mrio-toolbox 1.1.1__tar.gz → 1.1.3__tar.gz

{mrio_toolbox-1.1.1 → mrio_toolbox-1.1.3}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: mrio_toolbox
-Version: 1.1.1
+Version: 1.1.3
 Summary: Basic manipulation of Multi-Regional Input-Output tables.
 Author-email: Timothe Beaufils <timothe.beaufils@pik-potsdam.de>, Florian Wirth <florian.wirth@pik-potsdam.de>
 License-Expression: GPL-3.0-or-later
@@ -29,4 +29,4 @@ Python package to handle Multi-Regional Input-Output tables in Python
 
 mrio_toolbox is designed to manipulate MRIO table with a high level of flexibility
 
-Check out the example directory for an hands-in demo of the package.
+The documentation is available at https://tbeaufils.codeberg.page/.

{mrio_toolbox-1.1.1 → mrio_toolbox-1.1.3}/README.md

@@ -6,4 +6,4 @@ Python package to handle Multi-Regional Input-Output tables in Python
 
 mrio_toolbox is designed to manipulate MRIO table with a high level of flexibility
 
-Check out the example directory for an hands-in demo of the package.
+The documentation is available at https://tbeaufils.codeberg.page/.

{mrio_toolbox-1.1.1 → mrio_toolbox-1.1.3}/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "mrio_toolbox"
-version = "1.1.1"
+version = "1.1.3"
 authors = [
     { name="Timothe Beaufils", email="timothe.beaufils@pik-potsdam.de" },
     { name="Florian Wirth", email="florian.wirth@pik-potsdam.de"}

{mrio_toolbox-1.1.1 → mrio_toolbox-1.1.3/src}/mrio_toolbox.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: mrio_toolbox
-Version: 1.1.1
+Version: 1.1.3
 Summary: Basic manipulation of Multi-Regional Input-Output tables.
 Author-email: Timothe Beaufils <timothe.beaufils@pik-potsdam.de>, Florian Wirth <florian.wirth@pik-potsdam.de>
 License-Expression: GPL-3.0-or-later
@@ -29,4 +29,4 @@ Python package to handle Multi-Regional Input-Output tables in Python
 
 mrio_toolbox is designed to manipulate MRIO table with a high level of flexibility
 
-Check out the example directory for an hands-in demo of the package.
+The documentation is available at https://tbeaufils.codeberg.page/.

mrio_toolbox-1.1.3/src/mrio_toolbox.egg-info/SOURCES.txt

@@ -0,0 +1,8 @@
+LICENSE
+README.md
+pyproject.toml
+src/mrio_toolbox.egg-info/PKG-INFO
+src/mrio_toolbox.egg-info/SOURCES.txt
+src/mrio_toolbox.egg-info/dependency_links.txt
+src/mrio_toolbox.egg-info/requires.txt
+src/mrio_toolbox.egg-info/top_level.txt

mrio_toolbox-1.1.1/mrio_toolbox/__init__.py

@@ -1,21 +0,0 @@
-"""
-The MRIO toolbox module provides several submodules with different functionalities: 
-
-- `mrio_toolbox.mrio`: Contains the MRIO class for handling multi-regional input-output data.
-- `mrio_toolbox._parts`: Contains the Part and Axe classes for managing parts of MRIO data.
-- `mrio_toolbox.extractors`: Provides functions to extract raw MRIO data.
-- 'mrio_toolbox._msm': Contains the multi-scale mapping algorithm for mapping PRIMAP data into an MRIO
-- `mrio_toolbox._utils`: Contains utility functions for MRIO loading, saving and converting MRIO data to different formats.
-
-"""
-
-from mrio_toolbox.mrio import MRIO
-from mrio_toolbox._parts._Part import Part,load_part
-from mrio_toolbox.extractors import extract_MRIO
-from mrio_toolbox.extractors import download_MRIO
-
-__all__ = ["MRIO",
-           "load_part",
-           "Part",
-           "extract_MRIO",
-           "download_MRIO"]

