msnoisedb 0.1.4__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
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+ # To get started with Dependabot version updates, you'll need to specify which
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+ # package ecosystems to update and where the package manifests are located.
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+ # Please see the documentation for all configuration options:
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+ # https://docs.github.com/code-security/dependabot/dependabot-version-updates/configuration-options-for-the-dependabot.yml-file
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+
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+ version: 2
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+ updates:
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+ - package-ecosystem: "github-actions"
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+ directory: "/" # Location of package manifests
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+ schedule:
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+ interval: "weekly"
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+ name: test
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+ channels:
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+ - conda-forge
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+ - defaults
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+ dependencies:
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+ - click
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+ - pymysql
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+ - postgresql
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+
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+
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+ name: Publish to PyPI
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+
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+ # Triggered on every published GitHub Release.
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+ #
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+ # Routing logic:
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+ # - ALL releases → TestPyPI (alphas, betas, RCs, final)
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+ # - Stable only → PyPI (tags matching vN.N.N exactly, e.g. v1.2.3)
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+ #
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+ # "Stable" is defined by the regex ^v[0-9]+\.[0-9]+\.[0-9]+$
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+ # Pre-releases (v1.0.0a1, v1.0.0rc2, v1.0.0.post1, …) go to TestPyPI only.
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+ #
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+ # No API tokens required — OIDC trusted publishing handles authentication.
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+ #
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+ # One-time setup (already done):
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+ # PyPI → Trusted Publisher: ROBelgium/msnoise-db, publish.yml, env=pypi
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+ # TestPyPI→ Trusted Publisher: ROBelgium/msnoise-db, publish.yml, env=testpypi
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+ # GitHub → Settings → Environments → "pypi" + "testpypi" created
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+
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+ on:
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+ release:
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+ types: [published]
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+
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+ permissions:
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+ contents: read
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+
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+ jobs:
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+ # ── 1. Build sdist + wheel ────────────────────────────────────────────────
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+ build:
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+ name: Build distribution packages
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+ runs-on: ubuntu-latest
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+
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+ outputs:
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+ is_stable: ${{ steps.check_tag.outputs.is_stable }}
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+
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+ steps:
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+ - name: Checkout source
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+ uses: actions/checkout@v4
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+ with:
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+ fetch-depth: 0 # setuptools-scm needs full history for version
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+
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+ - name: Set up Python
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+ uses: actions/setup-python@v5
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+ with:
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+ python-version: '3.12'
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+
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+ - name: Install build tooling
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+ run: python -m pip install --upgrade pip build twine
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+
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+ - name: Check whether this is a stable release tag (N.N.N)
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+ id: check_tag
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+ run: |
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+ TAG="${GITHUB_REF_NAME}"
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+ echo "Tag: $TAG"
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+ if [[ "$TAG" =~ ^[0-9]+\.[0-9]+\.[0-9]+$ ]]; then
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+ echo "is_stable=true" >> "$GITHUB_OUTPUT"
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+ echo "→ stable release, will publish to PyPI"
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+ else
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+ echo "is_stable=false" >> "$GITHUB_OUTPUT"
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+ echo "→ pre-release tag, TestPyPI only"
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+ fi
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+
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+ - name: Build sdist and wheel
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+ run: python -m build
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+
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+ - name: Check dist contents
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+ run: |
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+ twine check dist/*
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+ ls -lh dist/
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+
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+ - name: Upload dist as artifact
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+ uses: actions/upload-artifact@v4
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+ with:
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+ name: dist
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+ path: dist/
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+ if-no-files-found: error
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+
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+ # ── 2. Publish to TestPyPI (every release) ───────────────────────────────
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+ publish-testpypi:
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+ name: Publish to TestPyPI
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+ needs: build
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+ runs-on: ubuntu-latest
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+ environment:
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+ name: testpypi
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+ url: https://test.pypi.org/p/msnoisedb
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+
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+ permissions:
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+ id-token: write
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+
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+ steps:
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+ - name: Download dist artifact
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+ uses: actions/download-artifact@v4
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+ with:
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+ name: dist
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+ path: dist/
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+
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+ - name: Publish to TestPyPI
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+ uses: pypa/gh-action-pypi-publish@release/v1
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+ with:
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+ repository-url: https://test.pypi.org/legacy/
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+ print-hash: true
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+
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+ # ── 3. Publish to PyPI (stable releases only: vN.N.N) ────────────────────
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+ publish-pypi:
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+ name: Publish to PyPI
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+ needs: [build, publish-testpypi]
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+ if: needs.build.outputs.is_stable == 'true'
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+ runs-on: ubuntu-latest
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+ environment:
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+ name: pypi
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+ url: https://pypi.org/p/msnoisedb
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+
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+ permissions:
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+ id-token: write
