myokit 1.39.0__tar.gz → 1.39.1__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (417) hide show
  1. {myokit-1.39.0/myokit.egg-info → myokit-1.39.1}/PKG-INFO +1 -1
  2. {myokit-1.39.0 → myokit-1.39.1}/myokit/_config.py +18 -19
  3. {myokit-1.39.0 → myokit-1.39.1}/myokit/_myokit_version.py +1 -1
  4. {myokit-1.39.0 → myokit-1.39.1/myokit.egg-info}/PKG-INFO +1 -1
  5. {myokit-1.39.0 → myokit-1.39.1}/LICENSE.txt +0 -0
  6. {myokit-1.39.0 → myokit-1.39.1}/MANIFEST.in +0 -0
  7. {myokit-1.39.0 → myokit-1.39.1}/README.md +0 -0
  8. {myokit-1.39.0 → myokit-1.39.1}/myokit/__init__.py +0 -0
  9. {myokit-1.39.0 → myokit-1.39.1}/myokit/__main__.py +0 -0
  10. {myokit-1.39.0 → myokit-1.39.1}/myokit/_aux.py +0 -0
  11. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/example.mmt +0 -0
  12. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/find.png +0 -0
  13. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-datablock-viewer-128.xpm +0 -0
  14. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-datablock-viewer-16.xpm +0 -0
  15. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-datablock-viewer-24.xpm +0 -0
  16. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-datablock-viewer-256.xpm +0 -0
  17. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-datablock-viewer-32.xpm +0 -0
  18. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-datablock-viewer-48.xpm +0 -0
  19. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-datablock-viewer-64.xpm +0 -0
  20. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-datablock-viewer-96.xpm +0 -0
  21. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-datablock-viewer.ico +0 -0
  22. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-datablock-viewer.png +0 -0
  23. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-ide-128.xpm +0 -0
  24. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-ide-16.xpm +0 -0
  25. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-ide-24.xpm +0 -0
  26. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-ide-256.xpm +0 -0
  27. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-ide-32.xpm +0 -0
  28. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-ide-48.xpm +0 -0
  29. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-ide-64.xpm +0 -0
  30. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-ide-96.xpm +0 -0
  31. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-ide.ico +0 -0
  32. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/icon-ide.png +0 -0
  33. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/new.png +0 -0
  34. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/open.png +0 -0
  35. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/redo.png +0 -0
  36. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/run.png +0 -0
  37. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/save.png +0 -0
  38. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/gui/undo.png +0 -0
  39. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/install-lin/myokit-datablock-viewer.desktop +0 -0
  40. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/install-lin/myokit-datalog-viewer.desktop +0 -0
  41. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/install-lin/myokit-ide.desktop +0 -0
  42. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/install-lin/myokit.lang +0 -0
  43. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/install-lin/x-abf.xml +0 -0
  44. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/install-lin/x-cellml.xml +0 -0
  45. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/install-lin/x-myokit.xml +0 -0
  46. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/install-lin/x-wcp.xml +0 -0
  47. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/install-win/menu.json +0 -0
  48. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/LICENSE +0 -0
  49. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/cvodes/cvodes.h +0 -0
  50. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/cvodes/cvodes_direct.h +0 -0
  51. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/cvodes/cvodes_ls.h +0 -0
  52. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/nvector/nvector_serial.h +0 -0
  53. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/sundials/sundials_config.h +0 -0
  54. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/sundials/sundials_dense.h +0 -0
  55. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/sundials/sundials_direct.h +0 -0
  56. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/sundials/sundials_export.h +0 -0
  57. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/sundials/sundials_iterative.h +0 -0
  58. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/sundials/sundials_linearsolver.h +0 -0
  59. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/sundials/sundials_matrix.h +0 -0
  60. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/sundials/sundials_nonlinearsolver.h +0 -0
  61. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/sundials/sundials_nvector.h +0 -0
  62. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/sundials/sundials_types.h +0 -0
  63. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/sundials/sundials_version.h +0 -0
  64. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/sunlinsol/sunlinsol_dense.h +0 -0
  65. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/include/sunmatrix/sunmatrix_dense.h +0 -0