mrio_toolbox-1.1.1/mrio_toolbox/_parts/_Axe.py

@@ -1,539 +0,0 @@
-# -*- coding: utf-8 -*-
-"""
-Definition of Part Axes
-"""
-
-import logging
-import itertools
-import pandas as pd
-import numpy as np
-from copy import deepcopy
-
-log = logging.getLogger(__name__)
-class Axe:
-    """
-    Representation of an Axe object.
-
-    An Axe holds the labels and dimensions for an MRIO Part. Axes are used 
-    to slice MRIO Parts based on labels or indices and support multi-level 
-    indexing and groupings.
-
-    Instance variables
-    ------------------
-    labels : dict
-        Dictionary of labels for each level of the Axe.
-    levels : int
-        Number of levels in the Axe.
-    dims : list of int
-        Number of labels for each level.
-    dimensions : list of str
-        Keys of the labels dictionary, representing the dimensions of the Axe.
-    groupings : dict
-        Groupings of the labels for each level of the Axe.
-    mappings : dict
-        Mappings used to convert grouping labels into indices.
-    multipliers : dict
-        Multipliers used to convert labels into indices.
-    name : str
-        Name of the Axe.
-
-    Methods
-    -------
-    set_labels(labels):
-        Set the labels of the Axe.
-    update_multipliers():
-        Update the multipliers used to convert labels into indices.
-    squeeze():
-        Remove levels with only one label.
-    swap_levels(level1, level2):
-        Swap the positions of two levels in the Axe.
-    label(as_index=False):
-        Generate the labels for the full axis.
-    isin(arg, level):
-        Check whether an element is in the labels of a given level.
-    derive_mappings(groupings=None):
-        Update the mappings of the Axe based on the groupings.
-    update_groupings(groupings=None):
-        Update the groupings of the Axe.
-    get(args, labels=False):
-        Get the indices corresponding to a selection on the Axe.
-    rename_labels(old, new):
-        Rename labels in the Axe.
-    replace_labels(name, labels):
-        Replace a given label in the Axe.
-    has_dim(dim):
-        Check whether a given dimension is in the Axe.
-    __getitem__(*args):
-        Indexing is passed to the `get` method.
-    __eq__(other):
-        Check equality between two Axe objects.
-    __len__():
-        Get the full label length of the Axe.
-    """    
-    
-    def __init__(self,labels,groupings=None,
-                 name=None):
-        """
-        Initialize an Axe object.
-
-        Parameters
-        ----------
-        labels : dict or list of list of str
-            Dictionary of labels for each level of the Axe. If a list of lists 
-            is passed, levels are set to 0, 1, 2, etc.
-        groupings : dict, optional
-            Dictionary of groupings for each level of the Axe. Groupings define 
-            how labels are grouped into larger categories (e.g., countries into zones).
-            If not provided, groupings are set to the identity.
-        name : str, optional
-            Name of the Axe. If not provided, a name is generated automatically 
-            based on the dimensions.
-
-        Raises
-        ------
-        TypeError
-            If the provided labels are not a dictionary or a list of lists.
-
-        Notes
-        -----
-        The `labels` parameter defines the structure of the Axe, while the 
-        `groupings` parameter allows grouping labels into higher-level categories.
-        """
-        if isinstance(labels,dict):
-            self.labels = labels
-        elif isinstance(labels,list):
-            if isinstance(labels[0],dict):
-                self.labels = dict()
-                for label in labels:
-                    self.labels.update(label)
-            elif not isinstance(labels[0],list):
-                self.labels = {str(0):labels}
-            else:
-                self.labels = {str(i):labels[i] for i in range(len(labels))}
-        else:
-            raise TypeError("Labels must be a list or a dict. Input is of type "+str(type(labels)))
-        self.levels = len(self.labels)
-        self.dims = [len(dim) for dim in self.labels.values()]
-        self.dimensions = [
-            str(dim) for dim in self.labels.keys()
-        ] #Dimensions of the Axe
-        #Dimensions also save the order of the levels
-        self.ndim = len(self.dims)
-        self.update_multipliers()
-        if groupings is None:
-            self.groupings = {i:{} for i in self.dimensions}
-        else:
-            self.groupings = groupings
-        self.mappings = dict()
-        self.derive_mappings(groupings)
-        if name is None:
-            if len(self.dimensions)>1:
-                self.name = "_".join(self.dimensions)
-            self.name = self.dimensions[0]
-        else:
-            self.name = name
-
-    def set_labels(self,labels):
-        """Set the labels of the Axe
-        
-        Parameters
-        ----------
