mhcseqs 2.2.2__tar.gz → 2.3.1__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/PKG-INFO +6 -6
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/README.md +5 -5
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs/diverse_mhc_sequences.csv +74 -74
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs/pipeline.py +11 -0
- mhcseqs-2.3.1/mhcseqs/version.py +1 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs.egg-info/PKG-INFO +6 -6
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/tests/test_curate_diverse_mhc.py +12 -0
- mhcseqs-2.2.2/mhcseqs/version.py +0 -1
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/LICENSE +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs/__init__.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs/__main__.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs/alleles.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs/b2m_sequences.csv +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs/domain_grammar.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs/domain_parsing.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs/download.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs/imgt.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs/mouse_h2_sequences.csv +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs/species.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs/validate.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs.egg-info/SOURCES.txt +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs.egg-info/dependency_links.txt +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs.egg-info/entry_points.txt +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs.egg-info/requires.txt +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/mhcseqs.egg-info/top_level.txt +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/pyproject.toml +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/setup.cfg +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/tests/test_alleles.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/tests/test_cli.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/tests/test_download.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/tests/test_evaluate_sp_ground_truth.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/tests/test_groove.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/tests/test_groove_class_ii.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/tests/test_imgt.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/tests/test_mutations.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/tests/test_package_api.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/tests/test_pipeline.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/tests/test_species.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/tests/test_species_coverage.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/tests/test_validate.py +0 -0
- {mhcseqs-2.2.2 → mhcseqs-2.3.1}/tests/test_version.py +0 -0
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Metadata-Version: 2.4
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Name: mhcseqs
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Version: 2.
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Version: 2.3.1
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Summary: MHC sequence curation and binding groove extraction
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License-Expression: Apache-2.0
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Classifier: Development Status :: 4 - Beta
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@@ -107,7 +107,7 @@ Three sources are merged into a single dataset:
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| UniProt | 20,566 | 500+ species | Curated diverse MHC, B2M, H-2 references (shipped in package) |
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| **Total raw** | **77,576** | | |
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| **After merge/dedup** | **55,696** | | One representative per two-field allele |
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| **Groove OK** | **54,
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| **Groove OK** | **54,155** | | 97.2% of representatives |
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### By species category
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|---|---:|---:|---:|---:|
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| human | 25,364 | 99.8% | 17,364 | 5,347 |
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| nhp | 7,125 | 98.0% | 4,582 | 1,429 |
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| bird | 9,312 | 99.
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| bird | 9,312 | 99.1% | 553 | 558 |
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| fish | 4,859 | 97.2% | 777 | 1,259 |
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| ungulate | 1,768 | 96.2% | 603 | 303 |
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| murine | 1,625 | 89.
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| murine | 1,625 | 89.0% | 466 | 158 |
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| carnivore | 484 | 99.6% | 164 | 0 |
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| other_mammal | 943 | 95.
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| other_vertebrate | 1,137 | 96.
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| other_mammal | 943 | 95.0% | 275 | 152 |
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| other_vertebrate | 1,137 | 96.2% | 327 | 129 |
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"Groove OK" includes both full-length and fragment parses. "Full" means both groove
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halves present (class I: α1 + α2, ~183 aa; class II: single chain's groove half with
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| UniProt | 20,566 | 500+ species | Curated diverse MHC, B2M, H-2 references (shipped in package) |
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| **Total raw** | **77,576** | | |
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| **After merge/dedup** | **55,696** | | One representative per two-field allele |
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| **Groove OK** | **54,
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| **Groove OK** | **54,155** | | 97.2% of representatives |
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### By species category
