microlive 1.0.12__tar.gz → 1.0.13__tar.gz

{microlive-1.0.12 → microlive-1.0.13}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: microlive
-Version: 1.0.12
+Version: 1.0.13
 Summary: Live-cell microscopy image analysis and single-molecule measurements
 Project-URL: Homepage, https://github.com/ningzhaoAnschutz/microlive
 Project-URL: Documentation, https://github.com/ningzhaoAnschutz/microlive/blob/main/docs/user_guide.md

{microlive-1.0.12 → microlive-1.0.13}/microlive/__init__.py

@@ -23,7 +23,7 @@ Authors:
     Nathan L. Nowling, Brian Munsky, Ning Zhao
 """
 
-__version__ = "1.0.12"
+__version__ = "1.0.13"
 __author__ = "Luis U. Aguilera, William S. Raymond, Rhiannon M. Sears, Nathan L. Nowling, Brian Munsky, Ning Zhao"
 
 # Package name (for backward compatibility)

{microlive-1.0.12 → microlive-1.0.13}/microlive/microscopy.py

@@ -1914,9 +1914,14 @@ class Cellpose():
         # Initialize Cellpose model
         if self.pretrained_model is None:
             if self.model_type == 'cyto3':
-                model = denoise.CellposeDenoiseModel(gpu=use_gpu, model_type="cyto3",
-                                     restore_type="denoise_cyto3")
-                logging.debug('Cellpose: Model cyto3 loaded')
+                try:
+                    model = denoise.CellposeDenoiseModel(gpu=use_gpu, model_type="cyto3",
+                                         restore_type="denoise_cyto3")
+                    logging.debug('Cellpose: Model cyto3 loaded')
+                except Exception as e:
+                    logging.warning(f"Failed to load cyto3 model: {e}. Falling back to 'cyto2'.")
+                    self.model_type = 'cyto2'
+                    model = models.Cellpose(gpu=use_gpu, model_type='cyto2')
             else:
                 model = models.Cellpose(gpu=use_gpu, model_type=self.model_type)  # model_type = 'cyto' or 'nuclei'
         else: