mosamatic2 2.0.17__tar.gz → 2.0.18__tar.gz

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Files changed (114) hide show
  1. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/PKG-INFO +1 -1
  2. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/pyproject.toml +1 -1
  3. mosamatic2-2.0.18/src/mosamatic2/ui/resources/VERSION +1 -0
  4. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/pipelines/defaultdockerpipelinepanel.py +5 -1
  5. mosamatic2-2.0.17/src/mosamatic2/ui/resources/VERSION +0 -1
  6. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/README.md +0 -0
  7. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/models.py +0 -0
  8. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/__init__.py +0 -0
  9. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/app.py +0 -0
  10. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/cli.py +0 -0
  11. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/commands/__init__.py +0 -0
  12. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/commands/boadockerpipeline.py +0 -0
  13. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/commands/calculatemaskstatistics.py +0 -0
  14. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/commands/calculatescores.py +0 -0
  15. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/commands/createdicomsummary.py +0 -0
  16. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/commands/createpngsfromsegmentations.py +0 -0
  17. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/commands/defaultdockerpipeline.py +0 -0
  18. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/commands/defaultpipeline.py +0 -0
  19. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/commands/dicom2nifti.py +0 -0
  20. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/commands/liveranalysispipeline.py +0 -0
  21. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/commands/rescaledicomimages.py +0 -0
  22. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/commands/segmentmusclefatl3tensorflow.py +0 -0
  23. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/commands/selectslicefromscans.py +0 -0
  24. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/commands/totalsegmentator.py +0 -0
  25. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/constants.py +0 -0
  26. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/__init__.py +0 -0
  27. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/data/__init__.py +0 -0
  28. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/data/dicomimage.py +0 -0
  29. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/data/dicomimageseries.py +0 -0
  30. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/data/dixonseries.py +0 -0
  31. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/data/filedata.py +0 -0
  32. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/data/multidicomimage.py +0 -0
  33. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/data/multiniftiimage.py +0 -0
  34. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/data/multinumpyimage.py +0 -0
  35. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/data/niftiimage.py +0 -0
  36. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/data/numpyimage.py +0 -0
  37. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/managers/__init__.py +0 -0
  38. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/managers/logmanager.py +0 -0
  39. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/managers/logmanagerlistener.py +0 -0
  40. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/pipelines/__init__.py +0 -0
  41. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/pipelines/boadockerpipeline/__init__.py +0 -0
  42. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/pipelines/boadockerpipeline/boadockerpipeline.py +0 -0
  43. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/pipelines/defaultdockerpipeline/__init__.py +0 -0
  44. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/pipelines/defaultdockerpipeline/defaultdockerpipeline.py +0 -0
  45. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/pipelines/defaultpipeline/__init__.py +0 -0
  46. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/pipelines/defaultpipeline/defaultpipeline.py +0 -0
  47. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/pipelines/liveranalysispipeline/__init__.py +0 -0
  48. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/pipelines/liveranalysispipeline/liveranalysispipeline.py +0 -0
  49. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/pipelines/pipeline.py +0 -0
  50. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/singleton.py +0 -0
  51. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/__init__.py +0 -0
  52. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/calculatemaskstatisticstask/__init__.py +0 -0
  53. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/calculatemaskstatisticstask/calculatemaskstatisticstask.py +0 -0
  54. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/calculatescorestask/__init__.py +0 -0
  55. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/calculatescorestask/calculatescorestask.py +0 -0
  56. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/createdicomsummarytask/__init__.py +0 -0
  57. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/createdicomsummarytask/createdicomsummarytask.py +0 -0
  58. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/createpngsfromsegmentationstask/__init__.py +0 -0
  59. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/createpngsfromsegmentationstask/createpngsfromsegmentationstask.py +0 -0
  60. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/dicom2niftitask/__init__.py +0 -0
  61. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/dicom2niftitask/dicom2niftitask.py +0 -0
  62. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/rescaledicomimagestask/__init__.py +0 -0
  63. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/rescaledicomimagestask/rescaledicomimagestask.py +0 -0
  64. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/segmentmusclefatl3tensorflowtask/__init__.py +0 -0
  65. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/segmentmusclefatl3tensorflowtask/paramloader.py +0 -0
  66. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/segmentmusclefatl3tensorflowtask/segmentmusclefatl3tensorflowtask.py +0 -0
  67. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/selectslicefromscanstask/__init__.py +0 -0
  68. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/selectslicefromscanstask/selectslicefromscanstask.py +0 -0
  69. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/task.py +0 -0
  70. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/totalsegmentatortask/__init__.py +0 -0
  71. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/tasks/totalsegmentatortask/totalsegmentatortask.py +0 -0
  72. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/core/utils.py +0 -0
  73. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/server.py +0 -0
  74. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/__init__.py +0 -0
  75. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/mainwindow.py +0 -0
  76. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/resources/icons/mosamatic2.icns +0 -0
  77. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/resources/icons/mosamatic2.ico +0 -0
  78. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/resources/icons/spinner.gif +0 -0
  79. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/resources/images/body-composition.jpg +0 -0
  80. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/settings.py +0 -0
  81. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/utils.py +0 -0