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|---|---:|---:|---:|---:|
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| human | 25,364 | 99.8% | 17,364 | 5,347 |
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| nhp | 7,125 | 98.0% | 4,582 | 1,429 |
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| bird | 9,312 | 99.
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| bird | 9,312 | 99.1% | 553 | 558 |
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| fish | 4,859 | 97.2% | 777 | 1,259 |
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| ungulate | 1,768 | 96.2% | 603 | 303 |
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| murine | 1,625 | 89.
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| murine | 1,625 | 89.0% | 466 | 158 |
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| carnivore | 484 | 99.6% | 164 | 0 |
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| other_mammal | 943 | 95.
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| other_vertebrate | 1,137 | 96.
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| other_mammal | 943 | 95.0% | 275 | 152 |
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| other_vertebrate | 1,137 | 96.2% | 327 | 129 |
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"Groove OK" includes both full-length and fragment parses. "Full" means both groove
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halves present (class I: α1 + α2, ~183 aa; class II: single chain's groove half with
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A0A1W5S5Z2,Egeu-UAA,Egretta eulophotes (Chinese egret),458089,359,I,alpha,False,bird_non_chicken,MGAGRALRLRLGLLLGALGALCGAASGLHSLRYFHVAVSEPSPGVPQFVTVGYVDGNPFVRYDSETRKKEPQAGWMAGSVDQGYWDRETQISQSNQEIYRVHLETLRGRYNQSRGAHTWQRMYGCDLLEDNSTRGYSQYAYDGRDYIAFDMDTMTFTAADEAAQITKRKWEEDGTVAERRKHYLKDTCIEWLRKYVSYGRAVLERKERPVVRVSGKEAHGTLTLSCRAYGFYPRPIRVSWLKDGEVRDQETERGGIVPNSDGTCYTWASIEARPEEKDKYRCRVEHASLGEPGLFVWEPESNLLTIVVAVAAAILAVITIIAGVVLWKHKSGKKKDYAKAPSTDGGSDSSTTGDPILRA
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A0A1W5S975,Egeu-UBA,Egretta eulophotes (Chinese egret),458089,356,I,alpha,False,bird_non_chicken,MGAGRALRLRLGLLLGALGALCGAASGLHSLRYFHVAVSEPSPGVPQFVIVGYVDGNPFVRYDSETGKVEPQAGWVRGAVDLPYLERSIQEVKHIDHMCLHILRGRYNQSRGAHTLQRMVGCDLLEDNSTKGYMQKGYDGRDFIAFDMDTMTFTAADAAAQITKRKWEVDGTEAERWKLYLKDTCIEWLRKYVSYGRAVLERKERPVVRVSGKEAHGTLTLSCHAYGFYPRPIRVSWLKDGEVRDQETERGGIVPNSDGTCYTWASIEARPEEKDKYRCRVEHASLGEPGLFVWEPESNLLTIVVAVAAAILAVITIIAGVVLWKHKSGKKKDYAKAPSTDGGSDSSTTGDPILRA
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A0A218U782,Lost-HA1F,Lonchura striata (white-rumped munia),40157,295,I,alpha,False,bird_non_chicken,MAPALRLGLLLGLLGLLADPGSTTKVLHSLHYLDVAVSEPSPGVPQYMEIGFVDGIPFTRYDSERGRAEPLTQWIKDGAEPGYWDRQTQIGVESQHVDARNLETLRERYNQSGGLHTRLHVYGCDLLSDGTVHGSYKDGYDGRDFISFDLGSGGFVAADSAAEITRRRWEQEEEAERWTNYLKHVCPEWLRKYVGYGQKELERKEPPDVHVSGKEEHGTLILSCHAYGFYPNTIAVSWMKENTTLXPKSGSILTVAVAVSIIAAILAVLIAVGVWKLQSGKRDRSGYNVAAGITA
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A0A218UA51,
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A0A218UA51,Lost-DRA,Lonchura striata (white-rumped munia),40157,249,II,alpha,True,bird_non_chicken,MAGARSVPRLLPLLALSLPALWGLPAEHSIVQTEFYQKSLGAAPDAEEFMFDFDGDEIFHVKDEETFWRLPEFQQFASFEAQGALQNIAIDKQNLESSMRAYNRSRVPSEPPEVAVFPKQPVEQDEPNILICSVTKFWPPALELRWLRNGAPVTRGVLETPFYPDRDFTFRKFSYLPFVPAPGDYYDCQVEHEGLAKPAKMHWEPQILVPPSEATETAICALGLAVGIVGIAAGTVLIIRGMKLGRARA
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1200
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A0A2Z4U0A8,Anpl-UAA,Anas platyrhynchos (Mallard) (Anas boschas),8839,354,I,alpha,False,bird_non_chicken,MGGALGLVLGLLLGVLGGAASEPHSVRYFHTAVSEPSPGVPQFVSVGYLDGEAFVYYDSETRRKEPRADWTSAIDDQQYWERNTRISQNNEQIYRVNLETLRERYNQSRGSHTWQRMYGCDLLEDGSVRGFDQYGYEGRDFIALDKDTRTFTAADAGAQITKGKWEEEGTFAETMKYYLENTCIEWLRKYVSYGKDVLERRERPEVRVSGMEADKTLTLSCRAHGFYPRPISIGWLKDGVVQEQETQRGSTVPNSDGTYHIWATIDVLPGDRGKYQCRVEHASLPQPGLFSWEPQSNLIPIVAGVSVAVAAVIAALAGFAVWKSKQGKKGKGYNKAPGSEGGSNSSNAGSNPSV
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A0A2Z4U0B2,Anpl-UAA,Anas platyrhynchos (Mallard) (Anas boschas),8839,354,I,alpha,False,bird_non_chicken,MGGALGLGLWLLLGVLGGAASEPHSLRYFDTGVSDPGPGVPRFVSVGYVDGHLIDHYDSETQRTEPRADWFAANTDQQYWDRQTEISRGAEQIFRLDLETLRERYNQSRGSHTWQLMYGCDLLEDGSTRGFRQYGYEGGDFVAFDKDTLTFTAADAGAQITKRKWEQEGTDAERWKFYLENTCIEGLRKYVSYGKDVLERRERPEVQVSGMEADKILTLSCRAHGFYPRPISISWLKDGMVQEQETKRGSTVPNSDGTYHIWATIDVLPGDRDKYQCRVEHASLPQPGLFSWEPQSNLIPIVAGVAVAVVAVIAALAGFAVWKSKQGKKEKGYNVAPGSDGGSNSSNAGSNPSV
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A0A2Z4U0B6,Anpl-UAA,Anas platyrhynchos (Mallard) (Anas boschas),8839,354,I,alpha,False,bird_non_chicken,MGGALGLGLGLLLGVLGGAASEPHSLRYFATAVSDPSPGVPQFVAVGYVDGEVFVRYDSETRRMEPRVDWIADNMDQQYWNGETENLRGAEQIYRVDLETLRERYNQSRGSHTLQLMFGCDLPEDRSISGFFQYGYEGREFIALDKDTWTFTAADAAAQITKRKWEEDGTVAERRKYYLENTCIEWLRKYVRYGKDVLERRERPEVRVSGMEADKILSLSCRAHGFYPRPISISWLKDGMVQEQETQRGSTVPNSDGTYHIWATIDVVPGDKDKYQCRVEHASLPQPGLFSWEPQSNLIPNVAGASVAVVAVIAALAGFAVWKSKQGKKEKGYNLTPGSDGGSNSSNAGSNPSV
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A0A8J4I796,Spme-DMB_1,Spheniscus mendiculus (Galapagos penguin),156760,242,II,beta,True,bird_non_chicken,FLVHVASSCPLAANGSVLDFDFTLIFNKNPLVCYDPDARHFVPCDWGLLRSCATHLATFLNNGTAWVERAEARRRACHDLAPQFLASTVLRRTPPQARIIPSKTGNARAPVLLTCHVWGFYPPEVTVIWLHNGDIVGPGDHPPISAVPNGDWTYQTQVTLMVAPVAGDTFTCSVQHASLDQPLLEDWGPGLSPGLTLKVAAATVVMVLGLGFFIAGVYRYQARPLALGEWSRRDRDGDSGLA
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A0A8J4JQB4,Eusc-DMB_1,Eudyptes sclateri (Erect-crested penguin),92688,246,II,beta,True,bird_non_chicken,VCPTPGDRGHPHVPLVGAFLVHVASSCPLAANGSVLAFGFALFFNKNPLVCYNPDARHFVPCDWGRLHLVARGVAAFLNNGTAWVQRAEDRRQACSDLATHFWASTALRRTPPQVRIVPVPLPNTPNAVLLTCHVWGFYPPEVTVSWLHNGDMVATGNTTKLLPNGDWTYQTQVTLTVTAKAGDTFTCSVQHASLDRSLQEDWGPGLSPGLTMKVVMAAVTMTLGLVIFAAGTFIYCRQAPGEGHA
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A0A8J4JQD3,Eusc-DMB_0,Eudyptes sclateri (Erect-crested penguin),92688,259,II,beta,True,bird_non_chicken,RSTPGDAAYPCVPLVGAFLVHMASSCPLAANGSVLDFDFALIFNKNPLVCYDPDARHFVPCDWGLLRSCATHLATFLNNGTAWVERAEARRRACHDLAPQFLASTVLRRTPPQARIIPSKTGNARAPVLLTCHVWGFYPPEVTVIWLHNGDIVGPGDHPPISAVPNGDWTYQTQVTLMVAPVAGDTFTCSVQHASLDQPLLEDWRPGLSPGLTLKVAAATVVMVLGLGFFIAGVYRYQARPLAPGEWSRRDRDGDSGLV
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A0A8J4JV95,Eusc-DRA,Eudyptes sclateri (Erect-crested penguin),92688,245,II,alpha,True,bird_non_chicken,MAVSVAAPDAGLLAAGNTIHHAEFQQRVEPLQQEVGEFQEAFDADEVFHVDLQKQETVWRLPKFGSFASFEAQGALQNMAVAKQNLEIMMERSNRSQATIVPPEVTVFSEDPVELGDPNVLICYVDKFWPSIISITWLRNGQEVTDGVFETVFYPREDHSFRKFSYLPFIPTRGDYYDCRVKHEGLSAALLKHWEPQVPLPVSESTETLVCALGLAVGIVGIIVGTILIIKAMKMNGTRNQRGLL
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A0A8J4K203,Eumi-DMB,Eudyptula minor (Little blue penguin) (Aptenodytes minor),37083,259,II,beta,True,bird_non_chicken,RSTPGDAAYPCVPLAGAFLVHMASSCPLAANGSVLDFDFTLIFNKNPLVCYDPDARHFVPCDWGLLRSCATDLATFLNNGTAWVERAEARRRACHDLAPQFLASTVLRQTPPQARIIPSKTGNARAPVLLTCHVWGFYPPEVTVIWLHNGDIVGPGDHPPISAVPNGDWTYHTQVTLMVAPVAGDTFTCSVQHASLDQPLLEDWGPGLSPGLTLKVAAATVVMVLGLGFFIAGVYRYQARPLAPGEWSRRDRGGDSGLA
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A0A8J4K9L7,Eumi-HA1F_CHICK_0,Eudyptula minor (Little blue penguin) (Aptenodytes minor),37083,109,I,alpha,True,bird_non_chicken,LKNGTVRDHETERGSIVPNSDGTYYAWASIEARPEDKDKYRCRVEHASMREPGLFAWEPESNLFTIVLAVVVAIVAVIIIIAGIAFWKCKSGKAPGPARQRGGGGRQGL
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A0A8J4KCR6,
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A0A8J4KCR6,Eumi-DRA,Eudyptula minor (Little blue penguin) (Aptenodytes minor),37083,229,II,alpha,True,bird_non_chicken,NVIIQAEFYQRDERLQQEGGEFMFDFDGDEIFHVDLQKTETVWRLPKFGSFASFEAQGALQNMAVDKQNLEIMMKRSNRSQATIVPPEVTVFSEDPVELGDPNVLICYVDKFWPSMISITWLRNGQEVTDGVFETVFYPREDHSFRKFSYLPFIPTRGDYYDCRVKHEGLSAALLKHWEPQVPLPASESTETLVCALGLAVGIVGIIVGTILIIKAMKMNGTRNQRGLL
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A0A8J4KI71,Euch-DMB,Eudyptes chrysocome (Western rockhopper penguin) (Aptenodytes chrysocome),79626,259,II,beta,True,bird_non_chicken,RSTPGDAAYPCVPLVGAFLVHVASSCPLAANGSVLDFDFALIFNKNPLVCYDPDARHFVPCDWGLLRSCATHLATFLNNGTAWVERAEARRRACHDLAPQFLASTVLRRTPPQARIIPSKTGNARAPVLLTCHVWGFYPPEVTVIWLHNGDIMGPGDHPPISAVPNGDWTYQTQVTLMVAPVAGDTFTCSVQHASLDQPLLEDWSPGLSPGLTLKVAAATVVMVLGLGFFIAGVYRYQARPLAPGEWSRRDRDGDSGLA
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A0A8J4KZY8,Euch-HA1F_CHICK_2,Eudyptes chrysocome (Western rockhopper penguin) (Aptenodytes chrysocome),79626,126,I,alpha,True,bird_non_chicken,AAPQPRLPGRVSGAHTLQEMYGCDLLEDGRTSGFYQMAYDGRDFIAFNMGTMTFTAADVVAQITKKKWEDEAVAERRKQYLENICIEVLRKYVSYGHAVLEKKELPTVRVSGKEAHGTLTLYCRAY
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A0A8J4L5T9,Euch-HA1F_CHICK_0,Eudyptes chrysocome (Western rockhopper penguin) (Aptenodytes chrysocome),79626,109,I,alpha,True,bird_non_chicken,LKNGEVRDHETERGSIVPNSDGTYYAWASIEARPEDKDKYRCRVEHASMREPGLFAWEPESNLFTIVLVVVVAIVAVIIIIAGFAFWKYKSGKAPGPARQRGGGGRQGL
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A0A8J4NLC0,Eumi-HA1F_CHICK_1,Eudyptula minor (Little blue penguin) (Aptenodytes minor),37083,126,I,alpha,True,bird_non_chicken,AAPQPRLPGRVSGAHTLQEMYGCEILEDGRTSGFYQAAYDGRDFIAFDMGTMTFTAADAAAQITKRKWEDEGVAERRKQYLESTCIEWLRNYVSYGQAALERKEPPTVRVSGKEAHGTLTLYCRAY
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A0A8K0B7R1,Eufi-DMB_0,Eudyptes filholi (Southern rockhopper penguin),1419345,259,II,beta,True,bird_non_chicken,RSTPGDAAYPCVPLVGAFLVHVASSCPLAANGSVLDFDFALIFNKNPLVCYDPDARHFVPCDWGLLRSCATHLATFLNNGTAWVERAEARRRACHDLAPQFLASTVLRRTPPQARIIPSKTGNARAPVLLTCHVWGFYPPEVTVIWLHNGDIVGPGDHPPISAVPNGDWTYQTQVTLMVAPVAGDTFTCSVQHASLDQPLLEDWSPGLSPGLTLKVAAATVVMVLGLGFFIAGVYRYQARPLAPGEWSRRDRDGDSGLV
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7048
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A0A8K0B8J0,Eufi-DMB_1,Eudyptes filholi (Southern rockhopper penguin),1419345,246,II,beta,True,bird_non_chicken,VCPTPGDGGHPHVPLVGAFLVHVASSCPLAANGSVLAFGFALFFNKNPLVCYNPDARHFVPCDWGRLHLVARGVAAFLNNGTAWVQRAEDRRQACSDLATHFWASTALRRTPPQVRIVPVPLPNTPNAVLLTCHVWGFYPPEVTVSWLHNGDMVATGNTTKLLPNGDWTYQTQVTLMVTAKAGDTFTCSVQHASLDRSLQEDWGPGLSPGLTMKVVMAAVTMTLGLVIFAAGTFIYCRQAPGEGHA
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|
-
A0A8K0FFQ5,
|
|
7049
|
+
A0A8K0FFQ5,Eufi-DRA,Eudyptes filholi (Southern rockhopper penguin),1419345,229,II,alpha,True,bird_non_chicken,NVIIQAEFYQRDERLQQEGGEFMFDFDGDEIFHVDLQKTETVWRLPKFGSFASFEAQGALQNMAVDKQNLEILMKRSNRSQATIVPPEVTVFSEDPVELGDPNVLICYVDKFWPSIISITWLRNGQEVTDGVFETVFYPREDHSFRKFSYLPFIPTRGDYYDCRVKHEGLSAALLKHWEPQVPLPVSESTETLVCALGLAVGIVGIIVGTILIIKAMKMNGTRNQRGLL
|
|
7050
7050
|
A0A8S9EH41,Eumi-HA1F_CHICK,Eudyptula minor novaehollandiae (Australian little penguin),2052820,109,I,alpha,True,bird_non_chicken,LKNGTVRDHETERGSIVPNSDGTYYAWASIEARPEDKDKYRCRVEHASMREPGLFAWEPESNLFTIVLAVVVAIVAVIIIIAGFAFWKYKSGKAPGPARQRGGGGRQGL
|
|
7051
7051
|
A0A8S9EYI1,Eumi-DMB,Eudyptula minor novaehollandiae (Australian little penguin),2052820,259,II,beta,True,bird_non_chicken,RSTPGDAAYPCVPLAGAFLVHVASSCPLAANGSVLDFDFTLIFNKNPLVCYDPDARHFVPCDWGLLRSCATDLATFLNNGTAWVERAEARRRACHDLAPQFLASTVLRRTPPQARIIPSKTGNARAPVLLTCHVWGFYPPEVTVIWLHNGDIVGPGDHPPISAVPNGDWTYHTQVTLMVAPVAGDTFTCSVQHASLDQPLLEDWGPGLSPGLTLKVAAATVVMVLGLGFFIAGVYRYQARPLAPGEWSRRDRGGDSGLA
|
|
7052
|
-
A0A8S9F2M1,
|
|
7052
|
+
A0A8S9F2M1,Eumi-DRA,Eudyptula minor novaehollandiae (Australian little penguin),2052820,210,II,alpha,True,bird_non_chicken,GEFQEAFDADEVFHVDLQKQETVWRLPKFGSFASFEAQGALQNMAVDKQNLEIMMKRSNRSQATIVPPEVTVFSEDPVELGDPNVLICYVDKFWPSMISITWLRNGQEVTDGVFETVFYPREDHSFRKFSYLPFIPTRGDYYDCRVKHEGLSAALLKHWEPQVPLPASESTETLVCALGLAVGIVGIIVGTILIIKAMKMNGTRNQRGLL
|
|
7053
7053
|
A0FCL6,Nume-BLB2,Numida meleagris (Helmeted guineafowl) (Phasianus meleagris),8996,88,II,beta,True,bird_non_chicken,FFQWSLRAECHYLNGTERMRLVARQIYNRQEFTHFDSDVGKYVADAPLGEPQAEHYNSNPEILENQMNQVDTFCRHNYGVLESFTVQR
|
|
7054
7054
|
A0JCK8,Coja-DBB1,Coturnix japonica (Japanese quail) (Coturnix coturnix japonica),93934,157,II,beta,True,bird_non_chicken,MGSGRVPAAVAVLVALLALGARSAYGTRPSAYFQFYARSECQFLNDTERVRFVVGYIYNRQQYTHFDSDVGKFVADTPLGELQAEHYNSQTEYLEYTRGAVDTYCRHNYGVFESITVQRSVQPKVRVSALQSGSLGESDRLACYVTGFYPPEIEVKW
|
|
7055
7055
|
A0JCK9,Coja-DBB1,Coturnix japonica (Japanese quail) (Coturnix coturnix japonica),93934,157,II,beta,True,bird_non_chicken,MGSGRVPAAVAVLVALLALGARSAYGTRPSAYFHHSAQTECHFLNGTQRVRLTQGYIYNRQQFAHFDSDVGKFVADSTLGESWAEDVNSQTEFLEYLRGAVDTSCRYNYGVGESFTVQRSVQPKVRVSALQSGSLGESDRLACYVTGFYPPEIEVKW
|
|
@@ -11810,7 +11810,7 @@ A0A8M2BIB4,Dare-mhc1zea,Danio rerio (Zebrafish) (Brachydanio rerio),7955,345,I,a
|
|
|
11810
11810
|
A0A8M3AVG2,Dare-mhc1lba,Danio rerio (Zebrafish) (Brachydanio rerio),7955,355,I,alpha,False,bony_fish,MKTMLFLLYLLSCLTFTDAGFHSLLVLATYVDGQTPFPELSVVVMLDDVQIIYYDSDTWRVFHRSPSDSKYYDEDQSDADAVFHDTYDEMKYRVLHLKNQLNHTDGITVLQRIVGCELFNDKPGIYHLWDAHDGKTIEKFTFNIYNHEFQLKNQWFRTWDQVMIQQKRIVHENIYYPVCIKVLRRYLNVEKNSVMRKVKPRVRLMKKKLPDSQGLQISCLATGFYPRHINLTLFRDAEPVDDDQIIGGEILPNGDGMYQMRKSLIVSKEELDEGHEYTCTMKHLNLDNKLDIVFDVSGTVPGCFSVSVVISVLVFMCVSVFIITKLIMRRKRQDTGRGSEKCDYSPTISSSQDEI