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+
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+ steps:
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+ - name: Download dist artifact
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+ uses: actions/download-artifact@v4
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+ with:
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+ name: dist
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+ path: dist/
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+
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+ - name: Publish to PyPI
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+ uses: pypa/gh-action-pypi-publish@release/v1
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+ with:
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+ print-hash: true
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+ name: Test install - all OS
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+
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+ on:
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+ push:
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+ pull_request:
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+ schedule:
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+ - cron: '0 0 * * 1'
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+
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+ jobs:
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+ run_tests:
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+ runs-on: ${{ matrix.os }}
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+ if: |
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+ !contains(github.event.head_commit.message, '+ONLYDOCS') &&
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+ !contains(github.event.head_commit.message, '+NOFULLTEST')
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+ strategy:
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+ matrix:
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+ python-version: ['3.11', '3.12']
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+ os: [macos-latest, ubuntu-latest, windows-latest]
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+ include:
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+ - os: ubuntu-latest
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+ label: linux-64
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+ prefix: /usr/share/miniconda3/envs/test
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+
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+ fail-fast: false
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+ steps:
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+ - uses: actions/checkout@v4
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+ - name: Get current date
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+ id: date
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+ run: echo "::set-output name=date::$(date +'%Y-%m-%d')"
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+
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+ - uses: conda-incubator/setup-miniconda@v3.1.1
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+ with:
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+ activate-environment: test${{ matrix.python-version }}
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+ python-version: ${{ matrix.python-version }}
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+
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+ - uses: actions/cache@v5
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+ with:
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+ path: ${{ matrix.prefix }}${{ matrix.python-version }}
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+ key: ${{ matrix.label }}-conda-py${{ matrix.python-version }}-${{ hashFiles('.github/environment.yml') }}-${{ steps.date.outputs.date }}-${{ env.CACHE_NUMBER }}
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+ env:
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+ # Increase this value to reset cache if etc/example-environment.yml has not changed
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+ CACHE_NUMBER: 1
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+ id: cache
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+
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+ - name: Update environment
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+ run: conda env update -n test${{ matrix.python-version }} -f .github/environment.yml
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+ if: steps.cache.outputs.cache-hit != 'true'
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+
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+ - name: print package info
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+ shell: bash -l {0}
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+ run: |
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+ conda info -a
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+ conda list
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+
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+ - name: Install MSNoise-DB
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+ shell: bash -l {0}
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+ run: |
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+ pip install .
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+
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+ - name: Test suite
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+ shell: bash -l {0}
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+ run: |
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+ msnoisedb start
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+ msnoisedb create-db bubu
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+ msnoisedb list-db
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+ msnoisedb drop-db bubu
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+ msnoisedb stop
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+ # Build artifacts
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+ dist/
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+ build/
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+ *.egg-info/
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+
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+ # setuptools-scm generated version file (written at build time, not committed)
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+ msnoise_db/_version.py
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+
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+ # Old version tracking file (replaced by setuptools-scm)
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+ msnoise_db/RELEASE-VERSION
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+
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+ # Python
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+ __pycache__/
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+ *.py[cod]
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+ *.so
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+ .eggs/
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+
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+ # Environments
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+ .env
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+ .venv
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+ env/
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+ venv/
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+
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+ # IDE
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+ .vscode/
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+ .idea/
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+
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+ # postgres data dir (created by msnoisedb start)
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+ postgres_data/
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+ EUROPEAN UNION PUBLIC LICENCE v. 1.2
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+ EUPL © the European Union 2007, 2016
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+ This European Union Public Licence (the ‘EUPL’) applies to the Work (as defined
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+ Appendix
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+
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+ ‘Compatible Licences’ according to Article 5 EUPL are:
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+
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+ - GNU General Public License (GPL) v. 2, v. 3
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+ - GNU Affero General Public License (AGPL) v. 3
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+ - Open Software License (OSL) v. 2.1, v. 3.0
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+ - Eclipse Public License (EPL) v. 1.0
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+ - CeCILL v. 2.0, v. 2.1
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+ - Mozilla Public Licence (MPL) v. 2
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+ - GNU Lesser General Public Licence (LGPL) v. 2.1, v. 3
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+ - Creative Commons Attribution-ShareAlike v. 3.0 Unported (CC BY-SA 3.0) for
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+ works other than software
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+ - European Union Public Licence (EUPL) v. 1.1, v. 1.2
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+ - Québec Free and Open-Source Licence — Reciprocity (LiLiQ-R) or Strong
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+ Reciprocity (LiLiQ-R+).
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+
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+ The European Commission may update this Appendix to later versions of the above
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+ licences without producing a new version of the EUPL, as long as they provide
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+ the rights granted in Article 2 of this Licence and protect the covered Source
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+ Code from exclusive appropriation.
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+
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+ All other changes or additions to this Appendix require the production of a new
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+ EUPL version.
@@ -0,0 +1,155 @@
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+ Metadata-Version: 2.4
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+ Name: msnoisedb
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+ Version: 0.1.4
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+ Summary: The database minion for MSNoise — a self-contained, user-run PostgreSQL server
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+ Author-email: Thomas Lecocq & MSNoise dev team <Thomas.Lecocq@seismology.be>
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+ License: EUPL-1.1
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+ Project-URL: Homepage, http://www.msnoise.org
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+ Project-URL: Repository, https://github.com/ROBelgium/msnoise-db
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+ Project-URL: Bug Tracker, https://github.com/ROBelgium/msnoise-db/issues
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+ Keywords: noise,monitoring,seismic,velocity,change,dvv,dtt,cross-correlation,seismology,postgresql,database
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+ Classifier: Development Status :: 5 - Production/Stable
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+ Classifier: Environment :: Console
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+ Classifier: Intended Audience :: Science/Research
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+ Classifier: Intended Audience :: Developers
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+ Classifier: Operating System :: OS Independent
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+ Classifier: Programming Language :: Python
17
+ Classifier: Programming Language :: Python :: 3
18
+ Classifier: Programming Language :: Python :: 3.10
19
+ Classifier: Programming Language :: Python :: 3.11
20
+ Classifier: Programming Language :: Python :: 3.12
21
+ Classifier: Programming Language :: Python :: 3.13
22
+ Classifier: Topic :: Scientific/Engineering
23
+ Classifier: Topic :: Scientific/Engineering :: Physics
24
+ Requires-Python: >=3.10
25
+ Description-Content-Type: text/markdown
26
+ License-File: LICENSE.TXT
27
+ Requires-Dist: click
28
+ Dynamic: license-file
29
+
30
+ # MSNoise-DB CLI Tool
31
+
32
+ This is a Python-based command-line interface (CLI) tool for managing a portable postgresql server for MSNoise.
33
+
34
+ The tool allows you to install, start, stop, create, and drop databases.
35
+
36
+ [![Github Action Status](https://github.com/ROBelgium/msnoise-db/actions/workflows/test_linux.yml/badge.svg)](https://github.com/ROBelgium/msnoise-db/actions)
37
+
38
+
39
+ ## Features
40
+
41
+ - Setup PostgreSQL.
42
+ - Start PostgreSQL server in the background (custom port by default 5099, configurable)
43
+ - Stop PostgreSQL server.
44
+ - Create a new database.
45
+ - Drop an existing database.
46
+
47
+ ## Prerequisites
48
+
49
+ - Python 3.11 or above.
50
+ - `click` package: Install using `conda install -c conda-forge click`.
51
+ - `postgresql` package: Install using `conda install -c conda-forge postgresql`.
52
+
53
+ ## Installation
54
+
55
+ 1. Install the code
56
+
57
+ ```sh
58
+ pip install git+https://github.com/ROBelgium/msnoise-db
59
+ ```
60
+
61
+ if your console doesn't have git, you can access the zip directly:
62
+
63
+ ```sh
64
+ pip install https://github.com/ROBelgium/msnoise-db/archive.master.zip
65
+ ```
66
+
67
+
68
+ 3. Create a new folder to store the database data
69
+
70
+
71
+ ## Usage
72
+
73
+ ### Start a PostgreSQL Server (and set up if not existing)
74
+
75
+ Start the PostgreSQL server in the background.
76
+
77
+ ```sh
78
+ msnoisedb start
79
+ ```
80
+
81
+ ### Stop PostgreSQL Server
82
+
83
+ Stop the running PostgreSQL server.
84
+
85
+ ```sh
86
+ msnoisedb stop
87
+ ```
88
+
89
+ ### Create a New Database
90
+
91
+ Create a new database.
92
+
93
+ ```sh
94
+ msnoisedb create-db DATABASE_NAME
95
+ ```
96
+
97
+ ### Drop an Existing Database
98
+
99
+ Drop an existing database.
100
+
101
+ ```sh
102
+ msnoisedb drop-db DATABASE_NAME
103
+ ```
104
+
105
+ ### List databases
106
+
107
+ Drop an existing database.
108
+
109
+ ```sh
110
+ msnoisedb list-db
111
+ ```
112
+
113
+ ## Configuring an MSNoise project
114
+
115
+ Create a new project database
116
+
117
+ ```sh
118
+ msnoisedb create-db test_database
119
+ ```
120
+
121
+ Initialise the db in msnoise:
122
+
123
+ ```sh
124
+ msnoise db init
125
+ ```
126
+
127
+ ```sh
128
+ Launching the init
129
+ Welcome to MSNoise
130
+
131
+ What database technology do you want to use?
132
+ [1] sqlite
133
+ [2] mysql
134
+ [3] postgresql
135
+ Choice: 3
136
+ Server: [localhost]: localhost:5099
137
+ Database: [msnoise]: test_database
138
+ Username: [msnoise]: msnoise
139
+ Password (not shown as you type): msnoise
140
+ Table prefix: []:
141
+ Installation Done! - Go to Configuration Step!
142
+ ```
143
+
144
+
145
+ ## Notes
146
+
147
+ - **Supported Platforms**: The tool is designed to work on Windows, Linux and MacOS platforms.
148
+
149
+ ## License
150
+
151
+ This project is licensed under the EUPL License. See the [LICENSE](LICENSE.TXT) file for more details.
