0
  39. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/convolution.py +0 -0
  40. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/fft.py +0 -0
  41. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/kernel.py +0 -0
  42. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/medfilt.py +0 -0
  43. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/padding.py +0 -0
  44. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/processing.py +0 -0
  45. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/ElementOp.cu +0 -0
  46. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/backproj.cu +0 -0
  47. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/backproj_polar.cu +0 -0
  48. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/boundary.h +0 -0
  49. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/convolution.cu +0 -0
  50. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/dfi_fftshift.cu +0 -0
  51. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/flatfield.cu +0 -0
  52. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/fourier_wavelets.cu +0 -0
  53. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/halftomo.cu +0 -0
  54. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/helical_padding.cu +0 -0
  55. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/histogram.cu +0 -0
  56. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/interpolation.cu +0 -0
  57. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/medfilt.cu +0 -0
  58. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/normalization.cu +0 -0
  59. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/padding.cu +0 -0
  60. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/proj.cu +0 -0
  61. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/rotation.cu +0 -0
  62. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/transpose.cu +0 -0
  63. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/tests/__init__.py +0 -0
  64. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/utils.py +0 -0
  65. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/__init__.py +0 -0
  66. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/alignment.py +0 -0
  67. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/cor.py +0 -0
  68. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/cor_sino.py +0 -0
  69. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/distortion.py +0 -0
  70. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/focus.py +0 -0
  71. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/tests/__init__.py +0 -0
  72. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/tests/test_alignment.py +0 -0
  73. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/tests/test_cor.py +0 -0
  74. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/tests/test_focus.py +0 -0
  75. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/tests/test_tilt.py +0 -0
  76. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/tests/test_translation.py +0 -0
  77. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/tilt.py +0 -0
  78. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/translation.py +0 -0
  79. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/utils.py +0 -0
  80. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/__init__.py +0 -0
  81. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/cast_volume.py +0 -0
  82. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/detector_distortion.py +0 -0
  83. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/reader.py +0 -0
  84. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/reader_helical.py +0 -0
  85. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/tests/__init__.py +0 -0
  86. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/tests/test_cast_volume.py +0 -0
  87. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/tests/test_detector_distortion.py +0 -0
  88. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/tests/test_writers.py +0 -0
  89. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/tiffwriter_zmm.py +0 -0
  90. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/utils.py +0 -0
  91. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/writer.py +0 -0
  92. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/__init__.py +0 -0
  93. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/binning.py +0 -0
  94. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/fftshift.py +0 -0
  95. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/filters.py +0 -0
  96. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/fourier_filters.py +0 -0
  97. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/histogram.py +0 -0
  98. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/histogram_cuda.py +0 -0
  99. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/kernel_base.py +0 -0
  100. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/padding.py +0 -0
  101. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/padding_base.py +0 -0
  102. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/processing_base.py +0 -0
  103. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/rotation.py +0 -0
  104. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/rotation_cuda.py +0 -0
  105. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/tests/__init__.py +0 -0
  106. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/tests/test_binning.py +0 -0
  107. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/tests/test_interpolation.py +0 -0
  108. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/transpose.py +0 -0
  109. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/unsharp.py +0 -0
  110. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/unsharp_cuda.py +0 -0
  111. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/unsharp_opencl.py +0 -0
  112. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/utils.py +0 -0
  113. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/__init__.py +0 -0
  114. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/fft.py +0 -0
  115. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/kernel.py +0 -0
  116. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/memcpy.py +0 -0
  117. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/padding.py +0 -0
  118. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/processing.py +0 -0
  119. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/src/ElementOp.cl +0 -0
  120. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/src/backproj.cl +0 -0
  121. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/src/fftshift.cl +0 -0
  122. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/src/halftomo.cl +0 -0
  123. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/src/padding.cl +0 -0
  124. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/src/roll.cl +0 -0
  125. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/src/transpose.cl +0 -0
  126. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/tests/__init__.py +0 -0
  127. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/utils.py +0 -0
  128. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/__init__.py +0 -0
  129. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/config.py +0 -0
  130. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/config_validators.py +0 -0
  131. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/datadump.py +0 -0
