mp-api 0.46.2rc11__tar.gz → 0.46.3__tar.gz

{mp_api-0.46.2rc11 → mp_api-0.46.3}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: mp-api
-Version: 0.46.2rc11
+Version: 0.46.3
 Summary: API Client for the Materials Project
 Author-email: The Materials Project <feedback@materialsproject.org>
 License-Expression: BSD-3-Clause-LBNL
@@ -17,7 +17,7 @@ Requires-Dist: pymatgen>2024.2.20
 Requires-Dist: typing-extensions>=3.7.4.1
 Requires-Dist: requests>=2.23.0
 Requires-Dist: monty>=2024.12.10
-Requires-Dist: emmet-core<0.87.2,>=0.87.0rc11
+Requires-Dist: emmet-core<0.87.2,>=0.87.0
 Requires-Dist: boto3
 Requires-Dist: orjson<4,>=3.10
 Requires-Dist: pyarrow>=20.0.0
@@ -40,7 +40,7 @@ Requires-Dist: cachetools; extra == "contribs"
 Requires-Dist: pymongo; extra == "contribs"
 Provides-Extra: all
 Requires-Dist: custodian; extra == "all"
-Requires-Dist: emmet-core[all]<0.87.2,>=0.87.0rc11; extra == "all"
+Requires-Dist: emmet-core[all]<0.87.2,>=0.87.0; extra == "all"
 Requires-Dist: fastmcp; extra == "all"
 Requires-Dist: flask; extra == "all"
 Provides-Extra: test

{mp_api-0.46.2rc11 → mp_api-0.46.3}/mp_api/client/core/client.py

@@ -33,7 +33,7 @@ import requests
 from botocore import UNSIGNED
 from botocore.config import Config
 from botocore.exceptions import ClientError
-from deltalake import DeltaTable, QueryBuilder, convert_to_deltalake
+from deltalake import DeltaTable, QueryBuilder, Schema, convert_to_deltalake
 from emmet.core.arrow import arrowize
 from emmet.core.utils import jsanitize
 from pydantic import BaseModel
@@ -79,6 +79,14 @@ STATIC_COLLECTIONS = [
     "synth-descriptions",
     "xas",
 ]
+CONTROLLED_COLLECTIONS = [
+    "chemenv",
+    "materials",
+    "oxidation-states",
+    "summary",
+    "tasks",
+    "thermo",
+]
 
 hdlr = logging.StreamHandler()
 fmt = logging.Formatter("%(name)s - %(levelname)s - %(message)s")
@@ -605,7 +613,7 @@ class BaseRester(_Rester):
             DeltaTable : If one exists at the specified bucket / prefix,
                 will retrieve the cached instance.
         """
-        delta_timeout = f"{self.timeout}s"
+        delta_timeout = f"{self.timeout * 3}s"
         full_key = f"{bucket}/{prefix}"
         qb_label = label or full_key.replace("/", "_").replace("-", "_")
 
@@ -630,6 +638,7 @@ class BaseRester(_Rester):
                     "AWS_REGION": "us-east-1",
                     "timeout": delta_timeout,
                     "connect_timeout": delta_timeout,
+                    "pool_idle_timeout": delta_timeout,
                     "retry_delay": "3",
                     "max_retries": f"{MAPI_CLIENT_SETTINGS.MAX_RETRIES}",
                 },
@@ -683,6 +692,7 @@ class BaseRester(_Rester):
         bucket: str,
         prefix: str,
         access_controlled: bool = True,
+        versioned: bool = False,
         timeout: int | None = None,
         label: str | None = None,
     ) -> dict[str, Any]:
@@ -692,12 +702,16 @@ class BaseRester(_Rester):
             bucket (str) : S3 OpenData bucket
             prefix (str) : S3 object prefix
             access_controlled (bool): whether or not table has access controlled data
+            versioned (bool): whether or not table is partitioned on db version
             timeout (int or None) : timeout on getting access-controlled groups
             label (str or None) : label of the table in QueryBuilder
 
