mtbls-mhd-integration 0.0.10__tar.gz → 0.0.11__tar.gz

{mtbls_mhd_integration-0.0.10/mtbls_mhd_integration.egg-info → mtbls_mhd_integration-0.0.11}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: mtbls-mhd-integration
-Version: 0.0.10
+Version: 0.0.11
 Summary: MetaboLights - MetabolomicsHub Integration
 Author-email: MetaboLights Team <metabolights-help@ebi.ac.uk>
 License-Expression: Apache-2.0

{mtbls_mhd_integration-0.0.10 → mtbls_mhd_integration-0.0.11}/mtbls2mhd/__init__.py

@@ -1,4 +1,4 @@
-__version__ = "v0.0.10"
+__version__ = "v0.0.11"
 
 import pathlib
 import sys

{mtbls_mhd_integration-0.0.10 → mtbls_mhd_integration-0.0.11}/mtbls2mhd/v0_1/legacy/db_metadata_collector.py

@@ -266,7 +266,9 @@ class DbMetadataCollector(AbstractDbMetadataCollector):
         study_db_metadata.first_private_date = self._get_date_string(
             study["first_private_date"]
         )
-        study_db_metadata.submission_date = self.get_date(study["submissiondate"])
+        study_db_metadata.submission_date = self._get_date_string(
+            study["submissiondate"]
+        )
 
         study_db_metadata.curation_request = CurationRequest.get_from_int(
             study["curation_request"]
@@ -274,7 +276,7 @@ class DbMetadataCollector(AbstractDbMetadataCollector):
         study_db_metadata.first_public_date = self._get_date_string(
             study["first_public_date"]
         )
-        study_db_metadata.release_date = self.get_date(study["releasedate"])
+        study_db_metadata.release_date = self._get_date_string(study["releasedate"])
         study_db_metadata.update_date = self._get_date_time_string(study["updatedate"])
         study_db_metadata.status_date = self._get_date_time_string(study["status_date"])
         study_db_metadata.submitters = self._create_submitters(submitters)
@@ -294,6 +296,7 @@ class DbMetadataCollector(AbstractDbMetadataCollector):
                 study_db_metadata.dataset_license_version.upper(),
             ),
         )
+
         study_db_metadata.study_category = StudyCategory(study["study_category"])
         study_db_metadata.mhd_model_version = study["mhd_model_version"]
         study_db_metadata.reserved_mhd_accession = study["mhd_accession"] or ""

{mtbls_mhd_integration-0.0.10 → mtbls_mhd_integration-0.0.11}/mtbls2mhd/v0_1/legacy/folder_metadata_collector.py

@@ -118,6 +118,8 @@ class LocalFolderMetadataCollector(AbstractFolderMetadataCollector):
         study_path,
         calculate_data_folder_size: bool = False,
         calculate_metadata_size: bool = False,
+        data_files_path: str = "FILES",
+        data_files_mapping_folder_name: None | str = None,
     ) -> Tuple[Union[None, StudyFolderMetadata], List[GenericMessage]]:
         messages: List[GenericMessage] = []
         study_folder_metadata = StudyFolderMetadata()

{mtbls_mhd_integration-0.0.10 → mtbls_mhd_integration-0.0.11/mtbls_mhd_integration.egg-info}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: mtbls-mhd-integration
-Version: 0.0.10
+Version: 0.0.11
 Summary: MetaboLights - MetabolomicsHub Integration
 Author-email: MetaboLights Team <metabolights-help@ebi.ac.uk>
 License-Expression: Apache-2.0

{mtbls_mhd_integration-0.0.10 → mtbls_mhd_integration-0.0.11}/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
 name = "mtbls-mhd-integration"
-version = "0.0.10"
+version = "0.0.11"
 description = "MetaboLights - MetabolomicsHub Integration"
 authors = [{"name" = "MetaboLights Team", "email" = "metabolights-help@ebi.ac.uk"}]
 license = "Apache-2.0"
@@ -50,7 +50,7 @@ exclude = ["tests*", "docs*"]
 [tool.commitizen]
 name = "cz_conventional_commits"
 version_provider = "uv"
-version = "0.0.103"
+version = "0.0.113"
 tag_format = "v$major.$minor.$patch"
 version_files = [
     "pyproject.toml:version",