  132. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/dataset_validator.py +0 -0
  133. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/detector_distortion_provider.py +0 -0
  134. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/estimators.py +0 -0
  135. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/fallback_utils.py +0 -0
  136. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/fullfield/__init__.py +0 -0
  137. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/fullfield/chunked.py +0 -0
  138. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/fullfield/chunked_cuda.py +0 -0
  139. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/fullfield/computations.py +0 -0
  140. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/fullfield/dataset_validator.py +0 -0
  141. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/fullfield/nabu_config.py +0 -0
  142. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/fullfield/processconfig.py +0 -0
  143. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/fullfield/reconstruction.py +0 -0
  144. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/__init__.py +0 -0
  145. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/dataset_validator.py +0 -0
  146. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/fbp.py +0 -0
  147. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/filtering.py +0 -0
  148. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/gridded_accumulator.py +0 -0
  149. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/helical_chunked_regridded.py +0 -0
  150. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/helical_chunked_regridded_cuda.py +0 -0
  151. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/helical_reconstruction.py +0 -0
  152. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/helical_utils.py +0 -0
  153. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/nabu_config.py +0 -0
  154. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/processconfig.py +0 -0
  155. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/span_strategy.py +0 -0
  156. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/tests/__init__.py +0 -0
  157. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/tests/test_accumulator.py +0 -0
  158. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/tests/test_pipeline_elements_full.py +0 -0
  159. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/tests/test_strategy.py +0 -0
  160. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/utils.py +0 -0
  161. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/helical/weight_balancer.py +0 -0
  162. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/params.py +0 -0
  163. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/processconfig.py +0 -0
  164. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/tests/test_chunk_reader.py +0 -0
  165. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/tests/test_estimators.py +0 -0
  166. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/utils.py +0 -0
  167. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/xrdct/__init__.py +0 -0
  168. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/__init__.py +0 -0
  169. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/alignment.py +0 -0
  170. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/ccd.py +0 -0
  171. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/ccd_cuda.py +0 -0
  172. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/ctf.py +0 -0
  173. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/ctf_cuda.py +0 -0
  174. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/distortion.py +0 -0
  175. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/double_flatfield.py +0 -0
  176. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/double_flatfield_cuda.py +0 -0
  177. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/double_flatfield_variable_region.py +0 -0
  178. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/flatfield.py +0 -0
  179. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/flatfield_cuda.py +0 -0
  180. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/flatfield_variable_region.py +0 -0
  181. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/phase.py +0 -0
  182. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/phase_cuda.py +0 -0
  183. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/shift.py +0 -0
  184. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/shift_cuda.py +0 -0
  185. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/tests/__init__.py +0 -0
  186. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/tests/test_ccd_corr.py +0 -0
  187. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/tests/test_ctf.py +0 -0
  188. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/tests/test_double_flatfield.py +0 -0
  189. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/tests/test_flatfield.py +0 -0
  190. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/tests/test_paganin.py +0 -0
  191. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/tests/test_vshift.py +0 -0
  192. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/__init__.py +0 -0
  193. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/convolution_cuda.py +0 -0
  194. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/fft_base.py +0 -0
  195. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/fft_cuda.py +0 -0
  196. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/fft_opencl.py +0 -0
  197. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/fftshift.py +0 -0
  198. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/histogram.py +0 -0
  199. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/histogram_cuda.py +0 -0
  200. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/kernel_base.py +0 -0
  201. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/medfilt_cuda.py +0 -0
  202. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/muladd.py +0 -0
  203. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/muladd_cuda.py +0 -0
  204. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/padding_base.py +0 -0
  205. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/padding_cuda.py +0 -0
  206. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/padding_opencl.py +0 -0
  207. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/processing_base.py +0 -0
  208. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/roll_opencl.py +0 -0
  209. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/rotation.py +0 -0
  210. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/rotation_cuda.py +0 -0
  211. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/tests/__init__.py +0 -0
  212. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/tests/test_fft.py +0 -0
  213. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/tests/test_fftshift.py +0 -0
  214. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/tests/test_histogram.py +0 -0
  215. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/tests/test_medfilt.py +0 -0
  216. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/tests/test_muladd.py +0 -0
  217. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/tests/test_padding.py +0 -0
  218. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/tests/test_roll.py +0 -0
