mimical 0.0.5__tar.gz → 0.0.6__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {mimical-0.0.5 → mimical-0.0.6}/PKG-INFO +1 -1
- {mimical-0.0.5 → mimical-0.0.6}/mimical/fitting/fitter.py +11 -9
- {mimical-0.0.5 → mimical-0.0.6}/mimical.egg-info/PKG-INFO +1 -1
- {mimical-0.0.5 → mimical-0.0.6}/setup.py +1 -1
- {mimical-0.0.5 → mimical-0.0.6}/README.md +0 -0
- {mimical-0.0.5 → mimical-0.0.6}/mimical/__init__.py +0 -0
- {mimical-0.0.5 → mimical-0.0.6}/mimical/fitting/__init__.py +0 -0
- {mimical-0.0.5 → mimical-0.0.6}/mimical/fitting/prior_handler.py +0 -0
- {mimical-0.0.5 → mimical-0.0.6}/mimical/plotting/__init__.py +0 -0
- {mimical-0.0.5 → mimical-0.0.6}/mimical/plotting/plotting.py +0 -0
- {mimical-0.0.5 → mimical-0.0.6}/mimical/utils/__init__.py +0 -0
- {mimical-0.0.5 → mimical-0.0.6}/mimical/utils/filter_set.py +0 -0
- {mimical-0.0.5 → mimical-0.0.6}/mimical.egg-info/SOURCES.txt +0 -0
- {mimical-0.0.5 → mimical-0.0.6}/mimical.egg-info/dependency_links.txt +0 -0
- {mimical-0.0.5 → mimical-0.0.6}/mimical.egg-info/requires.txt +0 -0
- {mimical-0.0.5 → mimical-0.0.6}/mimical.egg-info/top_level.txt +0 -0
- {mimical-0.0.5 → mimical-0.0.6}/setup.cfg +0 -0
|
@@ -149,7 +149,7 @@ class mimical(object):
|
|
|
149
149
|
|
|
150
150
|
|
|
151
151
|
if os.path.isfile(dir_path+'/mimical/posteriors' + f'/{self.id}.txt'):
|
|
152
|
-
samples = pd.read_csv(dir_path+'/mimical/posteriors' + f'/{self.id}.txt', delimiter=' ').to_numpy()
|
|
152
|
+
self.samples = pd.read_csv(dir_path+'/mimical/posteriors' + f'/{self.id}.txt', delimiter=' ').to_numpy()
|
|
153
153
|
|
|
154
154
|
else:
|
|
155
155
|
# Run sampler
|
|
@@ -169,20 +169,22 @@ class mimical(object):
|
|
|
169
169
|
# Sample an appropriately weighted posterior for representative samples.
|
|
170
170
|
n_post = 10000
|
|
171
171
|
indices = np.random.choice(np.arange(points.shape[0]), size = n_post, p=np.exp(log_w))
|
|
172
|
-
samples = points[indices]
|
|
173
|
-
samples_df = pd.DataFrame(data=samples, columns=self.fitter_prior.keys)
|
|
172
|
+
self.samples = points[indices]
|
|
173
|
+
samples_df = pd.DataFrame(data=self.samples, columns=self.fitter_prior.keys)
|
|
174
174
|
samples_df.to_csv(dir_path+'/mimical/posteriors' + f'/{self.id}.txt', sep=' ', index=False)
|
|
175
175
|
|
|
176
|
-
|
|
177
|
-
# Plot and save the median-parameter fit
|
|
178
|
-
Plotter().plot_median(self.images, self.wavs, self.convolved_models, samples, list(self.fitter_prior.keys), self.prior_handler)
|
|
179
|
-
plt.savefig(dir_path+'/mimical/plots' + f'/{self.id}_best_model.pdf', bbox_inches='tight')
|
|
180
|
-
|
|
181
176
|
# Return the median-parameter model
|
|
182
|
-
fit_dic = dict(zip((np.array((list(self.fitter_prior.keys)))+"_50").tolist(), np.median(samples, axis=0).tolist()))
|
|
177
|
+
fit_dic = dict(zip((np.array((list(self.fitter_prior.keys)))+"_50").tolist(), np.median(self.samples, axis=0).tolist()))
|
|
183
178
|
|
|
184
179
|
print("Finished.")
|
|
185
180
|
print(" ")
|
|
186
181
|
|
|
187
182
|
return fit_dic
|
|
183
|
+
|
|
184
|
+
|
|
185
|
+
def plot_model(self):
|
|
186
|
+
# Plot and save the median-parameter fit
|
|
187
|
+
Plotter().plot_median(self.images, self.wavs, self.convolved_models, self.samples, list(self.fitter_prior.keys), self.prior_handler)
|
|
188
|
+
plt.savefig(dir_path+'/mimical/plots' + f'/{self.id}_best_model.pdf', bbox_inches='tight')
|
|
189
|
+
|
|
188
190
|
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|
|
File without changes
|