|
|
11811
11811
|
A0A8M9PVE6,Dare-mhc1ula,Danio rerio (Zebrafish) (Brachydanio rerio),7955,281,I,alpha,False,bony_fish,MKEYASEEIWKEDCKIRGDVHQIYRSNINVLMQRFNQSNGVHVYQRMYGCDWDEETEESHGFDQYGYDGEDYVMLDMREIRYITPVQQGEITVQKWNSNREQLKTLQHYYKYECVYWLKQFLGLRKADLEIRDPEVFLLQKNPSSPVECFATGFYPSGVIITWLKNGQDHGENVELRELKPNEDGTFQRSSSLHVSQEDWKKSLYTCVVEHQRMTIQKSGDEIKSNSSSEVFITPERVLAILLAALVICLCICYLVYPKKLKPYQPVNQNEEMYEYIVKNE
|
|
11812
11812
|
A0A8M9QF35,Dare-mhc1zda,Danio rerio (Zebrafish) (Brachydanio rerio),7955,349,I,alpha,False,bony_fish,MGLLDDRQIDYYNSQDQKKIPKQHWMKEKMQEDYWEKGTQSRKSKEQWFNVNVNILMDRMRHNKSDLHVLQWRHGCEIDSQDDDVRFSKGIDEYSYDGENFLSFDDADSQWVAPVDAALPTKRKWDNVPILNQYTKGYLEKECVDWLNKFREYGNEELREGSPPDVHVFARSIINGKAKLKLTCLATGFYPKDVYLTIRKYRMALLDKDLESSGVRPNHDGTFQLRMSTYIYEDEKAEYDCYVKHRTLGAPIIKKWDGKCSDCSKVTFLGMIVGAIIGAVFVLTVIGLVILVLTRKKAPKKPFYKNGIGDNDPSAIPLNNNQHIEPSVKESKNKPTAAEGQSTGGDLKS
|
|
11813
|
-
A0A8T2KPG8,
|
|
11813
|
+
A0A8T2KPG8,Asme-A,Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus),7994,321,I,alpha,True,bony_fish,SLKEGLFIFFISGSHSLQYSYTVVSPGTNLPEFTAVGQLDGEQIVYYDSNISEIIPKTEWIKNVDDYAEYWNEETTRLQCDQQRAIDDLTRAVQFSNHTEGVHTFQSVYGCEKDDDGTERGYKRNSFDGDDYISLDLNTETYNAVVPEAVPNKWLERADTVRNQKAYLLNECIELLQKYVKYGRSTLERKVRPEVSVFQKNSSSPVVCHATGFFPKSVNISWQKNGEELNEDVELREMLPNQDGTFQKRSILTVSPEELKNNNYTCVIQHSSLEKELVLRVSDRGDGVSVGVIIGVVVAVLLLVFIACFGVFSIWKKKSGK
|
|
11814
11814
|
A0A8T2KSB7,Asme-H2-Q10,Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus),7994,204,I,alpha,False,bony_fish,MCNVINLYDCVCRGSHSAGDGYFQLGYDGDDFISLDLNTKTWTAATLQAVITKLNWERKGDTSYPKNYLENTCVEWLLKYVSYGRSTLERKEVSVFQKDSSSPVVCHATGFFPKAVMISWQKNGEELNEDVELRETLPNQDGTFQKRSILTLTPEELKNNKYSCVVQHSSLEKNLVLQVSNRRILQGRRDLKCLIISKMILLAT
|
|
11815
11815
|
A0A8T2KUJ0,Asme-H2-Q10,Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus),7994,362,I,alpha,False,bony_fish,MIKTLIFLTFTLQLTSAATHSLQFFLTTVTPVISIPEFTAVGQVDAEQAEYYDSNNRTVVLKVSWLNKSDDAEHWEMKLHHAANQEAFSKSIMAVALKVFNQAEKGLHTLQTTIGCQLDDNGSRRGFAQFGYDGDDLLTLDLKSETWIAAVPQILPFINSSSSAQGTKQFILYQCIDCLLMYVEFGKSVLERKDPPEVSVFQKDSSSSVVCHATGFFPKAVMISWQKNGEELNEDVELRETLPNQDGTFQKRSILTLSPEELKNNNYTCVIQHSSLKKELVLLVSDHKVLSGNGVSVGLIVGVMVGALLLVIIICAAVFIWKRRSSGVSPDSVNFRSRVTPVSVSCISDSPTPSPCPDVVAA
|
|
11816
11816
|
A0A8T2KV66,Asme-CD1B3,Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus),7994,142,I,alpha,False,bony_fish,MYIYIFFNYFPVPEVRIFQQKKRAGSVTVTCHVTGFYPREVQVIWLGSDLQPVDEGVTEILPNDDGTYQTRQSVIVPEEDVGKQNYSCVVLHISIPNNITTVWVGQKCGGFALWIPLVCISLLACGTGFGVWWRCQTRDAVI
|
|
@@ -11832,7 +11832,7 @@ A0A8T2MHD5,Asme-E,Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexic
|
|
|
11832
11832
|
A0A8T2MHV4,Asme-AZGP1,Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus),7994,230,I,alpha,False,bony_fish,MNPLFYFCFSTDKHSLLYLYTMQSKTSTIYDCTAVTLLNDRQIDFYNSSSDKPRTAKQNWLMNISESDWIISTEKLQYDTQLLNMLIVTQINEFRNSHSGVHVLQWRHGCEGEQSSDGSLTVLNSINEFGYDGEDLIQFNCTSKTWITPEEEKNREREEEKNREREEEKNREREEENREREEEKNREREEKWSKIFNAVRKCEQCEEMLKMYLKYKTTDITQSHSEYPWW
|
|
11833
11833
|
A0A8T2MIQ8,Asme-H2-L,Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus),7994,270,I,alpha,True,bony_fish,EKHSLYYIYSALNKDVSLPGIYEFTALGLLDDREIDYYNSKEDYWEKGTQSRKSKEQWFKVNVEILMQRMNHNLHVLQWRHGCEIDESNGEVKFLNGIDQYSYDGSDFLSFDNSHRVWVAPVPAAEPTKRKWDGVSILNQYTQGYLEKECVAWLTKFMEQTGSVVLFSAPPDVHAFAKQSVKDPKKVSLTCLITGFYPKDVKLSVRKFGTSIPEHLIISSGIRPNDDGTYQLRKSVEISGDDPADYDCYVSHSSLTEPVMKKWGNYNCDW
|
|
11834
11834
|
A0A8T2MKX3,Asme-AMEX_G4214,Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus),7994,296,I,alpha,True,bony_fish,GLCLFAPDEHSLFYIYTALNKDLDLPGIYEFTALGLLDDREIDYYNSKEQKKIPKQSWMMEKMQEDYWEKGTQSRKSKEQWLKVNMDILMQRMNHSNQDLHVLQWRHGCEVDESNGEVKFLRGISEYGYDGSDFLSFDDENMRWIALVQAAEITKRKWDDVAILNHYTKGYLEKECVDWLTKFMEYGKETLRKHCEFLSHVFAKKSVRDSRKLTLTCLITGFYPKDVKMSLRKFGTSFPDHLITSSGIRPNDDETYQLRKSVEISGDDPADYDCYVSHSSLTEPEIKKWGNYNCDW
|
|
11835
|
-
A0A8T2MKY5,
|
|
11835
|
+
A0A8T2MKY5,Asme-E,Astyanax mexicanus (Blind cave fish) (Astyanax fasciatus mexicanus),7994,328,I,alpha,False,bony_fish,MTSAIDRLLKIDEHSLYYLHTSQFKHNDSIHEFTALTLLDDVQIDFYNSTDGVRTPKQDWLKEINGSDWERGSAELRDNGQYLNFLLNKQMMVFGHIESGDHILHWKYGCEAVEHQNGSMTVFSFTNDYSYDGENFISYDWNLQLWSASVKQAYETEKKWNTEHHQNRVLQTCVDWLKIYLKKSPEIEKKPPVVSMFITSSPPGPNLDSLTCVATGFYPKYLKMILRISGVPISEDQIKSTGVRPSGDGTYNLSKTVEVLGHEKFEYDCYVTHSSLEEPIIKNVRWIYWLVGGVFPLAMIILIVCIHHQEKIMDACEEISWCCCCIEY
|
|
11836
11836
|
A0AA47MNJ0,Mepo-A_0,Merluccius polli (Benguela hake) (Merluccius cadenati),89951,144,I,alpha,False,bony_fish,MEREAGSQGSSKQAGQRSSSNSMEMKALIGLLLLVGCHGVSSVIHSLKMFYTASSGVSNFPEFVYVAMLDELQIHYYDSNSQKVEVKQSWMDQRPREELERDTRNLQGQQQVSKANIETLKQRFNQTGGQFISHVSPLMEISAF
|
|
11837
11837
|
A0AA47MNP4,Mepo-HA1Z,Merluccius polli (Benguela hake) (Merluccius cadenati),89951,188,I,alpha,False,bony_fish,MAFQSGASTALFTSHQRPEVSLLQRSPSSPVVCHATGFYPDRVVVFWRRDGEELYEHVDHGEVLPNPDGTFQVSVDLDLASVPREDWRRYECVVQLKGIEDISTRLDPALVRTNWGRGGGNDITTIIIIIIAVLAAAAAAAAAAGVVVYKKRNCSAKSRPAGSHSSSGNSEELNPAPEAEPLNTDSSL
|
|
11838
11838
|
A0AA47MUU5,Mepo-H2-K1_0,Merluccius polli (Benguela hake) (Merluccius cadenati),89951,130,I,alpha,False,bony_fish,MKAGGLVVLLGLCHGVSSVIHSLKYFHTASSGVSNFPEFVAVGMVDELQFIYYDSNSQKAEFKQSWMDQLTRDDPQYLERNTGYYLRAQQTNKVNIETAKRRFNQTGGMFIHTHTHTHTHLIILYLSPHL
|
|
@@ -11855,7 +11855,7 @@ A0AAD5FFV1,Sias-C0J50_8822,Silurus asotus (Amur catfish) (Parasilurus asotus),30
|
|
|
11855
11855
|
A0AAD5FH59,Sias-C0J50_8824,Silurus asotus (Amur catfish) (Parasilurus asotus),30991,182,I,alpha,True,bony_fish,LCTDPHSLQYLHTGLPPGTHFPEFTAVGQKDGQQFVYYDSNISRMIPKTQWIQKISADDADYWNRETQKQHVNQEIFKLYLADVIKQKFNQTEGVHTLQRMYGCEIDGNGTTRGYDQYGYEGEDFFSLDLNTGSWTAVNDEAEIFIKRWDPRRSEAEYWRNFLETECIDWIKKFVSMGRKGV
|
|
11856
11856
|
A0AAD5FTF0,Sias-C0J50_8448,Silurus asotus (Amur catfish) (Parasilurus asotus),30991,278,I,alpha,True,bony_fish,QHSLFYTYTYLSQPLNLPGIHEFIALGMLDDRVIDYYDSETQVKVPKQDRMKEKMPQDYWEKGTQSRKSKEQWFKVNLEILMERMRHNKTDLHVLQWRHGCVVDEGANGSLKFVRGISEYAYDGTEFLSFDTENSRWIASVQAAEPTKKKWDEVPILNQYTKGYLEKECVDWLSKFMEYGKVEQNTIVTPVVHQFAKKSVTDSSKRTLSCLATNFYPEDVQMHLRKSRTFLPEHLVTSSAIRPNGDGTYQLRKSVEIMQDEEPLYDCYVTHSTTELPI
|
|
11857
11857
|
A0AAD5FTL8,Sias-C0J50_8449,Silurus asotus (Amur catfish) (Parasilurus asotus),30991,281,I,alpha,True,bony_fish,HTLFYTYTALSYPLELPGIYQFTALGMLDDRELDYYSSKTQLKVPKQNWMKAKMPQDYWEKGTQSRKSKEQWFKVNVDILMDRMRHNKTDLHVLQWRHGCIVDKDADGNLTFVKGIDEYSYDGSEFLSFDGENSRWIAPVQAAELTKRKWDEVPILNQYTKGYLEKECVDWLSKFMEYGQEELKLFSKPKVYMFVNKSVKDPSMLTLTCLATGFYPPDVQMQVIKYRTSLPEHLLTCSGVRPNGDNTYQLRKSVDIKPEDRTQYKCQVTHNMLQTVIRING
|
|
11858
|
-
A0AAD8CF21,
|
|