  66. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/lib/sundials_cvodes.dll +0 -0
  67. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/lib/sundials_cvodes.lib +0 -0
  68. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/lib/sundials_nvecserial.dll +0 -0
  69. {myokit-1.39.0 → myokit-1.39.1}/myokit/_bin/sundials-win-vs/lib/sundials_nvecserial.lib +0 -0
  70. {myokit-1.39.0 → myokit-1.39.1}/myokit/_datablock.py +0 -0
  71. {myokit-1.39.0 → myokit-1.39.1}/myokit/_datalog.py +0 -0
  72. {myokit-1.39.0 → myokit-1.39.1}/myokit/_err.py +0 -0
  73. {myokit-1.39.0 → myokit-1.39.1}/myokit/_expressions.py +0 -0
  74. {myokit-1.39.0 → myokit-1.39.1}/myokit/_io.py +0 -0
  75. {myokit-1.39.0 → myokit-1.39.1}/myokit/_model_api.py +0 -0
  76. {myokit-1.39.0 → myokit-1.39.1}/myokit/_parsing.py +0 -0
  77. {myokit-1.39.0 → myokit-1.39.1}/myokit/_progress.py +0 -0
  78. {myokit-1.39.0 → myokit-1.39.1}/myokit/_protocol.py +0 -0
  79. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/__init__.py +0 -0
  80. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/cable.c +0 -0
  81. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/cable.py +0 -0
  82. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/cmodel.h +0 -0
  83. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/cmodel.py +0 -0
  84. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/compiler.c +0 -0
  85. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/compiler.py +0 -0
  86. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/cvodessim.c +0 -0
  87. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/cvodessim.py +0 -0
  88. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/differential.hpp +0 -0
  89. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/fiber_tissue.c +0 -0
  90. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/fiber_tissue.py +0 -0
  91. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/jacobian.cpp +0 -0
  92. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/jacobian.py +0 -0
  93. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/mcl.h +0 -0
  94. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/opencl.c +0 -0
  95. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/opencl.py +0 -0
  96. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/openclsim.c +0 -0
  97. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/openclsim.cl +0 -0
  98. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/openclsim.py +0 -0
  99. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/pacing.h +0 -0
  100. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/rhs.c +0 -0
  101. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/rhs.py +0 -0
  102. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/sundials.c +0 -0
  103. {myokit-1.39.0 → myokit-1.39.1}/myokit/_sim/sundials.py +0 -0
  104. {myokit-1.39.0 → myokit-1.39.1}/myokit/_system.py +0 -0
  105. {myokit-1.39.0 → myokit-1.39.1}/myokit/_unit.py +0 -0
  106. {myokit-1.39.0 → myokit-1.39.1}/myokit/float.py +0 -0
  107. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/__init__.py +0 -0
  108. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/ansic/__init__.py +0 -0
  109. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/ansic/_ewriter.py +0 -0
  110. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/ansic/_exporter.py +0 -0
  111. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/ansic/template/cable.c +0 -0
  112. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/ansic/template/euler.c +0 -0
  113. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/ansic/template/sim.c +0 -0
  114. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/axon/__init__.py +0 -0
  115. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/axon/_abf.py +0 -0
  116. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/axon/_atf.py +0 -0
  117. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/axon/_importer.py +0 -0
  118. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cellml/__init__.py +0 -0
  119. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cellml/_ewriter.py +0 -0
  120. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cellml/_exporter.py +0 -0
  121. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cellml/_importer.py +0 -0
  122. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cellml/v1/__init__.py +0 -0
  123. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cellml/v1/_api.py +0 -0
  124. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cellml/v1/_parser.py +0 -0
  125. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cellml/v1/_writer.py +0 -0
  126. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cellml/v2/__init__.py +0 -0
  127. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cellml/v2/_api.py +0 -0
  128. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cellml/v2/_parser.py +0 -0
  129. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cellml/v2/_writer.py +0 -0
  130. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/channelml/__init__.py +0 -0
  131. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/channelml/_importer.py +0 -0
  132. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cpp/__init__.py +0 -0
  133. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cpp/_ewriter.py +0 -0
  134. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cuda/__init__.py +0 -0
  135. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cuda/_ewriter.py +0 -0