         Returns:
             dict of str to Any
         """
+        # just in case
+        prefix = prefix.rstrip("/")
+
         # Check if user has access to GNoMe
         # temp suppress tqdm
         re_enable = not self.mute_progress_bars
@@ -755,11 +769,15 @@ class BaseRester(_Rester):
         controlled_batch_str = ",".join(
             [f"'{tag}'" for tag in self.access_controlled_batch_ids]
         )
+        _coll = prefix.split("/")[-1]
+
+        if _coll == "tasks":
+            condition = f"batch_id NOT IN ({controlled_batch_str})"
+        else:
+            condition = "builder_meta.license != 'BY-NC'"
 
         predicate = (
-            f"WHERE batch_id NOT IN ({controlled_batch_str})"
-            if not has_gnome_access and controlled_batch_str and access_controlled
-            else ""
+            f"WHERE {condition}" if not has_gnome_access and access_controlled else ""
         )
         # TODO: do we need something like this?
         # predicate += f"{' AND ' if predicate else 'WHERE '}version='{self.db_version}'"
@@ -768,10 +786,13 @@ class BaseRester(_Rester):
         num_docs_needed: int = tbl.count()
 
         if not has_gnome_access:
+            mongo_predicate = (
+                {"batch_id_neq_any": self.access_controlled_batch_ids}
+                if _coll == "tasks"
+                else {"license": "BY-NC"}
+            )
             try:
-                num_docs_needed = self.count(
-                    {"batch_id_neq_any": self.access_controlled_batch_ids}
-                )
+                num_docs_needed = self.count(mongo_predicate)
             except MPRestError:
                 # batch_id isn't a valid field
                 num_docs_needed = self.count()
@@ -793,7 +814,12 @@ class BaseRester(_Rester):
 
         file_options = ds.ParquetFileFormat().make_write_options(compression="zstd")
 
-        def _flush(accumulator: list[pa.RecordBatch], group: int, schema: pa.Schema):
+        def _flush(
+            accumulator: list[pa.RecordBatch],
+            group: int,
+            schema: pa.Schema,
+            partitioning: pa.dataset.Partitioning,
+        ):
             # somewhere post datafusion 51.0.0 and arrow-rs 57.0.0
             # casts to *View types began, need to cast back to base schema
             # -> pyarrow is behind on implementation support for *View types
@@ -807,6 +833,7 @@ class BaseRester(_Rester):
                 tbl,
                 base_dir=target_path,
                 format="parquet",
+                partitioning=partitioning,
                 basename_template=f"group-{group}-" + "part-{i}.zstd.parquet",
                 existing_data_behavior="overwrite_or_ignore",
                 max_rows_per_group=1024,
@@ -816,7 +843,18 @@ class BaseRester(_Rester):
         group = 1
         size = 0
         accumulator = []
-        schema = pa.schema(arrowize(self.document_model))
+        _schema = pa.schema(arrowize(self.document_model))
+        schema = (
+            _schema.insert(0, pa.field("version", pa.string()))
+            if versioned
+            else _schema
+        )
+        partitioning_schema = pa.schema([pa.field("version", pa.string())])
+        partitioning = (
+            pa.dataset.partitioning(partitioning_schema, flavor="hive")
+            if versioned
+            else None
+        )
         for page in iterator:
             # arro3 rb to pyarrow rb for compat w/ pyarrow ds writer
             rg = pa.record_batch(page)
@@ -828,13 +866,13 @@ class BaseRester(_Rester):
                 pbar.update(page_size)
 
             if size >= MAPI_CLIENT_SETTINGS.DATASET_FLUSH_THRESHOLD:
-                _flush(accumulator, group, schema)
+                _flush(accumulator, group, schema, partitioning)
                 group += 1
                 size = 0
                 accumulator.clear()
 
         if accumulator:
-            _flush(accumulator, group + 1, schema)
+            _flush(accumulator, group + 1, schema, partitioning)
 
         if pbar is not None:
             pbar.close()
@@ -842,7 +880,13 @@ class BaseRester(_Rester):
         logger.info(f"Dataset for {suffix} written to {target_path}")
         logger.info("Converting to DeltaTable...")
 
-        convert_to_deltalake(target_path)
+        delta_paritioning = Schema.from_arrow(partitioning_schema)
+
+        convert_to_deltalake(
+            target_path,
+            partition_by=delta_paritioning if versioned else None,
+            partition_strategy="hive" if versioned else None,
+        )
 
         logger.info(
             "Consult the delta-rs and pyarrow documentation for advanced usage: "
@@ -928,13 +972,15 @@ class BaseRester(_Rester):
                     suffix = self.suffix
                 elif self.suffix == "molecules/summary":
                     suffix = "molecules"
+                elif self.suffix == "molecules/jcesr":
+                    suffix = "jcesr"
                 else:
                     infix, suffix = self.suffix.split("/", 1)
                     suffix = infix if suffix == "core" else suffix
                     suffix = suffix.replace("_", "-")
 