11858
|
+
A0AAD8CF21,Acox-DQB1,Acipenser oxyrinchus oxyrinchus,40147,266,II,beta,False,bony_fish,MEASSLQISSLYTRCLRGLVLLSLMLCCKKNSFGVDGYMMQMIRDCEYSDSSMTDMMYSRRYVFNKQEFIHYDTKIQKYVGNTACGVKNAEEWNKDKARLAGLLGEVDQYCKYNINLYKPGTIDYKEKPFVRIRSNKMSSSRHQTMLVCYVIGFYPREIKVTWLRNGAKVTADVSSSELLPDGDWTYQIHSYLELTPKSGDSYTCRVEHSSLAEGYRGESGEEGYRSHFGAIRLRFLKWRLNRILWSLVHTLKGWTEDLQFYYIQF
|
|
11859
11859
|
A0AAD8CPK7,Acox-Hfe,Acipenser oxyrinchus oxyrinchus,40147,158,II,beta,True,bony_fish,LPRKARESAGTDVICHVTGFYPREVEVNWIRDSEALLEEGVWSGEVLPNEDRTYQLRKTLTVSPEDQKKHSYSCQVDHASLDEKMDVKWVPEAALNMGFVAAGVLAALGLTIAVIIGARIWKKRASAKEQSDASSNSSNSTNGDRCDSIAEKLMTQTE
|
|
11860
11860
|
A0AAD8FU48,Acox-Hfe,Acipenser oxyrinchus oxyrinchus,40147,172,II,beta,True,bony_fish,SPVRPAVTLIQRGKLESAGTDVICHVDGFYPREVEVNWIRDGEALLEEGVWSGEVLPNEDRTYQLRKTLTVSPEDQKKHSYSCQVDHSSLDEKMDVKWVPEAALNMGFVAAGVLAALGLIIAVIIGALIWKKRASAKEQSDASSNSSNPTNSDRCDPIAKKLMTQEENKQLS
|
|
11861
11861
|
A0AAV2MF16,Knca-KC01_LOCUS38371,Knipowitschia caucasica (Caucasian dwarf goby) (Pomatoschistus caucasicus),637954,111,I,alpha,False,bony_fish,MLSLSRVGFDRCDGSGAQVQMVWFSNTGTDGMVREHRYRRYGSVTQVQTGWIGSTVTDGMVWDREHRYRRDGRSESNQFHRRLQVLVEWSGVRLQNPLLRAVTTVSRLWLA
|
|
@@ -15687,7 +15687,7 @@ Q6WGJ6,Taac-DZB,Tachyglossus aculeatus (Short-beaked echidna) (Myrmecophaga acul
|
|
|
15687
15687
|
Q6WGJ7,Oran-DZB,Ornithorhynchus anatinus (Duckbill platypus),9258,266,II,beta,False,monotreme,MASLLVPWSLWAAAVAVALMVLTSPGAGGPETPEHFLIQEKFGCYFHNGTERVSYVHKHIYDRQEIARFDNDVGVYVAVTELGRPDAQYWNSLQDFLDEKRTEVDRVCRHNYGGIDGFSVQRRVQPTVKVSQTNAKPLEQHQTLTCSVMGFYPGDIQVQWLRNGQEQKDGVVHTDLMRHGDWTFQVLVILEMTPRSGDVYVCQVEHGSLQEPITVEWRAQSESARSKMLSGVGSLVLGLVFLAVGLTVHFKGRKGHTVSQPAGLLS
|
|
15688
15688
|
A0A125R585,Ptal-N,Pteropus alecto (Black flying fox),9402,368,I,alpha,False,bat,MQVMGPRTLLLLLSGALALTETWAGFHSLRYFYTAWSRPGSGEPRFVAVGYVDDTQFVRFDSDNASPRAEPRAPWMDLVEQQDPQYWDRNTRNARDAAQTYRVGLDNVRGYYNQSEAGSHTIQRMYGCDVGPHGRLLRGYDQLAYDGADYIALNEDLRSWTAADLAAQNTRRKWEEAGYAERDRAYLEGECVEWLLKHLENGRETLLRADPPKTHITHHPISDREVTLRCWALGFYPEEITLTWQHDGEDQTQEMELVETRPDGNGAFQKWAALVVPSGEEQRYTCHVQHEGLPQPLTLRWEPPPPATIPIVGVIAALVLLGVVVLGAVFGAVMWRRKRSGGKGGIYVQAANTDSAQGSDVSLTASKA
|
|
15689
15689
|
A0A671ENM6,Rhfe-DRA,Rhinolophus ferrumequinum (Greater horseshoe bat),59479,254,II,alpha,False,bat,MAIIGVSMLGFFITVLLMSLQESWAIKENHVIIQAEFYMTPDPSGEFMFDFDGDEIFHVDMEKKETVWRLEEFGRFASFEAQGALANIAVDKANLDIMIKRSNHTPITNVPPEVTVLPNKPVELGEPNILICFIDKFSPPAINVTWLQNGKPVTTGVSETVFLPTKEHLFRKFHYLPFLPSTEDVYDCKVEHWGLQEPLLKHWEFEAQTPLPETTENVVCALGLVVGLVGIIAGTIFIIKGVRKGGAAERRGPL
|
|
15690
|
-
B2KID6,
|
|
15690
|
+
B2KID6,Rhfe-A1,Rhinolophus ferrumequinum (Greater horseshoe bat),59479,341,I,alpha,False,bat,MTYFYTTWSRPGRGEPRFIAVGYVDDTQFVRFDGDAASPRMEPRAAWMEGPWVEQVEPGYWDRNTQACKGQAQADRVSLNTLRGYYNQSDAGSHTIQMMYGCDVGPDGRLLRGYEQHAYDGADYIALNEDLRSWTAAATAAQITRRKWEAAHYAEQLRGYLEGLCVESLGKYLEKGKEALLRADPPKTHVTHHRTSGSDVTLRCWALGFYPAEITLTWQRDGEDLTQDTELVETRPAGDGTFQKWAAVGAPSGEEQRYTCHVQHEGLPEPLTLRWEPPPQATISIAMVVGIIAGLVLLGAVITGAVLWRRKRSGGKRGSYSQAAGGDSAQGSDVSLTASKA
|
|
15691
15691
|
A0A671DWX3,Rhfe-PRR3,Rhinolophus ferrumequinum (Greater horseshoe bat),59479,166,I,alpha,False,bat,MPKRKKQNQQQQPPQQQLPLLKREKTEDEEDGIPIALHRGPPGSRGPVIPPLLSLPPPSRGRGPVWGGLGPRFGPYGRGWWGINAEPPVPGPSHGPSRGGFHKEQRHPRRLKSWSLVKNTCPPKDGPQVKEDKSDRPVCRHFAKRGHCRYEDLCAFYHPGVNGPPL
|
|
15692
15692
|
A0A671DXJ0,Rhfe-PRR3,Rhinolophus ferrumequinum (Greater horseshoe bat),59479,187,I,alpha,False,bat,MPKRKKQNQQQQPPQQQLPLLKREKTEDEEDGIPIGPPSLLGPPPMANGKPGDPKSALHRGPPGSRGPVIPPLLSLPPPSRGRGPVWGGLGPRFGPYGRGWWGINAEPPVPGPSHGPSRGGFHKEQRHPRRLKSWSLVKNTCPPKDGPQVKEDKSDRPVCRHFAKRGHCRYEDLCAFYHPGVNGPPL
|
|
15693
15693
|
A0A671EQH7,Rhfe-DQB1,Rhinolophus ferrumequinum (Greater horseshoe bat),59479,268,II,beta,False,bat,KSGTMALWIPRGLWTAAVMVTLVVLSAPVTEGRDSPQDIVLQFKCRCYFTNGTQRVRYVTRFVYNREEFARYDSDVGEYRAVTERGRPDAEYWNSQKDVLEQTRAELDTVCRHNYELETFPILKRRVEPTVTISPSKTEVLNHHNLLVCSVTDFYPGHIKVRWFRNDQEETAGIVSTPLIRNGDWTFQILVMLETTLQRGDVYTCHVEHVSRQSPITVEWRAQSESAQSKMLSGLGGFVLGLLFLGLGLIIRHRRQKGLRGPLPGLLR
|
|
@@ -15949,13 +15949,13 @@ B2ZTF1,RLA-DQA,Oryctolagus cuniculus (Rabbit),9986,82,I,alpha,True,other_mammal,
|
|
|
15949
15949
|
B2ZTF4,RLA-DQA,Oryctolagus cuniculus (Rabbit),9986,82,I,alpha,True,other_mammal,DHVGSYGINVYQSYGPSGQYTHEFDGDEQFYVDLDKKETIWRLPEFSRFASFDPQGALGNIATEKYNLDIIIKRSNSTAAVN
|
|
15950
15950
|
B2ZTF6,RLA-DQA,Oryctolagus cuniculus (Rabbit),9986,82,I,alpha,True,other_mammal,DHVGSYGINVYQSYGPSGQYTHEFDGDEEFYVDLDKKETVWSLPMFRKFRSFDPQGALGNIATIKYNLDIMIKRSNSTAAVN
|
|
15951
15951
|
P15464,MHC-I,Spalax ehrenbergi,30637,258,I,alpha,False,other_mammal,MMVLPVPVAPWTAALTVLLMVLNKSVVQGRTTPENYLFRAWQECHLTHGRYRYVERYIYNQEEYVRFDSDVGVFRAVTELGRSWADDFNSRKEALEQKRAAPDTGCRHNHELNQRLSQSLIAQPKVHVSPSKGGTLNHHNLLVCQVTDFYPGNIQVRWFRNNQEETTGISTTNPIRNGDWTFQILVTLEMTPQRGDVYTCHVEHPSLDRPITVEWRAQSDSARNKTLTGVGGLVLGLIFLAVGLIMHVRSKKAQRGSR
|
|
15952
|
-
A0A8C6A180,
|
|
15952
|
+
A0A8C6A180,Mama-DRA,Marmota marmota marmota,9994,254,I,alpha,False,other_mammal,MARSEVMVLGFFFMAVLMSPQESWAIKEDHTIIQAEFYLHPDELGEYMFDFDGDEILHVDSKIKETVWRLKEFGQFASFEAQGALANLAVDKANLDIMMKRSNNTWDSNVPPEVTVLSSGPVELGEPNVLICFIDKFSPPVVNVRWLKNGQPVTTGVSETVFLPRKDQLFRKFHYLPFLPSNEDFYDCEVDHLGLERPLLKHWAFEEQTSLPETKENVVCALGLLVGLVGIIMGTIFIIKGTQKSHTGERRGPL
|
|
15953
15953
|
A0A8C6GVZ0,MHC-I,Mus spicilegus,10103,255,I,alpha,False,other_mammal,MATIGALVLRFFFIAVLMSSQKSWAIKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSETIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNTPDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVTWLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDFYDCEVDHWGLEEPLRKHWEFEEKTLLPETKENVVCALGLFVGLVGIVVGIILIMKGIKQRNVVERRQGAL
|
|
15954
|
-
A0A8D2B106,
|
|
15955
|
-
A0A8C2VDW4,
|
|
15956
|
-
I3MFG2,
|
|
15957
|
-
A0A8D2IJ01,
|
|
15958
|
-
H0VL53,
|
|
15954
|
+
A0A8D2B106,Scvu-DRA,Sciurus vulgaris,55149,254,I,alpha,False,other_mammal,MARSEVMVLGFFFMAVLMNAQESWAIKEEHSIIQAEFYLSPDQKGEFMFDFDGDEIFHVDIEKKETIWRLEEFGQFASFEAQGALANIAVDKANLDIMIKRSNHTSDSNVPPEVTVLSSGPVELGEPNVLICFIDKFSPPVVNVRWLKNGEPVTKGVSETVFLPRKDQLFRKFHYLPFLPSNEDFYDCEVDHLGLDRPLLKHWEFEEQTPLPETKENVVCALGLVVGLVGIVVGTIFIIKGMRKNPTAERRGPL
|
|
15955
|
+
A0A8C2VDW4,Chla-DRA,Chinchilla lanigera,34839,254,I,alpha,False,other_mammal,MAMRGGLVLEVFLIAVLMRPQGSWAIKEEHKIIQAEFYMSPDEAGEFMFDFDGDEIFHVDLQNQQTVWRLEEFGQYASFEAPGALANIAVDKANLGIIMERSNNTPDTNVPPEVTVLSHGPVELGEPNVLICFIDKFSPPVISVTWLKNGKPITTGVSSTVFLPRDDHLFRKFHYLPFLPSTEDVYDCKVEHLGLDQPLLKHWEFEERSPLPETTETVVCALGLIVGLMGITVGTVLIIKGMGRRNTARPQRPL
|
|
15956
|
+