  136. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cuda/_exporter.py +0 -0
  137. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/cuda/template/kernel.cu +0 -0
  138. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/diffsl/__init__.py +0 -0
  139. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/diffsl/_ewriter.py +0 -0
  140. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/diffsl/_exporter.py +0 -0
  141. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/easyml/__init__.py +0 -0
  142. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/easyml/_ewriter.py +0 -0
  143. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/easyml/_exporter.py +0 -0
  144. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/heka/__init__.py +0 -0
  145. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/heka/_importer.py +0 -0
  146. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/heka/_patchmaster.py +0 -0
  147. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/html/__init__.py +0 -0
  148. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/html/_exporter.py +0 -0
  149. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/html/_flatten.py +0 -0
  150. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/latex/__init__.py +0 -0
  151. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/latex/_ewriter.py +0 -0
  152. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/latex/_exporter.py +0 -0
  153. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/mathml/__init__.py +0 -0
  154. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/mathml/_ewriter.py +0 -0
  155. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/mathml/_parser.py +0 -0
  156. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/matlab/__init__.py +0 -0
  157. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/matlab/_ewriter.py +0 -0
  158. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/matlab/_exporter.py +0 -0
  159. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/matlab/template/constants.m +0 -0
  160. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/matlab/template/ifthenelse.m +0 -0
  161. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/matlab/template/main.m +0 -0
  162. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/matlab/template/model.m +0 -0
  163. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/matlab/template/model_wrapper.m +0 -0
  164. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/opencl/__init__.py +0 -0
  165. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/opencl/_ewriter.py +0 -0
  166. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/opencl/_exporter.py +0 -0
  167. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/opencl/template/cable.c +0 -0
  168. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/opencl/template/kernel.cl +0 -0
  169. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/opencl/template/minilog.py +0 -0
  170. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/opencl/template/plot.py +0 -0
  171. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/opencl/template/test.sh +0 -0
  172. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/python/__init__.py +0 -0
  173. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/python/_ewriter.py +0 -0
  174. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/python/_exporter.py +0 -0
  175. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/python/template/sim.py +0 -0
  176. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/sbml/__init__.py +0 -0
  177. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/sbml/_api.py +0 -0
  178. {myokit-1.39.0 → myokit-1.39.1}/myokit/formats/sbml/_exporter.py +0 -0
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  348. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_cellml.py +0 -0
  349. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_channelml.py +0 -0
  350. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_cpp.py +0 -0
  351. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_cuda.py +0 -0
  352. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_diffsl.py +0 -0
  353. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_easyml.py +0 -0
  354. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_exporters_run.py +0 -0
  355. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_html.py +0 -0
  356. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_latex.py +0 -0
  357. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_mathml_content.py +0 -0
  358. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_mathml_presentation.py +0 -0
  359. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_matlab.py +0 -0
  360. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_opencl.py +0 -0
  361. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_python.py +0 -0
  362. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_sbml.py +0 -0
  363. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_stan.py +0 -0
  364. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_sympy.py +0 -0
  365. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_formats_wcp.py +0 -0
  366. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_io.py +0 -0
  367. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_jacobian_calculator.py +0 -0
  368. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_jacobian_tracer.py +0 -0
  369. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_lib_deps.py +0 -0