152
+
153
+ ## Acknowledgements
154
+
155
+ - [Click](https://palletsprojects.com/p/click/) for creating powerful command-line interfaces.
@@ -0,0 +1,126 @@
1
+ # MSNoise-DB CLI Tool
2
+
3
+ This is a Python-based command-line interface (CLI) tool for managing a portable postgresql server for MSNoise.
4
+
5
+ The tool allows you to install, start, stop, create, and drop databases.
6
+
7
+ [![Github Action Status](https://github.com/ROBelgium/msnoise-db/actions/workflows/test_linux.yml/badge.svg)](https://github.com/ROBelgium/msnoise-db/actions)
8
+
9
+
10
+ ## Features
11
+
12
+ - Setup PostgreSQL.
13
+ - Start PostgreSQL server in the background (custom port by default 5099, configurable)
14
+ - Stop PostgreSQL server.
15
+ - Create a new database.
16
+ - Drop an existing database.
17
+
18
+ ## Prerequisites
19
+
20
+ - Python 3.11 or above.
21
+ - `click` package: Install using `conda install -c conda-forge click`.
22
+ - `postgresql` package: Install using `conda install -c conda-forge postgresql`.
23
+
24
+ ## Installation
25
+
26
+ 1. Install the code
27
+
28
+ ```sh
29
+ pip install git+https://github.com/ROBelgium/msnoise-db
30
+ ```
31
+
32
+ if your console doesn't have git, you can access the zip directly:
33
+
34
+ ```sh
35
+ pip install https://github.com/ROBelgium/msnoise-db/archive.master.zip
36
+ ```
37
+
38
+
39
+ 3. Create a new folder to store the database data
40
+
41
+
42
+ ## Usage
43
+
44
+ ### Start a PostgreSQL Server (and set up if not existing)
45
+
46
+ Start the PostgreSQL server in the background.
47
+
48
+ ```sh
49
+ msnoisedb start
50
+ ```
51
+
52
+ ### Stop PostgreSQL Server
53
+
54
+ Stop the running PostgreSQL server.
55
+
56
+ ```sh
57
+ msnoisedb stop
58
+ ```
59
+
60
+ ### Create a New Database
61
+
62
+ Create a new database.
63
+
64
+ ```sh
65
+ msnoisedb create-db DATABASE_NAME
66
+ ```
67
+
68
+ ### Drop an Existing Database
69
+
70
+ Drop an existing database.
71
+
72
+ ```sh
73
+ msnoisedb drop-db DATABASE_NAME
74
+ ```
75
+
76
+ ### List databases
77
+
78
+ Drop an existing database.
79
+
80
+ ```sh
81
+ msnoisedb list-db
82
+ ```
83
+
84
+ ## Configuring an MSNoise project
85
+
86
+ Create a new project database
87
+
88
+ ```sh
89
+ msnoisedb create-db test_database
90
+ ```
91
+
92
+ Initialise the db in msnoise:
93
+
94
+ ```sh
95
+ msnoise db init
96
+ ```
97
+
98
+ ```sh
99
+ Launching the init
100
+ Welcome to MSNoise
101
+
102
+ What database technology do you want to use?
103
+ [1] sqlite
104
+ [2] mysql
105
+ [3] postgresql
106
+ Choice: 3
107
+ Server: [localhost]: localhost:5099
108
+ Database: [msnoise]: test_database
109
+ Username: [msnoise]: msnoise
110
+ Password (not shown as you type): msnoise
111
+ Table prefix: []:
112
+ Installation Done! - Go to Configuration Step!
113
+ ```
114
+
115
+
116
+ ## Notes
117
+
118
+ - **Supported Platforms**: The tool is designed to work on Windows, Linux and MacOS platforms.
119
+
120
+ ## License
121
+
122
+ This project is licensed under the EUPL License. See the [LICENSE](LICENSE.TXT) file for more details.
123
+
124
+ ## Acknowledgements
125
+
126
+ - [Click](https://palletsprojects.com/p/click/) for creating powerful command-line interfaces.
@@ -0,0 +1,7 @@
1
+ from importlib.metadata import version, PackageNotFoundError
2
+
3
+ try:
4
+ __version__ = version("msnoise-db")
5
+ except PackageNotFoundError:
6
+ # Package not installed (e.g. running from source without pip install -e .)
7
+ __version__ = "unknown"
@@ -0,0 +1,24 @@
1
+ # file generated by vcs-versioning
2
+ # don't change, don't track in version control
3
+ from __future__ import annotations
4
+
5
+ __all__ = [
6
+ "__version__",
7
+ "__version_tuple__",
8
+ "version",
9
+ "version_tuple",
10
+ "__commit_id__",
11
+ "commit_id",
12
+ ]
13
+
14
+ version: str
15
+ __version__: str
16
+ __version_tuple__: tuple[int | str, ...]
17
+ version_tuple: tuple[int | str, ...]