I3MFG2,Ictr-DRA,Ictidomys tridecemlineatus,43179,254,I,alpha,False,other_mammal,MARNEVMVLGFFFMAVLMSPQESWAIKEDHTIIQAEFYLHPDELGEFMFDFDGDEIFHVDSKIKETVWRLKEFGQFASFEAQGALANLAVDKANLDIMMKRSNNTWDSNVPPEVTVLSSGPVELGEPNVLICFIDKFSPPVVNVRWLKNGQPVTTGVSETVFLPRKDQLFRKFHYLPFLPSNEDFYDCEVDHLGLERPLLKHWAFEDQTPLPETKENVVCALGLVVGLVGIIMGTIFIIKGTQKSHTGERRGPL
|
|
15957
|
+
A0A8D2IJ01,Urpa-DRA,Urocitellus parryii,9999,339,I,alpha,False,other_mammal,MHXFSSSPHPDSLLNSRFCISEDHTIIQAEFYLHPDELGEYMFDFDGDEILHVDSKIKETVWRLKEFGQFASFEAQGALANLAVDKANLDIMMKRSNNTWDSNVPPEVTVLSSGPVELGEPNVLICFIDKFSPPVVNVRWLKNGQPVTTGVSETVFLPRKDQLFRKFHYLPFLPSNEDFYDCEVDHLGLEKPLLKHWGMEYPSVLFKFPPMMLTSGHLELRAYHNIFYSSYPCVLPLXRFFNFLICNSTNTSFFLFFQLFITILLTTFNPKCCSLPHALPFTLFYFAPXFEEQTPLPETKENVVCALGLLVGLVGIIMGTIFIIKGTQKSHTGERRGPL
|
|
15958
|
+
H0VL53,Capo-DRA,Cavia porcellus,10141,254,I,alpha,False,other_mammal,MVVSGILVLEFLFIAVLMRPQESWAIKEEHKIIQAEFYLYPDEAGEFMFDFDGDEIFHMDLKNQQTVWRLEEFGQYASFEAPGALANIAVDKANLEIIMKRSNHTAGANVPPEVTVLSHGPVELGEPNILICFMDKFSPPVISVTWLKNGKPVTKGVSSTVFLPREDNLFRKFHYLPFVPSMEDVYDCQVEHLGWDQPVLKHWEFEDRSPIPETTENVVCAVGLTVGLVGIVIGSVLIIKGMSKGNAAGHQGPL
|
|
15959
15959
|
A0A6I9MEH5,LOC102914628,Peromyscus maniculatus bairdii,230844,255,I,alpha,False,other_mammal,MATTGAMVLRLFFMVVLMGPQKSWAIKEEHTIIQAEFFLSPDQNGEFMFDFDGDEIFHVDTKNSETIWRLKEFGQFASFEAQGALANIAVDRANLDIMIKRSNHTPDVNVAPEVTVLPNSPVSLGEPNILICFVDKFSPPVVNVTWLRNGKPVITGVSETVFLPREDHLFRKFHYLTFLPSTTDVYDCRVEHWGLEEPLLKHWEFEEQTPLPETKENLVCALGLFVGLVGIIAGVVFIIKGMQRRNAAERRQGAL
|
|
15960
15960
|
A0A3L7INM5,LOC100767639,Cricetulus griseus,10029,255,I,alpha,False,other_mammal,MATTGALVLRLFFMAVLLSPQKSWAIKEEHTIIQAEFFLSPDEKGEFMFDFDGDEIFHVDIRKSETIWRLEEFGQFASFEAQGALANIAVDKANLDIMIKRSNHTPDVNVSPEVTVLPNSPVSLGEPNILICFIDKFSPPVVNVTWLRNGQPVTTGVSETVFLPREDHLFRKFYYLTFLPTTEDVYDCVVDHWGLEEPLLKHWEFEEHTPLPETKENLVCALGLFVGIVGIIAGVVFIIKGMQKRNAAERRQGAL
|
|
15961
15961
|
A0A286XHZ3,LOC100718133,Cavia porcellus,10141,270,I,alpha,False,other_mammal,MSVKMALQIPRGLGPAMVTVVLMVLSWPLAEGEDSPEDFVLQFKGLCYYTNGTQQVRLVTRYIYNREEYARFDSALGEYRAVTELGRPDAEYWNSQKDVLEQTRAELDTVCRHNYEKGSGIFSVQRRVEPMVTISLSRTEALNHHNLLVCSVSDFYPGQIKVQWFRNGQEETAGIVSTPLIRNGDWTFQMLVMLEMTPQRGDIYTCRVEHPSLQSPITVEWRAQSESAQSKMLSGVGGLVLGLIFLGLGVFIRRRSQKGTHGPPPAGLLH
|
|
@@ -15999,78 +15999,78 @@ A0A8C6WCP9,LOC103747994,Nannospalax galili,1026970,260,I,alpha,False,other_mamma
|
|
|
15999
15999
|
A0A6I9MDT3,LOC102914107,Peromyscus maniculatus bairdii,230844,262,I,alpha,False,other_mammal,MDHEQKPGAGLLQLLQFLWLLPHAWAVPEAPPPPVWWDGLQNHTFRHTVFCQLGNPSIGLSESYDEDQLFTYNFSQDTRVPRLPDFAGWAQEQGDASAISFDKDFCEMLVQQVGPKLEGQIPVSRGLPVPEVFTLKPLEFGKPNTLVCFISNLFPPTLTVTWQHHLNPVGGASPTFISAIDGLTFQAFSYLNFTPEPYDLYSCLVTHEIDSYTPIAHWVPQNALPSELLEDLLCGMAFGLGVLGIIMGIAFFIWSQKPCSVD
|
|
16000
16000
|
A0A8C6GW28,MHC-I,Mus spicilegus,10103,250,I,alpha,False,other_mammal,MVLFVELVPVLLTVMSFLSPRGVRAIKADHMGSYGPAFYQSYDASGQFTHEFDGEQIFSVDLKNEAVVWRLPEFGDFAHSDFQSGLMSISMIKAHLDILVERSNRTRAVSVPPRVTVLPKSRVELGKPNVLICIVDDIFPPVINVTWLRNSQPITKGVAQTSFYSQPNHRFRKFHYLTFVPSAEDVYDCKVEHWGLDTPLLQHWEPQVLTPPPDTIETLICGLGLVLGLMGCLLGTVLMITGTRRPSTRR
|
|
16001
16001
|
A0A250YDV1,H2-DMA,Castor canadensis,51338,260,I,alpha,False,other_mammal,MDHERNQGVALQLLQLLWLLPHSWGIPAAPAPVWWDDLQNHTFRHTMFCQDGSPSIGLSESYGEDQLFSFNFSQNMRVPRLPEFADWAQEHGDSLAISFDKEFCEIMIQEIGPELDGKIPVSRGFPVAEVFTMKPLEFGKPNTLVCFISNLFPPTLTVNWQHHSVPVEGVGPTFVSAIDGLIFHAFSYLNFTPEPSDVFSCIVTHEIDRYTAIAFWVPQNAIPSDLLENVLCGVAFGLGVLGIIVGAVLIIYFRKPCSGD
|
|
16002
|
-
A0A286XUP8,
|
|
16003
|
-
A0A8C2VM57,
|
|
16002
|
+
A0A286XUP8,Capo-DOB,Cavia porcellus,10141,270,I,alpha,False,other_mammal,MGSGGMNWVLGLLVTRLVSSTTGGRDSPEDFVIQAKADCYFTNGTEKVQFVVRFIFNLEEYVRFDSDVGVFVALTELGKPDAALWNNRPDILETSRASVNMICRRNYWLGAPFTLGRRVQPEVTVYPERTPLLHQHNLLFCSVTDFYPGDIKIRWFRNGREERAGVVSGGLVRNGDWTFQTVVMLEITPELGDVYCCQVEHPSLLSPVSVEWRAQLEYSWGKVISGVAAFLFGVIFLLVGTVIHLRAWRGSMETLSGNEVSGAVFPTQGY
|
|
16003
|
+
A0A8C2VM57,Chla-DOA,Chinchilla lanigera,34839,250,I,alpha,False,other_mammal,MAGPAGLVLGLLTLMTLRSPRGAGAIQADHMGSYGPAFYQSYDASGQFTYEFDGEQLFSVDLKNREVVWRLPEFGDFTRFDLQNGLLSIARIRAHLGVLVERSNRTRAASVPPRVTVFPKSPVEPGKPNILICMVDNIFPPVIRVTWLRNGHTVSEGVAQTSFYSQPDHSFCKFHYLTFVPRADDVYDCKVEHWGLDEPLLKHWEPQLPSPLPDTSETLVFTLGLAIGLVGFVVGTVLIITGTRKSSAPR
|
|
16004
16004
|
A0A8C6GXG0,MHC-I,Mus spicilegus,10103,256,I,alpha,False,other_mammal,MPCSRALILGVLALTTMLSLCGGEDDIEADHVGFYGISVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFGQLTSFDPQGGLQDIATGKYNLEILIKDSNSTPATNEAPQATVFPKSPVLLGQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFLVNRDHSFHKLSYLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEIPAPMSELTETVVCALGLSVGLVGIVVGTIFIIQGLRSGGTSRHPGPL
|
|
16005
|
-
A0A8D2AXL3,
|
|
16006
|
-
A0A8D2B2N2,
|
|
16007
|
-
I3NB97,
|
|
16005
|
+
A0A8D2AXL3,Scvu-DMB,Sciurus vulgaris,55149,263,I,alpha,False,other_mammal,MTPLLRLLLGLSLGCTGAGGFVTHVESTCLLDDDRTPKEFTYCVSFNKDLLACWNPEAGKIAPCEFGTLNFLAQDISEYLNRNDNLLQRLHNGLQDCATHTQPFWKSLTNRTRPPTVQVAQTTPFNTREPVMLACYVWGFYPAEVTIMWMKNGQFINPNNSAQKTAQPNGDWTYQTVSHLALTPSYGDTYTCVVEHFGTIGPILQDWTPGLSPIQIVKVSVSAVTLGLGLIIFSLGLISWRKSGSSSYIPLPGSNYPEGRHIS
|
|
16006
|
+
A0A8D2B2N2,Scvu-DOA,Sciurus vulgaris,55149,250,I,alpha,False,other_mammal,MALRAGLVLGLHTLLTLLCPQKAGAIKADHMGSYGPAFFQSYGSSGQFTHEFDGDQLFSVDLKNGEVAWRLPEFGDFAHFDPQNGLASIAMIRAHLDVLVERSNHTRATSVSPRVTVLPKSRVELGEPNILICIVDNIFPPVINITWLRNGRTITEGAAQTSFYSQPDHLFRKFSYLTFVPSADDVYDCKVEHWGLEGPLLTHWEPQVPIPPPDTTETLICALGLATGLMGFLMGTILIVTGTCKSSAPR
|
|
16007
|
+
I3NB97,Ictr-DMB,Ictidomys tridecemlineatus,43179,272,I,alpha,False,other_mammal,MTTLLPLLLGLSLGCTGAGGFVAHVESTCLLDDDRNPKDFTYCISFNKDLLACWNPEEGKIAPCEFGTLYPLAQQISQYLNQNDNLLQRLRNGLQDCATHTQPFWKSLTNRTRPPSVQVAQATPFNTREPVMLACYVWGFYPAEVTITWMKNGQLINPNNSAQKTSQPNGDWTYQTVSHLPLTPSYGDIYTCVVEHFGNPGPIFQDWTPGLSPVQTVKVSVSAVTLGLGLIIFSLGCISWRNSASSSYIPLPGSNYPEGNLLICVPSVGGEG
|
|
16008
16008
|
Q7JFS2,MHC RT1.H alpha,Rattus sp,10118,254,I,alpha,False,other_mammal,MFQTKAEALRASFLAFLLSLPGSGAIKAEHVATYDIFVQTQHPSGECMYAFDGDEQFYVDLDREETVWDLPEFSKVYAFDAQEALPYIDSLKNNLRALIQRYNVTQDPSEPPEVTVFPKNPVELGQPNVLICHIDRLFPPVLNVTWLRNGQPVTEGTSETVFLASTELRFHKFHYLTFIPTAQDVYDCRVEHWSLDQPSLSHWEMQEPVQVSETMETTVCALGLVVGLVGSVVGSALIVRVPDGGHNPRTQEPL
|
|
16009
|
-
A0A8C2VSD1,
|
|
16010
|
-
A0A8C2VT27,
|
|
16011
|
-
A0A8D2GTT1,
|
|
16009
|
+
A0A8C2VSD1,Chla-DOA,Chinchilla lanigera,34839,251,I,alpha,False,other_mammal,MAGPAGLVLGLLTLMTLRSPRGAGAIQADHMGSYGPAFYQSYDASGQFTYEFDGEQLFSVDLKNREVVWRLPEFGDFTRFDLQNGLLSIARIRAHLGVLVERSNRTRAASVPPRVTVFPKSPVEPGKPNILICMVDNIFPPVIRVTWLRNGHTVSEGVAQTSFYSQPDHSFCKFHYLTFVPRADDVYDCKVEHWGLDEPLLKHWEPQLPSPLPDTSETLVFTLGLAIGLVGFVVGTVLIITGTRKSSAPRS
|
|
16010
|
+