-        labels : dict or list of list of str
-            Dict of labels for each level of the Axe.
-            The levels are interpreted in the order of the keys.
-            If a list of list of str is passed, levels are set to 0,1,2...
-        """
-        if isinstance(labels,dict):
-            self.labels = labels
-        elif isinstance(labels,list):
-            if not isinstance(labels[0],list):
-                self.labels = {str(0):labels}
-            else:
-                self.labels = {str(i):labels[i] for i in range(len(labels))}
-        else:
-            raise TypeError("Labels must be a list or a dict. Input is of type "+str(type(labels)))
-        self.levels = len(self.labels)
-        self.dims = [len(dim) for dim in self.labels.values()]
-        self.dimensions = list(self.labels.keys())
-        self.ndim = len(self.dims)
-
-    def update_multipliers(self):
-        """
-        Update the multipliers used to convert labels into indices
-        """
-        multipliers = []
-        for i in range(len(self.dims)):
-            multipliers.append(self.dims[i]*multipliers[i-1] if i > 0 else 1)
-        self.multipliers = { #Dictionnary of multipliers for each level
-            i:multiplier for i,multiplier in zip(self.dimensions,multipliers[::-1])
-            }
-
-    def squeeze(self):
-        """Remove levels with only one label"""
-        for key in self.dimensions:
-            if len(self.labels[key]) == 1:
-                self.labels.pop(key)
-                self.multipliers.pop(key)
-                if key in self.mappings.keys():
-                    self.mappings.pop(key)
-        self.levels = len(self.labels)
-        self.dims = [len(dim) for dim in self.labels.values()]
-        self.dimensions = list(self.labels.keys())
-        self.ndim = len(self.dims)
-        
-
-    def swap_levels(self,level1,level2):
-        """Swap the positions of two levels in the Axe
-        
-        Parameters
-        ----------
-        level1 : int
-            Level to swap
-        level2 : int
-            Level to swap
-        """
-        if level1 not in self.labels.keys() or level2 not in self.labels.keys():
-            raise IndexError("Levels must be in the Axe")
-        dims = self.dimensions
-        dims[level1],dims[level2] = dims[level2],dims[level1]
-        self.dimensions = dims
-        self.dims = [len(dim) for dim in self.labels.values()]
-
-    def __str__(self):
-        return f"Axe object of len {len(self)}, with {self.levels} levels: {self.dimensions}"
-            
-    def label(self,as_index=False):
-        """ Generate the labels for the full axis
-
-        Parameters
-        ----------
-        as_index : bool, optional
-            Whether to return a Pandas MultiIndex. 
-            The default is False, in which case a list of labels is returned.
-
-        
-        Returns
-        -------
-        list of str
-            Labels along the Axe
-        """
-        if as_index:
-            if self.levels == 1:
-                return pd.Index(self.labels[self.dimensions[0]],name=self.dimensions[0])
-            return pd.MultiIndex.from_product(
-                [self.labels[key] for key in self.dimensions],
-                names = self.dimensions
-                )
-        return list(itertools.product(*[self.labels[key] for key in self.dimensions]))
-
-    
-    def isin(self,arg,level):
-        """
-        Assert whether an element is in the labels of a given level
-
-        Parameters
-        ----------
-        arg : str, int or list of int,str
-            Element to look for.
-        level : str
-            Key of the level to look into.
-
-        Returns
-        -------
-        bool
-            Whether the element is in the labels.
-
-        """
-        if "all" in arg:
-            return True
-        if isinstance(arg,(int,np.integer)) and arg < len(self.labels[level]):
-            return True
-        if isinstance(arg,str):
-            return arg in self.labels[level] \
-                or arg in self.mappings[level].keys()\
-                    or arg=="all"
-        if isinstance(arg,list):
-            for a in arg:
-                if not self.isin(a,level):
-                    return False
-            return True
-        raise TypeError(
-            "Arg must be a string, an int or a list of strings or ints."+\
-                " Input is of type "+str(type(arg))
-            )
-
-    def derive_mappings(self,groupings=None):
-        """Update the mappings of the Axe
-        
-        Mappings are defined at Axe level and derive from the current groupings
-        Mappings are used to convert grouping labels into indices
-
-        Parameters
-        ----------
-        groupings : dict of dict
-            Dict of groupings for each level of the Axe.
-            Grouping of labels into larger categories (e.g countries into zones).
-            If groupings contain references not in the labels, these are removed.