18
+ commit_id: str | None
19
+ __commit_id__: str | None
20
+
21
+ __version__ = version = '0.1.4'
22
+ __version_tuple__ = version_tuple = (0, 1, 4)
23
+
24
+ __commit_id__ = commit_id = 'gbf2f8b430'
@@ -0,0 +1,274 @@
1
+ #!/usr/bin/env python3
2
+ import click
3
+ import os
4
+ import subprocess
5
+ import sys
6
+ import time
7
+ from pathlib import Path
8
+
9
+
10
+ class PostgresManager:
11
+ def __init__(self, data_dir=None, port=5099, host='localhost'):
12
+ self.data_dir = data_dir and Path(data_dir) or Path.cwd() / 'postgres_data'
13
+ self.port = port
14
+ self.host = host
15
+ self.data_dir.parent.mkdir(parents=True, exist_ok=True)
16
+
17
+ def init_db(self):
18
+ """Initialize PostgreSQL data directory if it doesn't exist."""
19
+ if not (self.data_dir / 'PG_VERSION').exists():
20
+ click.echo(f"Initializing PostgreSQL data directory at {self.data_dir}")
21
+ subprocess.run(['initdb', '-D', str(self.data_dir)], check=True)
22
+
23
+ # Modify pg_hba.conf to allow password authentication
24
+ hba_path = self.data_dir / 'pg_hba.conf'
25
+ with open(hba_path, 'a') as f:
26
+ f.write("\n# MSNoise user authentication\n")
27
+ f.write("host all msnoise 127.0.0.1/32 md5\n")
28
+ f.write("host all msnoise ::1/128 md5\n")
29
+ f.write("host all msnoise localhost md5\n")
30
+ # Configure postgresql.conf for high number of connections
31
+ conf_path = self.data_dir / 'postgresql.conf'
32
+ click.echo("Configuring postgresql.conf for 1000 connections")
33
+ with open(conf_path, 'a') as f:
34
+ f.write("\n# MSNoise custom settings\n")
35
+ f.write("max_connections = 1000\n")
36
+ f.write("shared_buffers = 256MB\n") # Increased for many connections
37
+ f.write("listen_addresses = '*'\n") # Listen on all interfaces
38
+
39
+ def create_msnoise_user(self):
40
+ """Create msnoise user with password if it doesn't exist."""
41
+ try:
42
+ # Create a temporary script to create user
43
+ create_user_sql = """
44
+ DO
45
+ $do$
46
+ BEGIN
47
+ IF NOT EXISTS (SELECT FROM pg_catalog.pg_roles WHERE rolname = 'msnoise') THEN
48
+ CREATE USER msnoise WITH PASSWORD 'msnoise';
49
+ END IF;
50
+ END
51
+ $do$;
52
+ ALTER USER msnoise CREATEDB;
53
+ """
54
+
55
+ # Use psql to execute the SQL
56
+ process = subprocess.Popen(
57
+ ['psql', '-p', str(self.port), '-h', self.host, 'postgres'],
58
+ stdin=subprocess.PIPE,
59
+ stdout=subprocess.PIPE,
60
+ stderr=subprocess.PIPE
61
+ )
62
+ process.communicate(input=create_user_sql.encode())
63
+
64
+ if process.returncode == 0:
65
+ click.echo("MSNoise user created/verified successfully")
66
+ else:
67
+ click.echo("Failed to create MSNoise user", err=True)
68
+
69
+ except subprocess.CalledProcessError as e:
70
+ click.echo(f"Failed to create MSNoise user: {e}", err=True)
71
+ sys.exit(1)
72
+
73
+ def start_server(self):
74
+ """Start PostgreSQL server."""
75
+ if self.is_server_running():
76
+ click.echo(f"PostgreSQL server is already running on port {self.port}")
77
+ return
78
+
79
+ self.init_db()
80
+
81
+ cmd = [
82
+ 'pg_ctl', 'start',
83
+ '-D', str(self.data_dir),
84
+ '-o', f'-p {self.port} -h {self.host}',
85
+ '-l', str(self.data_dir / 'postgres.log')
86
+ ]
87
+
88
+ try:
89
+ subprocess.run(cmd, check=True)
90
+ time.sleep(2) # Wait for server to start
91
+ click.echo(f"PostgreSQL server started on {self.host}:{self.port}")
92
+
93
+ # Create msnoise user after server starts
94
+ self.create_msnoise_user()
95
+
96
+ except subprocess.CalledProcessError as e:
97
+ click.echo(f"Failed to start PostgreSQL server: {e}", err=True)
98
+ sys.exit(1)
99
+
100
+ def stop_server(self):
101
+ """Stop PostgreSQL server."""
102
+ if not self.is_server_running():
103
+ click.echo("PostgreSQL server is not running")
104
+ return
105
+
106
+ cmd = ['pg_ctl', 'stop', '-D', str(self.data_dir)]
107
+ try:
108
+ subprocess.run(cmd, check=True)
109
+ click.echo("PostgreSQL server stopped")
110
+ except subprocess.CalledProcessError as e:
111
+ click.echo(f"Failed to stop PostgreSQL server: {e}", err=True)
112
+ sys.exit(1)
113
+
114
+ def create_database(self, db_name):
115
+ """Create a new database."""