                 if "tasks" in suffix:
-                    bucket_suffix, prefix = ("parsed", "core/tasks/")
+                    bucket_suffix, prefix = ("parsed", "core/tasks")
                 elif suffix in STATIC_COLLECTIONS:
                     bucket_suffix = "build"
                     prefix = f"static-collections/{suffix}"
@@ -946,9 +992,14 @@ class BaseRester(_Rester):
                 bucket = f"materialsproject-{bucket_suffix}"
 
                 if self.delta_backed:
-                    access_controlled = suffix not in STATIC_COLLECTIONS
+                    access_controlled = suffix in CONTROLLED_COLLECTIONS
+                    versioned = suffix != "tasks" and suffix not in STATIC_COLLECTIONS
                     return self._query_delta_backed(
-                        bucket, prefix, access_controlled, timeout=timeout
+                        bucket=bucket,
+                        prefix=prefix,
+                        access_controlled=access_controlled,
+                        versioned=versioned,
+                        timeout=timeout,
                     )
 
                 # Paginate over all entries in the bucket.

{mp_api-0.46.2rc11 → mp_api-0.46.3}/mp_api/client/routes/materials/materials.py

@@ -102,7 +102,7 @@ class MaterialsRester(CoreRester):
         Returns:
             ([MaterialsDoc], [dict]) List of material documents or dictionaries.
         """
-        query_params: dict = {"deprecated": deprecated}
+        query_params: dict = dict()
 
         if material_ids:
             if isinstance(material_ids, str):
@@ -163,6 +163,9 @@ class MaterialsRester(CoreRester):
             if query_params[entry] is not None
         }
 
+        if query_params:
+            query_params.update({"deprecated": deprecated})
+
         return super()._search(  # type: ignore[return-value]
             num_chunks=num_chunks,
             chunk_size=chunk_size,

{mp_api-0.46.2rc11 → mp_api-0.46.3}/mp_api.egg-info/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: mp-api
-Version: 0.46.2rc11
+Version: 0.46.3
 Summary: API Client for the Materials Project
 Author-email: The Materials Project <feedback@materialsproject.org>
 License-Expression: BSD-3-Clause-LBNL
@@ -17,7 +17,7 @@ Requires-Dist: pymatgen>2024.2.20
 Requires-Dist: typing-extensions>=3.7.4.1
 Requires-Dist: requests>=2.23.0
 Requires-Dist: monty>=2024.12.10
-Requires-Dist: emmet-core<0.87.2,>=0.87.0rc11
+Requires-Dist: emmet-core<0.87.2,>=0.87.0
 Requires-Dist: boto3
 Requires-Dist: orjson<4,>=3.10
 Requires-Dist: pyarrow>=20.0.0
@@ -40,7 +40,7 @@ Requires-Dist: cachetools; extra == "contribs"
 Requires-Dist: pymongo; extra == "contribs"
 Provides-Extra: all
 Requires-Dist: custodian; extra == "all"
-Requires-Dist: emmet-core[all]<0.87.2,>=0.87.0rc11; extra == "all"
+Requires-Dist: emmet-core[all]<0.87.2,>=0.87.0; extra == "all"
 Requires-Dist: fastmcp; extra == "all"
 Requires-Dist: flask; extra == "all"
 Provides-Extra: test

{mp_api-0.46.2rc11 → mp_api-0.46.3}/mp_api.egg-info/requires.txt

@@ -2,7 +2,7 @@ pymatgen>2024.2.20
 typing-extensions>=3.7.4.1
 requests>=2.23.0
 monty>=2024.12.10
-emmet-core<0.87.2,>=0.87.0rc11
+emmet-core<0.87.2,>=0.87.0
 boto3
 orjson<4,>=3.10
 pyarrow>=20.0.0
@@ -10,7 +10,7 @@ deltalake<1.6.0,>=1.4.0
 
 [all]
 custodian
-emmet-core[all]<0.87.2,>=0.87.0rc11
+emmet-core[all]<0.87.2,>=0.87.0
 fastmcp
 flask
 

{mp_api-0.46.2rc11 → mp_api-0.46.3}/pyproject.toml

@@ -24,7 +24,7 @@ dependencies = [
   "typing-extensions>=3.7.4.1",
   "requests>=2.23.0",
   "monty>=2024.12.10",
-  "emmet-core>=0.87.0rc11,<0.87.2",
+  "emmet-core>=0.87.0,<0.87.2",
   "boto3",
   "orjson >= 3.10,<4",
   "pyarrow >= 20.0.0",
@@ -50,7 +50,7 @@ contribs = [
 ]
 all = [
   "custodian",
-  "emmet-core[all]>=0.87.0rc11,<0.87.2",
+  "emmet-core[all]>=0.87.0,<0.87.2",
   "fastmcp",
   "flask",
 ]