  219. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/tests/test_rotation.py +0 -0
  220. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/tests/test_transpose.py +0 -0
  221. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/tests/test_unsharp.py +0 -0
  222. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/transpose.py +0 -0
  223. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/unsharp.py +0 -0
  224. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/unsharp_cuda.py +0 -0
  225. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/processing/unsharp_opencl.py +0 -0
  226. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/__init__.py +0 -0
  227. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/cone.py +0 -0
  228. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/fbp.py +0 -0
  229. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/fbp_base.py +0 -0
  230. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/fbp_opencl.py +0 -0
  231. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/filtering.py +0 -0
  232. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/filtering_cuda.py +0 -0
  233. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/filtering_opencl.py +0 -0
  234. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/projection.py +0 -0
  235. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/reconstructor.py +0 -0
  236. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/reconstructor_cuda.py +0 -0
  237. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/rings.py +0 -0
  238. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/rings_cuda.py +0 -0
  239. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/sinogram.py +0 -0
  240. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/sinogram_cuda.py +0 -0
  241. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/sinogram_opencl.py +0 -0
  242. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/tests/__init__.py +0 -0
  243. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/tests/test_cone.py +0 -0
  244. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/tests/test_deringer.py +0 -0
  245. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/tests/test_fbp.py +0 -0
  246. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/tests/test_filtering.py +0 -0
  247. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/tests/test_halftomo.py +0 -0
  248. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/tests/test_projector.py +0 -0
  249. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/tests/test_reconstructor.py +0 -0
  250. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/reconstruction/tests/test_sino_normalization.py +0 -0
  251. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/__init__.py +0 -0
  252. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/cli/__init__.py +0 -0
  253. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/cor.py +0 -0
  254. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/dataset_analyzer.py +0 -0
  255. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/gpu.py +0 -0
  256. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/logger.py +0 -0
  257. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/nxflatfield.py +0 -0
  258. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/templates/__init__.py +0 -0
  259. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/templates/bm05_pag.conf +0 -0
  260. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/templates/id16_ctf.conf +0 -0
  261. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/templates/id16_holo.conf +0 -0
  262. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/templates/id19_pag.conf +0 -0
  263. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/tests/__init__.py +0 -0
  264. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/tests/test_nxflatfield.py +0 -0
  265. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/tests/test_units.py +0 -0
  266. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/resources/utils.py +0 -0
  267. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/__init__.py +0 -0
  268. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/alignment.py +0 -0
  269. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/config.py +0 -0
  270. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/definitions.py +0 -0
  271. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/frame_composition.py +0 -0
  272. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/overlap.py +0 -0
  273. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/sample_normalization.py +0 -0
  274. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/slurm_utils.py +0 -0
  275. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/tests/__init__.py +0 -0
  276. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/tests/test_alignment.py +0 -0
  277. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/tests/test_config.py +0 -0
  278. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/tests/test_frame_composition.py +0 -0
  279. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/tests/test_overlap.py +0 -0
  280. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/tests/test_sample_normalization.py +0 -0
  281. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/tests/test_slurm_utils.py +0 -0
  282. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/tests/test_utils.py +0 -0
  283. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/tests/test_z_stitching.py +0 -0
  284. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/utils.py +0 -0
  285. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/stitching/z_stitching.py +0 -0
  286. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/tests.py +0 -0
  287. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/testutils.py +0 -0
  288. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/thirdparty/__init__.py +0 -0
  289. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/thirdparty/algotom_convert_sino.py +0 -0
  290. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/thirdparty/pore3d_deringer_munch.py +0 -0
  291. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/thirdparty/tomocupy_remove_stripe.py +0 -0
  292. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/thirdparty/tomopy_phase.py +0 -0
  293. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/thirdparty/tomwer_load_flats_darks.py +0 -0
  294. {nabu-2024.1.4 → nabu-2024.1.5}/nabu/utils.py +0 -0
  295. {nabu-2024.1.4 → nabu-2024.1.5}/nabu.egg-info/SOURCES.txt +0 -0
  296. {nabu-2024.1.4 → nabu-2024.1.5}/nabu.egg-info/dependency_links.txt +0 -0
  297. {nabu-2024.1.4 → nabu-2024.1.5}/nabu.egg-info/entry_points.txt +0 -0
  298. {nabu-2024.1.4 → nabu-2024.1.5}/nabu.egg-info/requires.txt +0 -0
  299. {nabu-2024.1.4 → nabu-2024.1.5}/nabu.egg-info/top_level.txt +0 -0
  300. {nabu-2024.1.4 → nabu-2024.1.5}/pyproject.toml +0 -0
  301. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/align_test.py +0 -0
  302. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/app.py +0 -0
  303. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/binning_cython.py +0 -0
  304. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/circ_sm.py +0 -0
  305. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/composite_image.py +0 -0
  306. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/convert_id15.py +0 -0
  307. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/do_test_ctf.py +0 -0