116
+ if not self.is_server_running():
117
+ click.echo("PostgreSQL server is not running. Please start it first.", err=True)
118
+ return
119
+
120
+ try:
121
+ # Create database owned by msnoise user
122
+ subprocess.run([
123
+ 'createdb',
124
+ '-p', str(self.port),
125
+ '-h', self.host,
126
+ '-O', 'msnoise',
127
+ db_name
128
+ ], check=True)
129
+ click.echo(f"Database '{db_name}' created successfully (owned by msnoise)")
130
+ except subprocess.CalledProcessError as e:
131
+ click.echo(f"Failed to create database: {e}", err=True)
132
+ sys.exit(1)
133
+
134
+ def drop_database(self, db_name):
135
+ """Drop an existing database."""
136
+ if not self.is_server_running():
137
+ click.echo("PostgreSQL server is not running. Please start it first.", err=True)
138
+ return
139
+
140
+ try:
141
+ subprocess.run([
142
+ 'dropdb',
143
+ '-p', str(self.port),
144
+ '-h', self.host,
145
+ db_name
146
+ ], check=True)
147
+ click.echo(f"Database '{db_name}' dropped successfully")
148
+ except subprocess.CalledProcessError as e:
149
+ click.echo(f"Failed to drop database: {e}", err=True)
150
+ sys.exit(1)
151
+
152
+ def list_databases(self):
153
+ """List all databases."""
154
+ if not self.is_server_running():
155
+ click.echo("PostgreSQL server is not running. Please start it first.", err=True)
156
+ return
157
+
158
+ try:
159
+ result = subprocess.run(
160
+ ['psql', '-p', str(self.port), '-h', self.host,
161
+ '-U', 'msnoise', '-l', ],
162
+ check=True,
163
+ capture_output=True,
164
+ text=True,
165
+ env={**os.environ, 'PGPASSWORD': 'msnoise'}
166
+ )
167
+ click.echo("Available databases:")
168
+ click.echo(result.stdout)
169
+ except subprocess.CalledProcessError as e:
170
+ click.echo(f"Failed to list databases: {e}", err=True)
171
+ if e.stderr:
172
+ click.echo(e.stderr, err=True)
173
+ sys.exit(1)
174
+
175
+ def is_server_running(self):
176
+ """Check if PostgreSQL server is running."""
177
+ try:
178
+ subprocess.run(
179
+ ['pg_ctl', 'status', '-D', str(self.data_dir)],
180
+ check=True,
181
+ capture_output=True
182
+ )
183
+ return True
184
+ except subprocess.CalledProcessError:
185
+ return False
186
+
187
+
188
+ # Shared options for all commands
189
+ def common_options(f):
190
+ f = click.option('--port', default=5099, help='Port number (default: 5099)')(f)
191
+ f = click.option('--host', default='localhost', help='Listen address (default: localhost)')(f)
192
+ f = click.option('--data-dir', type=click.Path(), help='Custom data directory path')(f)
193
+ return f
194
+
195
+
196
+ @click.group()
197
+ def cli():
198
+ """PostgreSQL Server Management CLI for MSNoise
199
+
200
+ This CLI tool manages a PostgreSQL server instance configured for MSNoise,
201
+ with automatic user creation (msnoise:msnoise) and appropriate permissions.