{mp_api-0.46.2rc11 → mp_api-0.46.3}/requirements/requirements-ubuntu-latest_py3.11.txt

@@ -12,9 +12,9 @@ bibtexparser==1.4.4
     # via pymatgen-core
 blake3==1.0.8
     # via emmet-core
-boto3==1.43.24
+boto3==1.43.25
     # via mp-api (pyproject.toml)
-botocore==1.43.24
+botocore==1.43.25
     # via
     #   boto3
     #   s3transfer
@@ -30,7 +30,7 @@ deltalake==1.5.1
     # via mp-api (pyproject.toml)
 deprecated==1.3.1
     # via deltalake
-emmet-core==0.87.0rc13
+emmet-core==0.87.0
     # via mp-api (pyproject.toml)
 fonttools==4.63.0
     # via matplotlib

{mp_api-0.46.2rc11 → mp_api-0.46.3}/requirements/requirements-ubuntu-latest_py3.11_extras.txt

@@ -50,9 +50,9 @@ blinker==1.9.0
     # via flask
 boltons==25.0.0
     # via mp-api (pyproject.toml)
-boto3==1.43.24
+boto3==1.43.25
     # via mp-api (pyproject.toml)
-botocore==1.43.24
+botocore==1.43.25
     # via
     #   boto3
     #   s3transfer
@@ -103,7 +103,7 @@ deltalake==1.5.1
     # via mp-api (pyproject.toml)
 deprecated==1.3.1
     # via deltalake
-distlib==0.4.1
+distlib==0.4.2
     # via virtualenv
 dnspython==2.8.0
     # via
@@ -116,7 +116,7 @@ docutils==0.22.4
     # via sphinx
 email-validator==2.3.0
     # via pydantic
-emmet-core[all]==0.87.0rc13
+emmet-core[all]==0.87.0
     # via mp-api (pyproject.toml)
 exceptiongroup==1.3.1
     # via fastmcp-slim
@@ -124,9 +124,9 @@ execnet==2.1.2
     # via pytest-xdist
 executing==2.2.1
     # via stack-data
-fastmcp==3.4.1
+fastmcp==3.4.2
     # via mp-api (pyproject.toml)
-fastmcp-slim[client,server]==3.4.1
+fastmcp-slim[client,server]==3.4.2
     # via fastmcp
 filelock==3.29.1
     # via
@@ -215,7 +215,7 @@ joblib==1.5.3
     # via
     #   pymatgen-analysis-diffusion
     #   pymatgen-core
-joserfc==1.7.0
+joserfc==1.7.1
     # via
     #   authlib
     #   fastmcp-slim
@@ -644,7 +644,7 @@ types-requests==2.33.0.20260518
     #   types-tqdm
 types-setuptools==82.0.0.20260518
     # via mp-api (pyproject.toml)
-types-tqdm==4.67.3.20260518
+types-tqdm==4.68.0.20260608
     # via mp-api (pyproject.toml)
 typing-extensions==4.15.0
     # via
@@ -699,7 +699,7 @@ virtualenv==21.4.2
     # via pre-commit
 watchfiles==1.2.0
     # via fastmcp-slim
-wcwidth==0.7.0
+wcwidth==0.8.1
     # via prompt-toolkit
 webcolors==25.10.0
     # via jsonschema

{mp_api-0.46.2rc11 → mp_api-0.46.3}/requirements/requirements-ubuntu-latest_py3.12.txt

@@ -12,9 +12,9 @@ bibtexparser==1.4.4
     # via pymatgen-core
 blake3==1.0.8
     # via emmet-core
-boto3==1.43.24
+boto3==1.43.25
     # via mp-api (pyproject.toml)
-botocore==1.43.24
+botocore==1.43.25
     # via
     #   boto3
     #   s3transfer
@@ -30,7 +30,7 @@ deltalake==1.5.1
     # via mp-api (pyproject.toml)
 deprecated==1.3.1
     # via deltalake
-emmet-core==0.87.0rc13
+emmet-core==0.87.0
     # via mp-api (pyproject.toml)
 fonttools==4.63.0
     # via matplotlib