  82. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/__init__.py +0 -0
  83. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/dialogs/__init__.py +0 -0
  84. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/dialogs/dialog.py +0 -0
  85. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/dialogs/helpdialog.py +0 -0
  86. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/__init__.py +0 -0
  87. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/defaultpanel.py +0 -0
  88. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/logpanel.py +0 -0
  89. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/mainpanel.py +0 -0
  90. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/pipelines/__init__.py +0 -0
  91. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/pipelines/boadockerpipelinepanel.py +0 -0
  92. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/pipelines/defaultpipelinepanel.py +0 -0
  93. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/pipelines/liveranalysispipelinepanel.py +0 -0
  94. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/pipelines/pipelinepanel.py +0 -0
  95. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/stackedpanel.py +0 -0
  96. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/tasks/__init__.py +0 -0
  97. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/tasks/calculatemaskstatisticstaskpanel.py +0 -0
  98. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/tasks/calculatescorestaskpanel.py +0 -0
  99. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/tasks/createdicomsummarytaskpanel.py +0 -0
  100. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/tasks/createpngsfromsegmentationstaskpanel.py +0 -0
  101. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/tasks/dicom2niftitaskpanel.py +0 -0
  102. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/tasks/rescaledicomimagestaskpanel.py +0 -0
  103. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/tasks/segmentmusclefatl3tensorflowtaskpanel.py +0 -0
  104. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/tasks/selectslicefromscanstaskpanel.py +0 -0
  105. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/tasks/taskpanel.py +0 -0
  106. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/tasks/totalsegmentatortaskpanel.py +0 -0
  107. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/visualizations/__init__.py +0 -0
  108. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/visualizations/slicevisualization/__init__.py +0 -0
  109. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/visualizations/slicevisualization/custominteractorstyle.py +0 -0
  110. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/visualizations/slicevisualization/sliceviewer.py +0 -0
  111. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/visualizations/slicevisualization/slicevisualization.py +0 -0
  112. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/panels/visualizations/visualization.py +0 -0
  113. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/widgets/splashscreen.py +0 -0
  114. {mosamatic2-2.0.17 → mosamatic2-2.0.18}/src/mosamatic2/ui/worker.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.3
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  Name: mosamatic2
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- Version: 2.0.17
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+ Version: 2.0.18
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  Summary:
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  Author: Ralph Brecheisen
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  Author-email: r.brecheisen@maastrichtuniversity.nl
@@ -1,6 +1,6 @@
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  [project]
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  name = "mosamatic2"
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- version = "2.0.17"
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+ version = "2.0.18"
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  description = ""
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  authors = [
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  {name = "Ralph Brecheisen", email = "r.brecheisen@maastrichtuniversity.nl"}
@@ -145,7 +145,7 @@ class DefaultDockerPipelinePanel(PipelinePanel):
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146
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  def version_line_edit(self):
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  if not self._version_line_edit:
148
- self._version_line_edit = QLineEdit()
148
+ self._version_line_edit = QLineEdit('2.0.10')
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  self._version_line_edit.setText(self.settings().get(f'{PANEL_NAME}/version'))
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  return self._version_line_edit
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@@ -182,6 +182,7 @@ class DefaultDockerPipelinePanel(PipelinePanel):
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  output_dir_layout.addWidget(self.output_dir_select_button())
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  self.form_layout().addRow('Images directory', images_dir_layout)
184
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  self.form_layout().addRow('Model files directory', model_files_dir_layout)
185
+ self.form_layout().addRow('Docker image version', self.version_line_edit())
185
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  self.form_layout().addRow('Output directory', output_dir_layout)
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  self.form_layout().addRow('Overwrite', self.overwrite_checkbox())
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  layout = QVBoxLayout()
@@ -297,6 +298,8 @@ class DefaultDockerPipelinePanel(PipelinePanel):
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  errors.append('Empty model files directory path')
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  elif not os.path.isdir(self.model_files_dir_line_edit().text()):
299
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  errors.append('Model files directory does not exist')
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+ if self.version_line_edit().text() == '':
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+ errors.append('Empty Docker image version')
300
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  if self.output_dir_line_edit().text() == '':
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  errors.append('Empty output directory path')
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  elif os.path.isdir(self.output_dir_line_edit().text()) and not self.overwrite_checkbox().isChecked():
@@ -306,5 +309,6 @@ class DefaultDockerPipelinePanel(PipelinePanel):
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  def save_inputs_and_parameters(self):
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  self.settings().set(f'{PANEL_NAME}/images_dir', self.images_dir_line_edit().text())
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  self.settings().set(f'{PANEL_NAME}/model_files_dir', self.model_files_dir_line_edit().text())
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+ self.settings().set(f'{PANEL_NAME}/version', self.version_line_edit().text())
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  self.settings().set(f'{PANEL_NAME}/output_dir', self.output_dir_line_edit().text())
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  self.settings().set(f'{PANEL_NAME}/overwrite', self.overwrite_checkbox().isChecked())
@@ -1 +0,0 @@
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- 2.0.17
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