202
+ """
203
+ pass
204
+
205
+
206
+ @cli.command()
207
+ @common_options
208
+ def start(port, host, data_dir):
209
+ """Start PostgreSQL server with MSNoise user configuration"""
210
+ pg_manager = PostgresManager(
211
+ data_dir=data_dir and Path(data_dir),
212
+ port=port,
213
+ host=host
214
+ )
215
+ pg_manager.start_server()
216
+
217
+
218
+ @cli.command()
219
+ @common_options
220
+ def stop(port, host, data_dir):
221
+ """Stop PostgreSQL server"""
222
+ pg_manager = PostgresManager(
223
+ data_dir=data_dir and Path(data_dir),
224
+ port=port,
225
+ host=host
226
+ )
227
+ pg_manager.stop_server()
228
+
229
+
230
+ @cli.command()
231
+ @click.argument('db_name')
232
+ @common_options
233
+ def create_db(db_name, port, host, data_dir):
234
+ """Create a new database owned by msnoise user"""
235
+ pg_manager = PostgresManager(
236
+ data_dir=data_dir and Path(data_dir),
237
+ port=port,
238
+ host=host
239
+ )
240
+ pg_manager.create_database(db_name)
241
+
242
+
243
+ @cli.command()
244
+ @common_options
245
+ def list_db(port, host, data_dir):
246
+ """List all databases"""
247
+ pg_manager = PostgresManager(
248
+ data_dir=data_dir and Path(data_dir),
249
+ port=port,
250
+ host=host
251
+ )
252
+ pg_manager.list_databases()
253
+
254
+
255
+ @cli.command()
256
+ @click.argument('db_name')
257
+ @common_options
258
+ def drop_db(db_name, port, host, data_dir):
259
+ """Drop an existing database"""
260
+ pg_manager = PostgresManager(
261
+ data_dir=data_dir and Path(data_dir),
262
+ port=port,
263
+ host=host
264
+ )
265
+ pg_manager.drop_database(db_name)
266
+
267
+
268
+
269
+ def run():
270
+ cli(obj={})
271
+
272
+
273
+ if __name__ == '__main__':
274
+ run()
@@ -0,0 +1,155 @@
1
+ Metadata-Version: 2.4
2
+ Name: msnoisedb
3
+ Version: 0.1.4
4
+ Summary: The database minion for MSNoise — a self-contained, user-run PostgreSQL server
5
+ Author-email: Thomas Lecocq & MSNoise dev team <Thomas.Lecocq@seismology.be>
6
+ License: EUPL-1.1
7
+ Project-URL: Homepage, http://www.msnoise.org
8
+ Project-URL: Repository, https://github.com/ROBelgium/msnoise-db
9
+ Project-URL: Bug Tracker, https://github.com/ROBelgium/msnoise-db/issues
10
+ Keywords: noise,monitoring,seismic,velocity,change,dvv,dtt,cross-correlation,seismology,postgresql,database
11
+ Classifier: Development Status :: 5 - Production/Stable
12
+ Classifier: Environment :: Console
13
+ Classifier: Intended Audience :: Science/Research
14
+ Classifier: Intended Audience :: Developers
15
+ Classifier: Operating System :: OS Independent
16
+ Classifier: Programming Language :: Python
17
+ Classifier: Programming Language :: Python :: 3
18
+ Classifier: Programming Language :: Python :: 3.10
19
+ Classifier: Programming Language :: Python :: 3.11
20
+ Classifier: Programming Language :: Python :: 3.12
21
+ Classifier: Programming Language :: Python :: 3.13
22
+ Classifier: Topic :: Scientific/Engineering
23
+ Classifier: Topic :: Scientific/Engineering :: Physics
24
+ Requires-Python: >=3.10
25
+ Description-Content-Type: text/markdown
26
+ License-File: LICENSE.TXT
27
+ Requires-Dist: click
28
+ Dynamic: license-file
29
+
30
+ # MSNoise-DB CLI Tool
31
+
32
+ This is a Python-based command-line interface (CLI) tool for managing a portable postgresql server for MSNoise.
33
+
34
+ The tool allows you to install, start, stop, create, and drop databases.
35
+
36
+ [![Github Action Status](https://github.com/ROBelgium/msnoise-db/actions/workflows/test_linux.yml/badge.svg)](https://github.com/ROBelgium/msnoise-db/actions)
37
+
38
+
39
+ ## Features
40
+
41
+ - Setup PostgreSQL.
42
+ - Start PostgreSQL server in the background (custom port by default 5099, configurable)
43
+ - Stop PostgreSQL server.
44
+ - Create a new database.
45
+ - Drop an existing database.
46
+
47
+ ## Prerequisites
48
+
49
+ - Python 3.11 or above.
50
+ - `click` package: Install using `conda install -c conda-forge click`.
51
+ - `postgresql` package: Install using `conda install -c conda-forge postgresql`.
52
+
53
+ ## Installation
54
+
55
+ 1. Install the code
56
+
57
+ ```sh
58
+ pip install git+https://github.com/ROBelgium/msnoise-db
59
+ ```
60
+
61
+ if your console doesn't have git, you can access the zip directly:
62
+
63
+ ```sh
64
+ pip install https://github.com/ROBelgium/msnoise-db/archive.master.zip
65
+ ```
66
+
67
+
68
+ 3. Create a new folder to store the database data
69
+
70
+
71
+ ## Usage
72
+
73
+ ### Start a PostgreSQL Server (and set up if not existing)
74
+
75
+ Start the PostgreSQL server in the background.
76
+
77
+ ```sh
78
+ msnoisedb start
79
+ ```
80
+
81
+ ### Stop PostgreSQL Server
82
+
83
+ Stop the running PostgreSQL server.
84
+
85
+ ```sh
86
+ msnoisedb stop
87
+ ```
88
+
89
+ ### Create a New Database
90
+
91
+ Create a new database.
92
+
93
+ ```sh
94
+ msnoisedb create-db DATABASE_NAME
95
+ ```
96
+
97
+ ### Drop an Existing Database
98
+
99
+ Drop an existing database.
100
+
101
+ ```sh
102
+ msnoisedb drop-db DATABASE_NAME
103
+ ```
104
+
105
+ ### List databases
106
+
107
+ Drop an existing database.