  370. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_lib_guess.py +0 -0
  371. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_lib_hh.py +0 -0
  372. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_lib_markov.py +0 -0
  373. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_lib_multi.py +0 -0
  374. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_lib_plots.py +0 -0
  375. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_meta.py +0 -0
  376. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_model.py +0 -0
  377. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_model_building.py +0 -0
  378. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_opencl_info.py +0 -0
  379. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_pacing_factory.py +0 -0
  380. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_pacing_system_c.py +0 -0
  381. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_pacing_system_py.py +0 -0
  382. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_parsing.py +0 -0
  383. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_progress_reporters.py +0 -0
  384. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_protocol.py +0 -0
  385. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_protocol_floating_point.py +0 -0
  386. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_protocol_time_series.py +0 -0
  387. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_pype.py +0 -0
  388. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_quantity.py +0 -0
  389. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_rhs_benchmarker.py +0 -0
  390. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_sbml_api.py +0 -0
  391. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_sbml_export.py +0 -0
  392. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_sbml_parser.py +0 -0
  393. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_simulation_1d.py +0 -0
  394. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_simulation_cvodes.py +0 -0
  395. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_simulation_cvodes_from_disk.py +0 -0
  396. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_simulation_fiber_tissue.py +0 -0
  397. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_simulation_log_interval.py +0 -0
  398. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_simulation_opencl.py +0 -0
  399. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_simulation_opencl_log_interval.py +0 -0
  400. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_simulation_opencl_vs_cvode.py +0 -0
  401. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_simulation_opencl_vs_sim1d.py +0 -0
  402. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_system_info.py +0 -0
  403. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_tools.py +0 -0
  404. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_unit.py +0 -0
  405. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_user_functions.py +0 -0
  406. {myokit-1.39.0 → myokit-1.39.1}/myokit/tests/test_variable.py +0 -0
  407. {myokit-1.39.0 → myokit-1.39.1}/myokit/tools.py +0 -0
  408. {myokit-1.39.0 → myokit-1.39.1}/myokit/units.py +0 -0
  409. {myokit-1.39.0 → myokit-1.39.1}/myokit.egg-info/SOURCES.txt +0 -0
  410. {myokit-1.39.0 → myokit-1.39.1}/myokit.egg-info/dependency_links.txt +0 -0
  411. {myokit-1.39.0 → myokit-1.39.1}/myokit.egg-info/entry_points.txt +0 -0
  412. {myokit-1.39.0 → myokit-1.39.1}/myokit.egg-info/not-zip-safe +0 -0
  413. {myokit-1.39.0 → myokit-1.39.1}/myokit.egg-info/requires.txt +0 -0
  414. {myokit-1.39.0 → myokit-1.39.1}/myokit.egg-info/top_level.txt +0 -0
  415. {myokit-1.39.0 → myokit-1.39.1}/pyproject.toml +0 -0
  416. {myokit-1.39.0 → myokit-1.39.1}/setup.cfg +0 -0
  417. {myokit-1.39.0 → myokit-1.39.1}/setup.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: myokit
3
- Version: 1.39.0
3
+ Version: 1.39.1
4
4
  Summary: A modeling and simulation tool for cardiac cellular electrophysiology
5
5
  Home-page: http://myokit.org
6
6
  Author: Michael Clerx
@@ -45,9 +45,9 @@ def _create(path):
45
45
  'compatibility',
46
46
  '# Optional settings to make Myokit work on tricky systems.')
47
47
  config.set('compatibility', '# Don\'t capture compiler output.')
48
- config.set('compatibility', '#no_capture = True')
48
+ config.set('compatibility', '#no_capture', 'True')
49
49
  config.set('compatibility', '# Don\'t use the file-descriptor method.')
50
- config.set('compatibility', '#no_fd_capture = True')
50
+ config.set('compatibility', '#no_fd_capture', 'True')
51
51
 
52
52
  # Date format
53
53
  config.add_section('time')
@@ -63,16 +63,16 @@ def _create(path):
63
63
  config.set('gui', '# Backend to use for graphical user interface.')
64
64
  config.set('gui', '# Valid options are pyqt6, pyqt5, pyside6 and pyside2.')
65
65
  config.set('gui', '# Leave unset for automatic selection.')
66
- config.set('gui', '#backend = pyqt6')
67
- config.set('gui', '#backend = pyqt5')
68
- config.set('gui', '#backend = pyside6')
69
- config.set('gui', '#backend = pyside2')
66
+ config.set('gui', '#backend', 'pyqt6')
67
+ config.set('gui', '#backend', 'pyqt5')
68
+ config.set('gui', '#backend', 'pyside6')
69
+ config.set('gui', '#backend', 'pyside2')
70
70
 
71
71
  # Locations of sundials library
72
72
  config.add_section('sundials')
73
73
  config.set(
74
- 'sundials', '# Location of sundials shared libary files'
75
- ' (.so, .dll, or .dylib).')