A0A8C2VT27,Chla-DOB,Chinchilla lanigera,34839,249,I,alpha,False,other_mammal,MGSGGVPWVLGLLVILIRLEYSMTEGRDSPEDFVIQAKADCYFTNGTEKVQFVVRFIFNLEEYVRFDSDVGIFVALTELGQPDAEQWNNRPDILEMSRASVDMVCRHNYRLGAPFTLARRVQPEVTVYPERTPFLQEHNLLICSVTDFYPGDIKIMWFRNGQEERAGVVSSGLIRNGDWTFQTVVMLETTPELGDVYSCWVEHSSLLSPVSVEWRAQPEYSWGKILSGVAAFLFGLIFLLVGIVIHLRA
|
|
16011
|
+
A0A8D2GTT1,Urpa-DMB,Urocitellus parryii,9999,263,I,alpha,False,other_mammal,MTTLLPLLLGLSLGCTGAGGFVAHVESTCLLDDDRNPKDFTYCISFNKDLLACWNPEEGKIAPCEFGTLYPLAQQISQYLNQNDNLLQRLRNGLQDCATHTQPFWKSLTNRTRPPSVQVAQTTPFNTREPVMLACYVWGFYPAEVTITWMKNGQFINPNNSAQKTSQPNGDWTYQTVSHLPLTPSYGDIYTCVVEHFGNPGPIFQDWTPGLSPVQTVKVSVSAVTLGLGLIIFSLGCISWRNSASSSYIPLPGSNYPEGRHIS
|
|
16012
16012
|
A0A8J6GK94,MHC-I,Microtus ochrogaster,79684,490,I,alpha,False,other_mammal,MDHEQKSGAGLLQMLQLLWLLPHSWAVPVAPPPVLWDGLQNHTFRHTIFCQDGNPSMGLSESYDEDQLFSYDFSQNTRVPRLPNFAAWAQDQGDASAISFDKDFCQVLVQQVGPQLEGVIPVSRGLPVPEVYTLKPLELGKPNTLVCFISNLFPPTLTVTWQHHLVPVEGASPTYISAIDGLTFQAFSYLNFTPEPFDLYSCVVTHEIDSYKPIAHWVPQNPLPSELLENVLCGVAFGLGVLGIVMGIAFFIWSWKPCSVGGFVAHMESTCLLDDDGNPQDFTYCISFNKDLLACWDPEEGKIAPCEFGMLYNLAKSISNYLNKNEQLLQRLGKGLQDCAMHTKPFWNALTHRTRPPSVQVAQTAPVNTREPVMLACYVWGFYPADVSIVWMKNGHLVMPHNNRERTAQTNGDWTYQTVSYLALTPSYGDIYTCVVQHEGTSEPVRQDWTVGLSPIQTVKVSVSATTLGLGFIIFCLGFFSWRKSRFSSE
|
|
16013
16013
|
A0A6P5RGF4,LOC110312714,Mus caroli,10089,261,I,alpha,False,other_mammal,MEHEQKSGAVLLRLLRLLWLLPHSWAVLEASTPVLWDGPQNHTFRHTLFCQDGIPNIGLSETYDEDELFSFDFSQNTRVPRLPDFAEWAQGQGDASAIAFDKSFCEMLMREVSPQLEGQIPVSRGLPVAEVFTLKPLEFGKPNTLVCFISNLFPPTLTVNWQLHSAPVEGASPTSISAVDGLTFQAFSYLNFTPEPFDLYSCTVTHEIDRYTAIAYWVPQNALPSDLLENALCGVAFGLGVLGTIMGIVFFLCSQRPCSGD
|
|
16014
16014
|
A0A8C2MYA8,MHC-I,Cricetulus griseus,10029,173,I,alpha,False,other_mammal,MTPSRALILGILALTTALSPCGGQDDIQEVPEVTVFPKSPVLLGQPNVLICLVNNIFPPVINITWLRNSKSVTEGVYETSFLSNSDHSFHKMAYLTFIPSDDDIYDCRVEHWGLEEPALKHWEPEVPAPVSELPETVVCALGLSVGIVGIVVGTVFIIQGLRSGGPSRHPGPL
|
|
16015
16015
|
A0A8C9QKG6,MHC-I,Spermophilus dauricus,99837,250,I,alpha,False,other_mammal,MALRAGLVLGLHTLMTLLCPQKAEAIKADHMGSYGPAFFQSYGASGQFTHEFDGDQLFSVDLKNGEVAWRLPEFGDFTHFDPQNGLASIANIRAHLDVLVERSNRTRATSVPPRVTVLPKSRVELGEPNILICIVDNIFPPVINVTWLRNGQTITEGAAQTSFYAQPDHLFRKFSYLTFVPSAEDVYDCKVEHWGLQEPLLTHWEPQVPVPPPDTTETLICAMGLAIGLMGFLMGTILIITGTCMSSAPR
|
|
16016
16016
|
A0A8C9QS68,MHC-I,Spermophilus dauricus,99837,261,I,alpha,False,other_mammal,MDHEQSQGATLLQLLRLLWLLPHSWATPAAPAPLWRDDLQNHTFRHTVFCQDGSPSIGLTETYDEDLLFSFDFSRNTRVPRLPEFADWAQDQRDASAIVFDKGFCEAMIEQIGPALEGKIPVSRGFPVAEVFTMKPLEFGKPNTLVCFISNLFPPTLTVNWQHNSVPVEGVGPTFVSAMDGLTFQAFSYLNFTPEPYDLFTCIVTHEIDRHTTFAYWVPQNALPSDFLENVLCGIAFVLGVLGIIVGTVLIICFRKPCSGD
|
|
16017
|
-
A0A8D2B1I5,
|
|
16018
|
-
A0A8D2H0Z0,
|
|
16019
|
-
A0A8D2KE84,
|
|
16020
|
-
H0VLQ3,
|
|
16021
|
-
I3M278,
|
|
16022
|
-
A0A287CX61,
|
|
16023
|
-
A0A8C6AAM6,
|
|
16024
|
-
A0A8C6ABU2,
|
|
16025
|
-
A0A8C6AFX2,
|
|
16026
|
-
H0VSG0,
|
|
16027
|
-
I3MG63,
|
|
16017
|
+
A0A8D2B1I5,Scvu-DMA,Sciurus vulgaris,55149,261,I,alpha,False,other_mammal,MDHEQNQGATLLQLLRLLWLLPHSWAIPAAPAPVWWDDLQNHTFRHTVFCQDGSPSMGLTETYDEDLLFSFDFSQNTRVPRLPEFAEWAREQGDASAIAFDKEFCKTMVEKVGPQLEGKIPVSRGFPVAEVFTLKPLEFGKPNTLVCFISNLFPPTLTVNWEHHSVPVEGVGPTFVSAMDGLTFQAFSYLNFTPEPYDLFSCIVTHEIDRYTAIAYWVPQNALPSDLLENVLCGVAFGLGVLGIIVGTVLIIYFRKPCSDD
|
|
16018
|
+
A0A8D2H0Z0,Urpa-DMA,Urocitellus parryii,9999,261,I,alpha,False,other_mammal,MDHEQSQGATLLQLLRLLWLLPXSWATPAAPAPLWRDXLQNHTFRHTVFCQDGSPSIGLTETYDEDLLFAFDFSRNTRVPRLPEFADWAQDQRDASAIVFDKGFCEAMIEQIGPKLEGKIPVSRGYPVAEVFTMKPLEFGKPNTLVCFISNLFPPMLTVNWQHNSVPVEGVGPTFVSAIDGLTFQAFSYLNFTPEPYDLFSCIVTHEIDRHTTFAYWVPQNALPSDFLENVLCGIAFVLGVLGIIVGTVLIIYFRKPCSGD
|
|
16019
|
+
A0A8D2KE84,Urpa-DOA,Urocitellus parryii,9999,250,I,alpha,False,other_mammal,MALRAGLVLGLHTLMTLLCPQKXGAIKADHMGSYGPAFFQSYGASGQFTHEFDGDQLFSVDLKNGEVAWQLPEFGDFTHFDPQNGLASIAIIRAHLDVLVERSNRTRATSVPPRVMVLPKSRVELGEPNILICIVDNIFPPVINVTWLRNGQTITEGAAQTSFYAQPDHLFRKFSYLTFVPSAEDXYDCKVEHWGLPEPLLTHWEPQVPVPPPDTTETLICAMGLAXGLMGFLMGTILIITGTCMSSAPR
|
|
16020
|
+
H0VLQ3,Capo-DOA,Cavia porcellus,10141,310,I,alpha,False,other_mammal,MAIPTSLVLGLLTSMTVLGPHGARAIQGSPCSSQHAWLHSALVYPGHHALGMAGSSDLASQPSAQLFSVDLKNGEVVWRLPEFGDLTRFDLQNGLASIAMIRAHLGVLVERSNRTRATSVPPRVTVLPKSPVELGKPNILICIVDNIFPPVISVTWLRNGKRVTEGVAQTSFYSQPDHTFCQFHYLTFVPWADDVYDCRVEHWGLDEPLLKHWEPQLPASLPDTPETLVCALGLAIGLMGLVVGTVLIITGTRMSRGPRCTRPGTGWGWRSRLCGREAEGGGAGSRGGARSKALGEVGTQMGSRDHALES
|
|
16021
|
+
I3M278,Ictr-DOB,Ictidomys tridecemlineatus,43179,282,I,alpha,False,other_mammal,MSSAWAPWVTVLLVNLIRLNFSMTQDRDSPEDFVIQAKADCYFTNGTEKVQFVVRFIFNLEEYARFDSDLGVFVALTELGLPDAEQWNNRPDILERSRASVDMLCRHNYNLGAPFTVGRKVQPEVTVYPEKTPLLHQHNLLLCSVTGFYPGDIKIRWFWNGQEERAGVLSTGLIRNGDWTFQTMVMLEVTPSPGDVYSCLVEHPSLPGPVSVEWRAQREYSWKKILSGVGAFLLGLTFLLVGIIIHLRARKGNEPSSLFPQISRAILQKPNSGPNQSFSPET
|
|
16022
|
+
A0A287CX61,Ictr-DMA,Ictidomys tridecemlineatus,43179,261,I,alpha,False,other_mammal,MDHEQSQGATLLQLLRLLWLLPHSWATPAAPAPLWRDDLQNHTFRHTVFCQDGSPSIGLTETYDEDLLFSFDFSRNTRVPRLPEFADWAQDQRDASAIVFDKGFCEAMIEKIGPQLEGQIPVSRGYPVAEVFTMKPLEFGKPNTLVCFISNLFPPTLTVNWQHNSVPVEGVGPTFVSAMDGLTFQAFSYLNFTPEPYDLFSCIVTHEIDRHTTFAYWVPQNALPSDFLENVLCGIAFVLGVLGIVVGTVLIIYFRKPCSGD
|
|
16023
|
+
A0A8C6AAM6,Mama-DMB,Marmota marmota marmota,9994,263,I,alpha,False,other_mammal,MTTLLPLLLGLSLGCTGAGGFVAHVESTCLLDDDRNPKDFTYCISFNKDLLACWNPEEGKIAPCEFGTLYPLAQQISQYLNHNDNLLQRLRNGLQDCATHTQPFWKSLTNRTRPPSVQVAQTTPFNTREPVMLACYVWGFYPAEVTITWMKNGQFINPNNSAQKTSQPNGDWTYQTVSHLPLTPSYGDIYTCVVEHFGNPGLIFQDWTPGLSPVQTVKVSVSAVTLALGLIIFSLGCISWRNSASSSYIPLPGSNYPEGRHIS
|
|
16024
|
+
A0A8C6ABU2,Mama-DMA,Marmota marmota marmota,9994,261,I,alpha,False,other_mammal,MDHEQSQGATLLQLLRLLWLLPHSWATPAALAPLWRDDLQNHTFRHTVFCQDGSPSIGLTETYDEDLLFSFDFSRNTRVPRLPEFADWAQDQRDASAIVFDKGFCEAMIEHIGPALEGKIPVSRGFPVAEVFTMKPLEFGKPNTLVCFISNLFPPTLTVNWQHNSVPVEGVGPTFVSAMDGLTFQAFSYLNFTPEPYDLFSCIVTHEIDRHTAIAYWVPQNALPSDFLENVLCGIAFGLGVLGIIVGTVLIIYFRKPCSGD
|
|
16025
|
+
A0A8C6AFX2,Mama-DOA,Marmota marmota marmota,9994,254,I,alpha,False,other_mammal,MALRAGLVLGLHTLMTLLCPHKSGAIKADHMGSYGPAFFQSYGASGQFTHEFDGDQLFSVDLKNGEVAWRLPEFGDFTHFDPQNGLASIAIIRAHLDILVERSNRTRATSVPPRVTVLPKSRVELGEPNILICIVDNIFPPVINVTWLRNGQTITEGAAQTSFYAQPDHLFRKFSYLTFVPSADDFYDCKVEHWGLQEPLLTHWEPQVPVPPPDTTETLICAMGLAIGLMGFLMGTILIITGTCMSSAPRCRNV
|
|
16026
|
+
H0VSG0,Capo-DMA,Cavia porcellus,10141,261,I,alpha,False,other_mammal,MDQRPSRGAALLPLLRLLWLLPYSWPGSVAHSLAWREDLQNHTFRHTVFCQEGSPSMGLSESYDEDLLFSFDFAKSTRVPRLPEFADWAEDRSDAPAIAFDKEFCEAMVQQLDPVFDGKIPVSRGFPVPEVFTLKPLEFGKPNTLVCFVSNLFPPKLTVNWQHNSDPVEGAGPTYISAISGLSFQAFSYLNFTPEPYDLFTCLATHEIDGFTAIAYWVPHNALPSDLLENVLCGLAFGLGVLGIIVGAVLIVYFRRPCSGD
|
|
16027
|
+