-            By default, groupings are set to the identity.
-        """
-        
-        if groupings is None:
-            for key in self.dimensions:
-                self.mappings[key] = {
-                    label:[i] for i,label in enumerate(self.labels[key])
-                }
-            return
-        to_sort = deepcopy(groupings)
-        for key in self.dimensions:
-            self.mappings[key] = dict()
-            covered = []
-
-            if to_sort is not None and key in to_sort.keys():
-                for group in to_sort[key].keys():
-                    idlist = []
-                    for label in to_sort[key][group]:
-                        if label not in self.labels[key]\
-                            and label != "all":
-                            log.debug(
-                                f"Label {label} in group {group} is not in the labels of the Axe"
-                                )
-                            to_sort[key][group].remove(label)
-                        elif label in covered:
-                            log.warning(
-                                f"Label {label} is in multiple groups and will be ignored from group {group}"
-                                )
-                        elif label == "all":
-                            idlist = [i for i in len(self.labels[key])]
-                            covered = self.labels[key] + "all"
-                        else:
-                            idlist.append(self.labels[key].index(label))
-                            covered.append(label)
-                    to_sort[key][group] = idlist.copy()
-                self.mappings[key] = to_sort[key].copy()
-            else:
-                self.mappings[key] = dict()
-
-    def update_groupings(self,groupings=None):
-        self.groupings = groupings
-        self.derive_mappings(groupings)
-    
-    def get_on(self,arg,level,multiplier):
-        """
-        Recursively get the index of an arg on a given level
-
-        Parameters
-        ----------
-        arg : str, int, list of str, int
-            Element to look for.
-        level : str
-            Key of the level to look into.
-        """
-        if isinstance(arg,str):
-            if arg == "all":
-                return [i*multiplier for i in range(len(self.labels[level]))]
-            if arg in self.mappings[level].keys():
-                return [
-                    i*multiplier for i in self.mappings[level][arg]
-                ]
-            return [self.labels[level].index(arg)*multiplier]
-        if isinstance(arg,(int,np.integer)):
-            return [arg*multiplier]
-        sel = []
-        for a in arg:
-            sel += self.get_on(a,level,multiplier)
-        return sel
-    
-    def get_single_ax(self,args):
-        """Make selection for single level Axes"""
-        sel = []
-        level = self.dimensions[0]
-        sel.append(self.get_on(args,level,self.multipliers[level]))
-        for level in range(1,self.levels):
-            #Fill the rest of the selection with all elements
-            sel.append([i*self.multipliers[level] for i in range(len(self.labels[level]))])
-        return [sum(arg) for arg in itertools.product(*sel)]
-    
-    def get_labels(self):
-        """Get the labels of the Axe as a dict"""
-        return {key:self.labels[key] for key in self.dimensions}
-    
-    def get_groupings(self):
-        """Get the groupings of the Axe"""
-        return self.groupings
-    
-    def get_labs(self,args):
-        """Extract the labels corresponding to a given selection of multiple levels
-        
-        Parameters
-        ----------
-        args : list of ints
-            Cleaned selection of indices
-        
-        Returns
-        -------
-        dict
-            Dict of labels for each level
-        """
-        labels = dict()
-        for i,key in enumerate(self.dimensions):
-            if isinstance(args[i],(str)):
-                labels[key] = [args[i]]
-            
-            else:
-                labels[key] = [
-                    self.labels[key][j//self.multipliers[key]] for j in args[i]
-                ]
-        return labels
-
-    def get(self,args,labels=False):
-        """
-        Get the indices corresponding to a selection on the Axe
-
-        Parameters
-        ----------
-        args : str, int, dict, list of str, int
-            Arguments to select on the Axe.
-            If a dict is passed, it is assumed that the keys are the dimensions of the Axe.
-            If a list is passed, it is assumed that the first element is the selection on the first level,
-            the second on the second level, etc. 
-            If the selection on multipler levels fails, the selection is assumed to be on the first level only.
-        labels : bool, optional
-            Whether to return the labels of the selection, by default False
-
-        Returns