{mp_api-0.46.2rc11 → mp_api-0.46.3}/requirements/requirements-ubuntu-latest_py3.12_extras.txt

@@ -48,9 +48,9 @@ blinker==1.9.0
     # via flask
 boltons==25.0.0
     # via mp-api (pyproject.toml)
-boto3==1.43.24
+boto3==1.43.25
     # via mp-api (pyproject.toml)
-botocore==1.43.24
+botocore==1.43.25
     # via
     #   boto3
     #   s3transfer
@@ -101,7 +101,7 @@ deltalake==1.5.1
     # via mp-api (pyproject.toml)
 deprecated==1.3.1
     # via deltalake
-distlib==0.4.1
+distlib==0.4.2
     # via virtualenv
 dnspython==2.8.0
     # via
@@ -114,7 +114,7 @@ docutils==0.22.4
     # via sphinx
 email-validator==2.3.0
     # via pydantic
-emmet-core[all]==0.87.0rc13
+emmet-core[all]==0.87.0
     # via mp-api (pyproject.toml)
 exceptiongroup==1.3.1
     # via fastmcp-slim
@@ -122,9 +122,9 @@ execnet==2.1.2
     # via pytest-xdist
 executing==2.2.1
     # via stack-data
-fastmcp==3.4.1
+fastmcp==3.4.2
     # via mp-api (pyproject.toml)
-fastmcp-slim[client,server]==3.4.1
+fastmcp-slim[client,server]==3.4.2
     # via fastmcp
 filelock==3.29.1
     # via
@@ -211,7 +211,7 @@ joblib==1.5.3
     # via
     #   pymatgen-analysis-diffusion
     #   pymatgen-core
-joserfc==1.7.0
+joserfc==1.7.1
     # via
     #   authlib
     #   fastmcp-slim
@@ -640,7 +640,7 @@ types-requests==2.33.0.20260518
     #   types-tqdm
 types-setuptools==82.0.0.20260518
     # via mp-api (pyproject.toml)
-types-tqdm==4.67.3.20260518
+types-tqdm==4.68.0.20260608
     # via mp-api (pyproject.toml)
 typing-extensions==4.15.0
     # via
@@ -692,7 +692,7 @@ virtualenv==21.4.2
     # via pre-commit
 watchfiles==1.2.0
     # via fastmcp-slim
-wcwidth==0.7.0
+wcwidth==0.8.1
     # via prompt-toolkit
 webcolors==25.10.0
     # via jsonschema

{mp_api-0.46.2rc11 → mp_api-0.46.3}/requirements/requirements-ubuntu-latest_py3.13.txt

@@ -12,9 +12,9 @@ bibtexparser==1.4.4
     # via pymatgen-core
 blake3==1.0.8
     # via emmet-core
-boto3==1.43.24
+boto3==1.43.25
     # via mp-api (pyproject.toml)
-botocore==1.43.24
+botocore==1.43.25
     # via
     #   boto3
     #   s3transfer
@@ -30,7 +30,7 @@ deltalake==1.5.1
     # via mp-api (pyproject.toml)
 deprecated==1.3.1
     # via deltalake
-emmet-core==0.87.0rc13
+emmet-core==0.87.0
     # via mp-api (pyproject.toml)
 fonttools==4.63.0
     # via matplotlib

{mp_api-0.46.2rc11 → mp_api-0.46.3}/requirements/requirements-ubuntu-latest_py3.13_extras.txt