108
+
109
+ ```sh
110
+ msnoisedb list-db
111
+ ```
112
+
113
+ ## Configuring an MSNoise project
114
+
115
+ Create a new project database
116
+
117
+ ```sh
118
+ msnoisedb create-db test_database
119
+ ```
120
+
121
+ Initialise the db in msnoise:
122
+
123
+ ```sh
124
+ msnoise db init
125
+ ```
126
+
127
+ ```sh
128
+ Launching the init
129
+ Welcome to MSNoise
130
+
131
+ What database technology do you want to use?
132
+ [1] sqlite
133
+ [2] mysql
134
+ [3] postgresql
135
+ Choice: 3
136
+ Server: [localhost]: localhost:5099
137
+ Database: [msnoise]: test_database
138
+ Username: [msnoise]: msnoise
139
+ Password (not shown as you type): msnoise
140
+ Table prefix: []:
141
+ Installation Done! - Go to Configuration Step!
142
+ ```
143
+
144
+
145
+ ## Notes
146
+
147
+ - **Supported Platforms**: The tool is designed to work on Windows, Linux and MacOS platforms.
148
+
149
+ ## License
150
+
151
+ This project is licensed under the EUPL License. See the [LICENSE](LICENSE.TXT) file for more details.
152
+
153
+ ## Acknowledgements
154
+
155
+ - [Click](https://palletsprojects.com/p/click/) for creating powerful command-line interfaces.
@@ -0,0 +1,17 @@
1
+ .gitignore
2
+ LICENSE.TXT
3
+ README.md
4
+ pyproject.toml
5
+ .github/dependabot.yml
6
+ .github/environment.yml
7
+ .github/workflows/publish.yml
8
+ .github/workflows/test_linux.yml
9
+ msnoise_db/__init__.py
10
+ msnoise_db/_version.py
11
+ msnoise_db/cli.py
12
+ msnoisedb.egg-info/PKG-INFO
13
+ msnoisedb.egg-info/SOURCES.txt
14
+ msnoisedb.egg-info/dependency_links.txt
15
+ msnoisedb.egg-info/entry_points.txt
16
+ msnoisedb.egg-info/requires.txt
17
+ msnoisedb.egg-info/top_level.txt
@@ -0,0 +1,2 @@
1
+ [console_scripts]
2
+ msnoisedb = msnoise_db.cli:run
@@ -0,0 +1 @@
1
+ click
@@ -0,0 +1 @@
1
+ msnoise_db
@@ -0,0 +1,55 @@
1
+ [build-system]
2
+ requires = ["setuptools>=64", "setuptools-scm>=8"]
3
+ build-backend = "setuptools.build_meta"
4
+
5
+ [project]
6
+ name = "msnoisedb"
7
+ dynamic = ["version"]
8
+ description = "The database minion for MSNoise — a self-contained, user-run PostgreSQL server"
9
+ readme = "README.md"
10
+ license = { text = "EUPL-1.1" }
11
+ authors = [
12
+ { name = "Thomas Lecocq & MSNoise dev team", email = "Thomas.Lecocq@seismology.be" }
13
+ ]
14
+ requires-python = ">=3.10"
15
+ keywords = [
16
+ "noise", "monitoring", "seismic", "velocity", "change",
17
+ "dvv", "dtt", "cross-correlation", "seismology", "postgresql", "database"
18
+ ]
19
+ classifiers = [
20
+ "Development Status :: 5 - Production/Stable",
21
+ "Environment :: Console",
22
+ "Intended Audience :: Science/Research",
23
+ "Intended Audience :: Developers",
24
+ "Operating System :: OS Independent",
25
+ "Programming Language :: Python",
26
+ "Programming Language :: Python :: 3",
27
+ "Programming Language :: Python :: 3.10",
28
+ "Programming Language :: Python :: 3.11",
29
+ "Programming Language :: Python :: 3.12",
30
+ "Programming Language :: Python :: 3.13",
31
+ "Topic :: Scientific/Engineering",
32
+ "Topic :: Scientific/Engineering :: Physics",
33
+ ]
34
+ dependencies = [
35
+ "click",
36
+ ]
37
+
38
+ [project.urls]
39
+ Homepage = "http://www.msnoise.org"
40
+ Repository = "https://github.com/ROBelgium/msnoise-db"
41
+ "Bug Tracker" = "https://github.com/ROBelgium/msnoise-db/issues"
42
+
43
+ [project.scripts]
44
+ msnoisedb = "msnoise_db.cli:run"
45
+
46
+ [tool.setuptools.packages.find]
47
+ where = ["."]
48
+ include = ["msnoise_db*"]
49
+
50
+ [tool.setuptools_scm]
51
+ # Writes the version into msnoise_db/_version.py at build time.
52
+ # The installed package reads it from there via importlib.metadata.
53
+ write_to = "msnoise_db/_version.py"
54
+ version_scheme = "guess-next-dev"
55
+ local_scheme = "no-local-version" # keeps TestPyPI uploads clean (no +local suffix)
@@ -0,0 +1,4 @@
1
+ [egg_info]
2
+ tag_build =
3
+ tag_date = 0
4
+