-        -------
-        list of int or (list of ints, dict, dict)
-            If labels is False, returns the indices of the selection.
-            If labels is True, returns the indices of the selection, 
-            the labels of the selection and the groupings of the Axe.
-        """
-        if isinstance(args,(int,str,np.integer)):
-            if args == "all":
-                #Shortcut for all elements
-                sel = [i for i in range(len(self))]
-                if labels:
-                    return sel,self.labels.copy(),self.groupings
-                return sel
-            args = [args]
-        if all(isinstance(arg,(int,np.integer)) for arg in args):
-            #Shortcut for int based selection
-            if labels:
-                labels = self.label().copy()
-                labs = [labels[arg] for arg in args]
-                return args,labs,self.groupings
-            return args
-        if self.levels == 1:
-            if isinstance(args,dict):
-                args = list(args.values())
-            sel = self.get_on(args,self.dimensions[0],1)
-            if labels:
-                labs = {
-                    self.dimensions[0] : [self.labels[self.dimensions[0]][i] for i in sel]
-                }
-                return sel,labs,self.groupings
-            return sel
-        sel = []
-
-        #Preformat the args input
-        if isinstance(args,dict):
-            #Convert into a list
-            filled = []
-            for key in self.dimensions:
-                if key not in args.keys():
-                    filled.append(["all"])
-                else:
-                    if isinstance(args[key],list):
-                        filled.append(args[key])
-                    else:
-                        filled.append([args[key]])
-            if not all([key in self.dimensions for key in args.keys()]):
-                raise IndexError(f"Keys {args.keys()} are invalid in Axe with dimensions {self.dimensions}")
-            args = filled
-
-        if len(args) > self.levels:
-            #If the args length exceeds the number of levels,
-            #it is assumed that the selection is on the first level only
-            return self.get_single_ax(args)
-        #Otherwise, try to select on each level
-        try:
-            for level,arg in enumerate(args):
-                lname = self.dimensions[level]
-                sel.append(self.get_on(
-                    arg,lname,self.multipliers[lname]
-                    ))
-            for other_dim in range(level+1,self.levels):
-                lname = self.dimensions[other_dim]
-                sel.append(
-                    self.get_on(
-                        "all",lname,self.multipliers[lname])
-                    )
-            composed = [sum(arg) for arg in itertools.product(*sel)]
-            if labels:
-                labs = self.get_labs(sel)
-                return composed,labs,self.groupings
-            return composed
-        except IndexError:
-            #If it fails, try again on a single ax
-            return self.get_single_ax(args)
-    
-    def rename_labels(self,old,new):
-        """
-        Rename labels in the Axes
-
-        Parameters
-        ----------
-        old : str
-            Former label name
-        new : str
-            New name
-        """
-        if old not in self.labels.keys():
-            raise IndexError(f"Label {old} not in the Axe")
-        self.labels = { (new if key == old else key): val 
-                       for key, val in self.labels.items()}
-        self.mappints = { (new if key == old else key): val 
-                       for key, val in self.mappings.items()}
-        self.dimensions = list(self.labels.keys())
-        self.update_multipliers()
-        
-    def replace_labels(self,name,labels):
-        """
-        Replace a given label
-
-        Parameters
-        ----------
-        name : str
-            Name of the level to replace
-        labels : dict
-            New labels
-        """
-        self.labels.update(labels)
-        if name != list(labels.keys())[0]:
-            self.labels.pop(name)
-            self.dimensions = list(self.labels.keys())
-            self.mappings[labels.keys()[0]] = self.mappings.pop(name)
-            self.update_multipliers()
-    
-    def __getitem__(self,*a):
-        """
-        Indexing are passed to the get method
-        """
-        return self.get(*a)
-    
-    def __eq__(self,other):
-        if isinstance(other,Axe):
-            if self.labels == other.labels:
-                return True
-        return False
-    
-    
-    def has_dim(self,dim):
-        """Check whether a given dimension is in the Axe"""
-        return dim in self.dimensions
-    
-    def __len__(self):
-        """Get the full label length of the Axe"""
-        length = 1
-        for dim in self.labels.values():
-            length *= len(dim)
-        return length