mlquantify 0.1.14__tar.gz → 0.1.15__tar.gz

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Files changed (61) hide show
  1. {mlquantify-0.1.14/mlquantify.egg-info → mlquantify-0.1.15}/PKG-INFO +1 -1
  2. mlquantify-0.1.15/VERSION.txt +1 -0
  3. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/adjust_counting/_adjustment.py +17 -10
  4. {mlquantify-0.1.14 → mlquantify-0.1.15/mlquantify.egg-info}/PKG-INFO +1 -1
  5. mlquantify-0.1.14/VERSION.txt +0 -1
  6. {mlquantify-0.1.14 → mlquantify-0.1.15}/MANIFEST.in +0 -0
  7. {mlquantify-0.1.14 → mlquantify-0.1.15}/README.md +0 -0
  8. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/__init__.py +0 -0
  9. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/adjust_counting/__init__.py +0 -0
  10. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/adjust_counting/_base.py +0 -0
  11. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/adjust_counting/_counting.py +0 -0
  12. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/adjust_counting/_utils.py +0 -0
  13. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/base.py +0 -0
  14. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/base_aggregative.py +0 -0
  15. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/calibration.py +0 -0
  16. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/confidence.py +0 -0
  17. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/likelihood/__init__.py +0 -0
  18. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/likelihood/_base.py +0 -0
  19. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/likelihood/_classes.py +0 -0
  20. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/meta/__init__.py +0 -0
  21. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/meta/_classes.py +0 -0
  22. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/metrics/__init__.py +0 -0
  23. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/metrics/_oq.py +0 -0
  24. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/metrics/_rq.py +0 -0
  25. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/metrics/_slq.py +0 -0
  26. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/mixture/__init__.py +0 -0
  27. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/mixture/_base.py +0 -0
  28. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/mixture/_classes.py +0 -0
  29. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/mixture/_utils.py +0 -0
  30. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/model_selection/__init__.py +0 -0
  31. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/model_selection/_protocol.py +0 -0
  32. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/model_selection/_search.py +0 -0
  33. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/model_selection/_split.py +0 -0
  34. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/multiclass.py +0 -0
  35. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/neighbors/__init__.py +0 -0
  36. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/neighbors/_base.py +0 -0
  37. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/neighbors/_classes.py +0 -0
  38. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/neighbors/_classification.py +0 -0
  39. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/neighbors/_kde.py +0 -0
  40. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/neighbors/_utils.py +0 -0
  41. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/neural/__init__.py +0 -0
  42. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/utils/__init__.py +0 -0
  43. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/utils/_artificial.py +0 -0
  44. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/utils/_constraints.py +0 -0
  45. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/utils/_context.py +0 -0
  46. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/utils/_decorators.py +0 -0
  47. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/utils/_exceptions.py +0 -0
  48. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/utils/_get_scores.py +0 -0
  49. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/utils/_load.py +0 -0
  50. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/utils/_parallel.py +0 -0
  51. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/utils/_random.py +0 -0
  52. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/utils/_sampling.py +0 -0
  53. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/utils/_tags.py +0 -0
  54. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/utils/_validation.py +0 -0
  55. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify/utils/prevalence.py +0 -0
  56. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify.egg-info/SOURCES.txt +0 -0
  57. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify.egg-info/dependency_links.txt +0 -0
  58. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify.egg-info/requires.txt +0 -0
  59. {mlquantify-0.1.14 → mlquantify-0.1.15}/mlquantify.egg-info/top_level.txt +0 -0
  60. {mlquantify-0.1.14 → mlquantify-0.1.15}/setup.cfg +0 -0
  61. {mlquantify-0.1.14 → mlquantify-0.1.15}/setup.py +0 -0
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: mlquantify
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- Version: 0.1.14
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+ Version: 0.1.15
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  Summary: Quantification Library
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  Home-page: https://github.com/luizfernandolj/QuantifyML/tree/master
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  Maintainer: Luiz Fernando Luth Junior
@@ -0,0 +1 @@
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+ 0.1.15
@@ -2,6 +2,7 @@ import numpy as np
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  from abc import abstractmethod
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  from scipy.optimize import minimize
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  import warnings
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+ from sklearn.metrics import confusion_matrix
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  from mlquantify.adjust_counting._base import BaseAdjustCount
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  from mlquantify.adjust_counting._counting import CC, PCC
@@ -208,7 +209,7 @@ class MatrixAdjustment(BaseAdjustCount):
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  prevs_estim = self._get_estimations(predictions > priors)
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  prevalence = self._solve_optimization(prevs_estim, priors)
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  else:
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- self.CM = self._compute_confusion_matrix(train_y_pred)
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+ self.CM = self._compute_confusion_matrix(train_y_pred, train_y_values)
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  prevs_estim = self._get_estimations(predictions)
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  prevalence = self._solve_linear(prevs_estim)
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@@ -389,8 +390,11 @@ class GAC(CrispLearnerQMixin, MatrixAdjustment):
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  def __init__(self, learner=None):
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  super().__init__(learner=learner, solver='linear')
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- def _compute_confusion_matrix(self, predictions):
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- prev_estim = self._get_estimations(predictions)
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+ def _compute_confusion_matrix(self, predictions, y_values):
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+ self.CM = confusion_matrix(y_values, predictions, labels=self.classes_).T
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+ self.CM = self.CM.astype(float)
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+ prev_estim = self.CM.sum(axis=0)
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+
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  for i, _ in enumerate(self.classes_):
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  if prev_estim[i] == 0:
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  self.CM[i, i] = 1
@@ -448,13 +452,16 @@ class GPAC(SoftLearnerQMixin, MatrixAdjustment):
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  def __init__(self, learner=None):
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  super().__init__(learner=learner, solver='linear')
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- def _compute_confusion_matrix(self, posteriors):
452
- prev_estim = self._get_estimations(posteriors)
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- for i, _ in enumerate(self.classes_):
454
- if prev_estim[i] == 0:
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- self.CM[i, i] = 1
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- else:
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- self.CM[:, i] /= prev_estim[i]
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+ def _compute_confusion_matrix(self, posteriors, y_values):
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+ n_classes = len(self.classes_)
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+ confusion = np.eye(n_classes)
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+
459
+ for i, class_label in enumerate(self.classes_):
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+ indices = (y_values == class_label)
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+ if np.any(indices):
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+ confusion[i] = posteriors[indices].mean(axis=0)
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+
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+ self.CM = confusion.T
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  return self.CM
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@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: mlquantify
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- Version: 0.1.14
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+ Version: 0.1.15
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  Summary: Quantification Library
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  Home-page: https://github.com/luizfernandolj/QuantifyML/tree/master
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  Maintainer: Luiz Fernando Luth Junior
@@ -1 +0,0 @@
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- 0.1.14
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