74
+ 'sundials',
75
+ '# Location of sundials shared libary files (.so, .dll, or .dylib).')
76
76
  config.set('sundials', '# Multiple paths can be set using ; as separator.')
77
77
 
78
78
  if system == 'Windows': # pragma: no linux cover
@@ -159,9 +159,9 @@ def _create(path):
159
159
  # All windowses
160
160
  c64 = 'C:\\Program Files\\'
161
161
  config.set('opencl', 'inc', ';'.join([
162
- c64 + 'Intel\\OpenCL SDK\\6.3\\include',
163
- c64 + 'AMD APP SDK\\2.9\\include',
164
- c64 + 'NVIDIA GPU Computing Toolkit\\CUDA\\v11.8\\include',
162
+ f'{c64}Intel\\OpenCL SDK\\6.3\\include',
163
+ f'{c64}AMD APP SDK\\2.9\\include',
164
+ f'{c64}NVIDIA GPU Computing Toolkit\\CUDA\\v11.8\\include',
165
165
  ]))
166
166
  else:
167
167
  # Linux and mac
@@ -205,10 +205,9 @@ def _load():
205
205
  if m is not None:
206
206
  x = m.start(1) - 1
207
207
  raise ImportError(
208
- 'Unsupported syntax found in ' + str(path) + ' on line '
209
- + str(1 + i) + ', character ' + str(x) + ', semicolons (;)'
210
- + ' must not be preceded by whitespace: ```'
211
- + line.strip() + '```.')
208
+ f'Unsupported syntax found in {path} on line {i + 1},'
209
+ f' character {x}, semicolons (;) must not be preceded by'
210
+ f' whitespace: ```{line.strip()}```.')
212
211
  del lines, inline_comment
213
212
 
214
213
  # Create the config parser (no value allows comments)
@@ -230,7 +229,7 @@ def _load():
230
229
  elif x != '':
231
230
  warnings.warn(
232
231
  'Invalid setting in myokit.ini. Expected values for no_capture'
233
- ' are true, false, or not set (empty), but got: ' + x)
232
+ f' are true, false, or not set (empty), but got: {x}.')
234
233
 
235
234
  if config.has_option('compatibility', 'no_fd_capture'):
236
235
  x = config.get('compatibility', 'no_fd_capture').strip().lower()
@@ -241,8 +240,8 @@ def _load():
241
240
  elif x != '':
242
241
  warnings.warn(
243
242
  'Invalid setting in myokit.ini. Expected values for'
244
- ' no_fd_capture are true, false, or not set (empty), but got: '
245
- + x)
243
+ ' no_fd_capture are true, false, or not set (empty), but'
244
+ f' got: {x}.')
246
245
 
247
246
  # Date format
248
247
  if config.has_option('time', 'date_format'):
@@ -282,7 +281,7 @@ def _load():
282
281
  elif x != '':
283
282
  warnings.warn(
284
283
  'Invalid setting in myokit.ini. Expected values for backend'
285
- ' are pyqt6, pyqt5, pyside6, or pyside2. Got: ' + x)
284
+ f' are pyqt6, pyqt5, pyside6, or pyside2, but got: {x}.')
286
285
 
287
286
  # Sundials libraries, header files, and version
288
287
  if config.has_option('sundials', 'lib'):
@@ -14,7 +14,7 @@ __release__ = True
14
14
  # incompatibility
15
15
  # - Changes to revision indicate bugfixes, tiny new features
16
16
  # - There is no significance to odd/even numbers
17
- __version_tuple__ = 1, 39, 0
17
+ __version_tuple__ = 1, 39, 1
18
18
 
19
19
  # String version of the version number
20
20
  __version__ = '.'.join([str(x) for x in __version_tuple__])
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: myokit
3
- Version: 1.39.0
3
+ Version: 1.39.1
4
4
  Summary: A modeling and simulation tool for cardiac cellular electrophysiology
5
5
  Home-page: http://myokit.org
6
6
  Author: Michael Clerx
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