  308. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/esrf_envs.py +0 -0
  309. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/fbp_polar.py +0 -0
  310. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/fbp_tilt.py +0 -0
  311. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/interleaved.py +0 -0
  312. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/interp_sinos_halftomo.py +0 -0
  313. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/linear_interp.py +0 -0
  314. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/merge_recs.py +0 -0
  315. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/moduleutils.py +0 -0
  316. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/nbreconstruct.py +0 -0
  317. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/pag_margin.py +0 -0
  318. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/parse.py +0 -0
  319. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/plot.py +0 -0
  320. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/proj3D.py +0 -0
  321. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/rec_bm05.py +0 -0
  322. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/rec_thread.py +0 -0
  323. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/shift_bilinear2.py +0 -0
  324. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/sinotilt.py +0 -0
  325. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/sysutils.py +0 -0
  326. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/test_mp_queue.py +0 -0
  327. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/tilt.py +0 -0
  328. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/utils.py +0 -0
  329. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/vo.py +0 -0
  330. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/workers.py +0 -0
  331. {nabu-2024.1.4 → nabu-2024.1.5}/sandbox/xrdrec_pyFAI_data.py +0 -0
  332. {nabu-2024.1.4 → nabu-2024.1.5}/setup.cfg +0 -0
{nabu-2024.1.4/nabu.egg-info → nabu-2024.1.5}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: nabu
3
- Version: 2024.1.4
3
+ Version: 2024.1.5
4
4
  Summary: Nabu - Tomography software
5
5
  Author-email: Pierre Paleo <pierre.paleo@esrf.fr>, Henri Payno <henri.payno@esrf.fr>, Alessandro Mirone <mirone@esrf.fr>, Jérôme Lesaint <jerome.lesaint@esrf.fr>
6
6
  Maintainer-email: Pierre Paleo <pierre.paleo@esrf.fr>
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/__init__.py RENAMED
@@ -1,4 +1,4 @@
1
- __version__ = "2024.1.4"
1
+ __version__ = "2024.1.5"
2
2
  __nabu_modules__ = [
3
3
  "app",
4
4
  "cuda",
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/writer.py RENAMED
@@ -136,8 +136,9 @@ class WriterManager:
136
136
  ),
137
137
  "overwrite": self.overwrite,
138
138
  "append": self.extra_options.get("single_output_file_initialized", False),
139
- "hst_metadata": self.extra_options.get("raw_vol_metadata", {}),
140
139
  }
140
+ if self.file_format == "vol":
141
+ writer_kwargs["hst_metadata"] = self.extra_options.get("raw_vol_metadata", {})
141
142
  else:
142
143
  raise ValueError("Unsupported file format: %s" % self.file_format)
143
144
  self._h5_entry = self.metadata.get("entry", "entry")
{nabu-2024.1.4 → nabu-2024.1.5/nabu.egg-info}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.1
2
2
  Name: nabu
3
- Version: 2024.1.4
3
+ Version: 2024.1.5
4
4
  Summary: Nabu - Tomography software
5
5
  Author-email: Pierre Paleo <pierre.paleo@esrf.fr>, Henri Payno <henri.payno@esrf.fr>, Alessandro Mirone <mirone@esrf.fr>, Jérôme Lesaint <jerome.lesaint@esrf.fr>
6
6
  Maintainer-email: Pierre Paleo <pierre.paleo@esrf.fr>
{nabu-2024.1.4 → nabu-2024.1.5}/LICENSE RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/README.md RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/doc/conf.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/doc/create_conf_doc.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/doc/doc_config.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/doc/get_mathjax.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/__init__.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/bootstrap.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/cast_volume.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/cli_configs.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/correct_rot.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/diag_to_pix.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/diag_to_rot.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/histogram.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/multicor.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/reconstruct.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/rotate.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/stitching.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/utils.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/app/validator.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/__init__.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/fft.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/kernel.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/medfilt.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/padding.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/processing.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/src/proj.cu RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/cuda/utils.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/cor.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/estimation/tilt.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/__init__.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/cast_volume.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/reader.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/utils.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/io/writer.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/__init__.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/binning.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/fftshift.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/filters.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/histogram.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/padding.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/rotation.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/transpose.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/unsharp.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/misc/utils.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/__init__.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/fft.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/kernel.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/memcpy.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/padding.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/src/roll.cl RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/opencl/utils.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/config.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/params.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/pipeline/utils.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/ccd.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/ctf.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/phase.py RENAMED
File without changes
{nabu-2024.1.4 → nabu-2024.1.5}/nabu/preproc/shift.py RENAMED
File without changes