@@ -48,9 +48,9 @@ blinker==1.9.0
     # via flask
 boltons==25.0.0
     # via mp-api (pyproject.toml)
-boto3==1.43.24
+boto3==1.43.25
     # via mp-api (pyproject.toml)
-botocore==1.43.24
+botocore==1.43.25
     # via
     #   boto3
     #   s3transfer
@@ -101,7 +101,7 @@ deltalake==1.5.1
     # via mp-api (pyproject.toml)
 deprecated==1.3.1
     # via deltalake
-distlib==0.4.1
+distlib==0.4.2
     # via virtualenv
 dnspython==2.8.0
     # via
@@ -114,7 +114,7 @@ docutils==0.22.4
     # via sphinx
 email-validator==2.3.0
     # via pydantic
-emmet-core[all]==0.87.0rc13
+emmet-core[all]==0.87.0
     # via mp-api (pyproject.toml)
 exceptiongroup==1.3.1
     # via fastmcp-slim
@@ -122,9 +122,9 @@ execnet==2.1.2
     # via pytest-xdist
 executing==2.2.1
     # via stack-data
-fastmcp==3.4.1
+fastmcp==3.4.2
     # via mp-api (pyproject.toml)
-fastmcp-slim[client,server]==3.4.1
+fastmcp-slim[client,server]==3.4.2
     # via fastmcp
 filelock==3.29.1
     # via
@@ -211,7 +211,7 @@ joblib==1.5.3
     # via
     #   pymatgen-analysis-diffusion
     #   pymatgen-core
-joserfc==1.7.0
+joserfc==1.7.1
     # via
     #   authlib
     #   fastmcp-slim
@@ -640,7 +640,7 @@ types-requests==2.33.0.20260518
     #   types-tqdm
 types-setuptools==82.0.0.20260518
     # via mp-api (pyproject.toml)
-types-tqdm==4.67.3.20260518
+types-tqdm==4.68.0.20260608
     # via mp-api (pyproject.toml)
 typing-extensions==4.15.0
     # via
@@ -686,7 +686,7 @@ virtualenv==21.4.2
     # via pre-commit
 watchfiles==1.2.0
     # via fastmcp-slim
-wcwidth==0.7.0
+wcwidth==0.8.1
     # via prompt-toolkit
 webcolors==25.10.0
     # via jsonschema

{mp_api-0.46.2rc11 → mp_api-0.46.3}/requirements/requirements-ubuntu-latest_py3.14.txt

@@ -12,9 +12,9 @@ bibtexparser==1.4.4
     # via pymatgen-core
 blake3==1.0.8
     # via emmet-core
-boto3==1.43.24
+boto3==1.43.25
     # via mp-api (pyproject.toml)
-botocore==1.43.24
+botocore==1.43.25
     # via
     #   boto3
     #   s3transfer
@@ -30,7 +30,7 @@ deltalake==1.5.1
     # via mp-api (pyproject.toml)
 deprecated==1.3.1
     # via deltalake
-emmet-core==0.87.0rc13
+emmet-core==0.87.0
     # via mp-api (pyproject.toml)
 fonttools==4.63.0
     # via matplotlib

{mp_api-0.46.2rc11 → mp_api-0.46.3}/requirements/requirements-ubuntu-latest_py3.14_extras.txt

@@ -48,9 +48,9 @@ blinker==1.9.0
     # via flask
 boltons==25.0.0
     # via mp-api (pyproject.toml)
-boto3==1.43.24
+boto3==1.43.25
     # via mp-api (pyproject.toml)
-botocore==1.43.24
+botocore==1.43.25
     # via
     #   boto3
     #   s3transfer
@@ -101,7 +101,7 @@ deltalake==1.5.1
     # via mp-api (pyproject.toml)
 deprecated==1.3.1
     # via deltalake
-distlib==0.4.1
+distlib==0.4.2
     # via virtualenv
 dnspython==2.8.0
     # via
@@ -114,7 +114,7 @@ docutils==0.22.4
     # via sphinx
 email-validator==2.3.0
     # via pydantic
-emmet-core[all]==0.87.0rc13
+emmet-core[all]==0.87.0
     # via mp-api (pyproject.toml)
 exceptiongroup==1.3.1
     # via fastmcp-slim
@@ -122,9 +122,9 @@ execnet==2.1.2
     # via pytest-xdist
 executing==2.2.1
     # via stack-data
-fastmcp==3.4.1
+fastmcp==3.4.2
     # via mp-api (pyproject.toml)
-fastmcp-slim[client,server]==3.4.1
+fastmcp-slim[client,server]==3.4.2
     # via fastmcp
 filelock==3.29.1
     # via
@@ -211,7 +211,7 @@ joblib==1.5.3
     # via
     #   pymatgen-analysis-diffusion
     #   pymatgen-core
-joserfc==1.7.0
+joserfc==1.7.1
     # via
     #   authlib
     #   fastmcp-slim
@@ -640,7 +640,7 @@ types-requests==2.33.0.20260518
     #   types-tqdm
 types-setuptools==82.0.0.20260518
     # via mp-api (pyproject.toml)
-types-tqdm==4.67.3.20260518
+types-tqdm==4.68.0.20260608
     # via mp-api (pyproject.toml)
 typing-extensions==4.15.0
     # via
@@ -686,7 +686,7 @@ virtualenv==21.4.2
     # via pre-commit
 watchfiles==1.2.0
     # via fastmcp-slim
-wcwidth==0.7.0
+wcwidth==0.8.1
     # via prompt-toolkit
 webcolors==25.10.0
     # via jsonschema