moducomp 0.7.10__tar.gz → 0.7.11__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: moducomp
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- Version: 0.7.10
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+ Version: 0.7.11
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  Summary: moducomp: metabolic module completeness and complementarity for microbiomes.
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  Keywords: bioinformatics,microbiome,metabolic,kegg,genomics
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  Author-email: "Juan C. Villada" <jvillada@lbl.gov>
@@ -120,17 +120,17 @@ graph TD
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  C -->|analyze-ko-matrix| H[Load existing KO matrix]
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  D --> E[Prepare genomes: adapt headers or copy to tmp]
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  E --> F[Merge genomes into single FAA]
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- F --> G[Run eggNOG-mapper (if needed)]
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- G --> H[Create KO matrix (`kos_matrix.csv`)]
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+ F --> G[Run eggNOG-mapper if needed]
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+ G --> H[Create KO matrix kos_matrix.csv]
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  H --> I[Convert KO matrix to KPCT input]
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- I --> J[Run KPCT (parallel with fallback)]
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+ I --> J[Run KPCT with parallel fallback]
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  J --> K[Create module completeness matrix]
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  K --> L{Complementarity requested?}
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- L -->|Yes| M[Generate complementarity report(s)]
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+ L -->|Yes| M[Generate complementarity reports]
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  L -->|No| N[Skip]
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- M --> O[Write outputs + logs]
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+ M --> O[Write outputs and logs]
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  N --> O
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- O --> P[Optional cleanup of `tmp/`]
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+ O --> P[Optional cleanup of tmp]
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  P --> Q([Pipeline complete])
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  ```
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@@ -95,17 +95,17 @@ graph TD
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  C -->|analyze-ko-matrix| H[Load existing KO matrix]
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  D --> E[Prepare genomes: adapt headers or copy to tmp]
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  E --> F[Merge genomes into single FAA]
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- F --> G[Run eggNOG-mapper (if needed)]
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- G --> H[Create KO matrix (`kos_matrix.csv`)]
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+ F --> G[Run eggNOG-mapper if needed]
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+ G --> H[Create KO matrix kos_matrix.csv]
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  H --> I[Convert KO matrix to KPCT input]
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- I --> J[Run KPCT (parallel with fallback)]
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+ I --> J[Run KPCT with parallel fallback]
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  J --> K[Create module completeness matrix]
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  K --> L{Complementarity requested?}
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- L -->|Yes| M[Generate complementarity report(s)]
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+ L -->|Yes| M[Generate complementarity reports]
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  L -->|No| N[Skip]
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- M --> O[Write outputs + logs]
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+ M --> O[Write outputs and logs]
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  N --> O
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- O --> P[Optional cleanup of `tmp/`]
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+ O --> P[Optional cleanup of tmp]
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  P --> Q([Pipeline complete])
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  ```
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@@ -2,7 +2,7 @@
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  moducomp: metabolic module completeness and complementarity for microbiomes.
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  """
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- __version__ = "0.7.10"
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+ __version__ = "0.7.11"
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  __author__ = "Juan C. Villada"
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  __email__ = "jvillada@lbl.gov"
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  __title__ = "moducomp"
@@ -1,5 +1,5 @@
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  context:
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- version: 0.7.10
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+ version: 0.7.11
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  package:
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  name: moducomp
@@ -7,7 +7,7 @@ package:
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  source:
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  - url: https://pypi.org/packages/source/m/moducomp/moducomp-${{ version }}.tar.gz
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- sha256: 440e0dbde36b029c5fb7e874fba8642621b556d9c8914f213e0360294228b019
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+ sha256: a3378f21a0af940ac015d17297e8e0fa61e6ffd59931414c1c16d69f667f1c52
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  build:
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  script:
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