I3MG63,Ictr-DOA,Ictidomys tridecemlineatus,43179,220,I,alpha,False,other_mammal,MGSYGPAFFQSYGASGQFTHEFDGDQLFSVDLKNGEVAWRLPEFGDFTHFDPQNGLASIAIIRAHLDVLVERSNRTRATSVPPRVTVLPKSRVELGEPNILICIVDNIFPPVINVTWLRNGQTITEGAAQTSFYAQPDHLFRKFSYLTFVPSAEDVYDCKVEHWGLPEPLLTHWEPQVPVPPPDTTETLICAMGLAIGLMGFLMGTILIITGTCMSSCPR
|
|
16028
16028
|
A0A1U8D0Y9,LOC101844787,Mesocricetus auratus,10036,261,I,alpha,False,other_mammal,MDHEQKPGAGLLHLLQLLWLLPHSWAVPGAPALVSRDGLQNHTFRHTVFCQDGNPSIGLYESYDEDQLYSYDFSQNTRVPRLPDFADWAQEQGDALAISFDREFCEMLMQNISPVLEGQIPVSRGLPVPEVFTLKPLEFGKPNTLVCFISNLFPPTLTVTWQRHFVPVEGASPTYISAVDGLTFQAFSYLNFTPEPFDLYSCVVTHEIDSYTPIAHWVPQNALPSDLLENVLCGLAFGLGLLGIVMGIAFFIWSQKPCSVD
|
|
16029
|
-
A0A286XKG5,
|
|
16030
|
-
A0A8C2VD74,
|
|
16031
|
-
A0A8C2VVW8,
|
|
16032
|
-
A0A8C6ACE2,
|
|
16033
|
-
A0A8C6AD85,
|
|
16034
|
-
A0A8D2B723,
|
|
16035
|
-
H0UZF2,
|
|
16036
|
-
I3MD72,
|
|
16029
|
+
A0A286XKG5,Capo-DMA,Cavia porcellus,10141,264,I,alpha,False,other_mammal,MDQRPSRGAALLPLLRLLWLLPYSWPGSVAHSLAWREDLQNHTFRHTVFCQEGSPSMGLSESYDEDLLFSFDFAKSTRVPRLPEFADWAEDRSDAPAIAFDKEFCEAMVQQLDPVFDGKIPVSRGFPVPEVFTLKPLEFGKPNTLVCFVSNLFPPKLTVNWQHNSDPVEGAGPTYISAISGLSFQAFSYLNFTPEPYDLFTCLATHEIDGFTAIAYWVPHNALPSDLLENVLCGLAFGLGVLGIIVGAVLIVYFRRPCSGGTSP
|
|
16030
|
+
A0A8C2VD74,Chla-DMB,Chinchilla lanigera,34839,263,I,alpha,False,other_mammal,MITLLPLLLGLSLGFTGAGGFMAHVESTCVLDDNGTPKDFTYCVAYNKDLLTCWNPEEGGMAPCEFGTLYRLAVSLSNYLNNNTNLLQRLHNGLQDCATHTQPFWGSLTHRTKPPSVQVAQTTPFNTREPVMLACYVWGFYPADVIITWMKNGQLVAPHSSLQKTAQPNGDWTYQIVSHLALTPAYGDIYTCAVKHAGASEPIYQDWTPGLSPMQKVKVSMSVVALGLGIIIFFAGLISWRKAASSGYTPLPGSIYPEERHIS
|
|
16031
|
+
A0A8C2VVW8,Chla-DMA,Chinchilla lanigera,34839,261,I,alpha,False,other_mammal,MDQKPNQGAALLPLLQLLWLLPYSWALPAAHTPVWQEDLQNHTFRHTVFCQEGSPTIGLSESYDEDQLFSFNFATSTRVPRLPEFADWAEDKSDASAIAFDKKFCETMIQQLDPYFDGKIPVSRGFPVPEVFTLKPLEFGKPNTLVCFVSNLFPPTLTVNWQHNSEPVEGVGPTFVSALGGLNFQAFSYLNFTPEPYDLFTCLATHEIDGYTAVAYWVPHNALPSDLLENVLCGVAFGLGVLGIIVGIVLIVYFQRPCAGD
|
|
16032
|
+
A0A8C6ACE2,Mama-DOA,Marmota marmota marmota,9994,250,I,alpha,False,other_mammal,MALRAGLVLGLHTLMTLLCPHKSGAIKADHMGSYGPAFFQSYGASGQFTHEFDGDQLFSVDLKNGEVAWRLPEFGDFTHFDPQNGLASIAIIRAHLDILVERSNRTRATSVPPRVTVLPKSRVELGEPNILICIVDNIFPPVINVTWLRNGQTITEGAAQTSFYAQPDHLFRKFSYLTFVPSADDFYDCKVEHWGLQEPLLTHWEPQVPVPPPDTTETLICAMGLAIGLMGFLMGTILIITGTCMSSAPR
|
|
16033
|
+
A0A8C6AD85,Mama-DOB,Marmota marmota marmota,9994,271,I,alpha,False,other_mammal,MSSAWAPWVTALLVNLIRLNFSMTQDRDSPEDFVIQAKADCYFTNGTEKVKFVVRFIFNLEEYARFDSDLGVFVALTELGQPDAEQWNNRPDILERSRASVDMLCRHNYNLGAPFTVGRKVQPEVTVYPEKTPFLHQHNLLLCSVTGFYPGDIKIRWFWNGQEERAGVMSTGLIRNGDWTFQTTVMLEVTPSPGDVYRCLVEHPSLPSPVSVEWRAQHEYSWKKILSGVGAFLLGLTVLLVGIIIHLRARKGSVETQSGDKISRAILQKPY
|
|
16034
|
+
A0A8D2B723,Scvu-DOB,Sciurus vulgaris,55149,272,I,alpha,False,other_mammal,MGSAWAPWVTVLLVNLIRLNFSITQDRDSPEDFVIQAKADCYFTNGTEKVQFVVRFIFNLEEYAHFDSDLGIFVALTELGRPDAEHWNSRPDILERSRASVDLLCRRNYNLGAPFTVGRKVQPEVTVYPEKTPFLHQHNLLLCSVTGFYPGDIKIRWFWNGQEERAGVMSTGLIRNGDWTFQTMVMLEVTPSLGDVYSCLVEHPSLSSPISVEWRAQYEYSWKKIFGGVAAFLFGLLFLLVGIIIHLRAWKGSVDTQSGNEVSRVVLPKPYS
|
|
16035
|
+
H0UZF2,Capo-DMB,Cavia porcellus,10141,259,I,alpha,False,other_mammal,MITLLPLLLGLSLGCTGAGGFMAHVESTCLLDDNGTPKDFTYCVAYNKDLLTCWNSDEERMEPCEFGTLNMLAVSLSNYLNNNTNLLQRLHNGLQDCATHTQPFWGSLTQRKKPPTVQVAQTTPFNTREPVMLACYVWGFYPAEVTITWMKNGQVVTPHSSVQKIAQPNGDWTYQTISRLALTPSYGDVYTCAVEHSGASEPIYVDWTPGLSPVQKVKVSVSAVVLGLGIIIFSIGLVSWRKAVPSSYTPLPGSTYPEG
|
|
16036
|
+
I3MD72,Ictr-DMA,Ictidomys tridecemlineatus,43179,292,I,alpha,False,other_mammal,MDHEQSQGATLLQLLRLLWLLPHSWATPAAPAPLWRDDLQNHTFRHTVFCQDGSPSIGLTETYDEDLLFSFDFSRNTRVPRLPEFADWAQDQRDASAIVFDKGFCEAMIEKIGPQLEGQIPVSRGYPVAEVFTMKPLEFGKPNTLVCFISNLFPPTLTVNWQHNSVPVEGVGPTFVSAMDGLTFQAFSYLNFTPEPYDLFSCIVTHEIDRHTTFAYWVPQNALPSDFLENVLCGIAFVLGVLGIVVGTVLIIYFRKPCSGGMSSGGMGEPDGVVHAWACQDHPVAWGRVSSD
|
|
16037
16037
|
G3HS40,MHC-I,Cricetulus griseus,10029,329,I,alpha,False,other_mammal,MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIAAKPVSQMRMATPLLMQPLPMKSMLHGPVQNVTKYGNMTQDHVMHLLLRSGPLDYPKLKGSFPENLKHLKNSMDGLNWKVFESWMKQWLLFEMSKNSLEEKPTEAPPKVLTKCQEEVSHIPDVHPGAFRPKCDENGNYMPLQCHGSTGYCWCVFPNGTEVPHTKSRGRHNCSEPLDMEDPSSGLGVTKQDLGPGFPHYLS
|
|
16038
16038
|
A0A091DJZ0,MHC-I,Fukomys damarensis,885580,291,I,alpha,False,other_mammal,MNSVLPLLLGLGLGCTGAGGFMAHVESTCLLDDNGTPKDFTYCISYNKDLLTCWDPEKDRMDPCEFGTLHMLAVSLSNYLNNSTRLLQRLRNGLQDCGTHTQPFWESLTHRKKPPSVQVAQTTPFNTREPVMLACYVWGFYPADVAISWLKNGQLVTPHSSVWKTAQPNGDWTYQTISHLALTPSHGDVYTCVVEHAGTSEPTRQDWTPGLSPMQTVKVSVSAVTLGLGIIIFSIGLSSWGKAGSSSYTPLPGSTYTKGNITIARFAPGPSEGRRVGRVRAVFSQSRGELL
|
|
16039
|
-
A0A0P6J249,
|
|
16040
|
-
A0A0P6K736,
|
|
16039
|
+
A0A0P6J249,Hegl-DRB1,Heterocephalus glaber,10181,266,I,alpha,False,other_mammal,MLCLGLPGGSLMAALTVTLMVLSPLLALARDTRPRFVEQLKFECHFSNGTERVRFLERNIHNREEFARFDSEVGEYRAVTELGRPDAEYWNSQKELLEQKRAAVDTYCRHNYGVGESFTVQRRVVPKVTLYPTKTQPLQHHNLLVCSVSGFYPGHIEVRWFRNGQEEEAGVVSTGLIQNGDWTFQTLVMLETVPQSGEVYACQVEHPSWSSPVTVEWRAQSASARSKMLSGVGGFVLGLLFLGAGLFIYLRNQKGHSGVQPTGLLS
|
|
16040
|
+
A0A0P6K736,Hegl-DMB,Heterocephalus glaber,10181,263,I,alpha,False,other_mammal,MSTLLPLLLGLSLACTGAGGFMAHVESTCLLDDNGIPKDFAYCIAYNKDLLTCWDPEEDRMAPCEFGTLHMLAVSLSNYLNNNTNLLQRLRNGLQDCATHTQPFWESLTHRRKPPSVQVAQTTPFNTREPVMLACYVWGFYPADVTINWMKNGLLVTPHSSAQKTAQPNGDWTYQTISRLALTPSYGDVYTCVAEHVGASEPIRQDWTPGLSPVQTVKVSVSAVTLGLGIIVFSIGVISWRKAGSSSYTSLPGSIYPEGRHIS
|
|
16041
16041
|
A0A1S3GNQ1,LOC105999890,Dipodomys ordii,10020,246,I,alpha,False,other_mammal,MALSVGLIPGLFMLITFLSPQEAGVITADHMGSYGPAFYQSYGASGQFAHEFDGEQLFSVDWKNREAVWRLPEFGDFMNFDPQGGLTSIAMIKVHLDTLVERSNRTRAISVPPRVTVLPKFRVELGKPNLLICIVDNIFPPVIDITWLRNGQAITEGVAQTSFYSQPDHLFRKFHYLTFVPSSEDVYDCKVEHWGLDKPLLKHWEPQVSTQPPDTMETLVFALGLAIGVMGFLMGTILIIFSHHYG
|
|
16042
16042
|
A0A1S3GRC6,LOC105999888,Dipodomys ordii,10020,264,I,alpha,False,other_mammal,MITLLPVLLGLSLGCTGAEGGFVAHVESTCLLDDDGTPKDFAYCISFNKDLLACWNPEEGIISPCEFGTLNGLAKNIANYLNQDKELLERLSNGLQDCATHTQPFWKSLTHRTRPPSVQVAQTTPFNTREPVMLACYVWGFYPAEITITWMKNGKPIAPHQNIQKIAQPNGDWTYQTISHLALTPSYADTYTCAVEHVGIPKPIFKDWTSGLSPIQTIKVSVSAVTLGVGIIIFSLGLISWQKAGSSGYIPLPGSNYPEGQHIS
|
|
16043
16043
|
A0A6P3VBS6,LOC101591959,Octodon degus,10160,263,I,alpha,False,other_mammal,MDQKLSRGAVLLLPPLLQLLWLLPHSWAVPAALIPVWQEELQNHTFRRTVFCQEGFPNIGLSESYDEDQVFSFDFSKDTRVPRLPEFADWAKDQSDAAAIAFDRKFCRDMVQDLDPYFNGKIPMSRGFPVPEVFTLKPLEFGKPNTLVCFISNLFPPMLTVDWQHNYDPVEGAGPTFVSAVGGLNFQAFSYLNFTPEPSDLFTCLATHGIDGYTAVAYWVPHNALPSDLLENVLCSVAFGLGVLGIIVGTVLIVYFQRPCSGD
|
|
16044
16044
|
A0A6P5NWI8,LOC110284034,Mus caroli,10089,271,I,alpha,False,other_mammal,MGAGRAPWVVALLVNLMRLDSFMIEGRDSPENFVIQAKADCYFTNGTEKVRLLVRFIFNLEEYLHFDSDLGMFVALTELGKPDADQWNKRLDLLETSRAAVNMVCRQKYKLGAPFTVERNVPPEVTVYPERTPLLLQHNLLLCSVTGFYPGDISVKWFRNGQEERSGVMSTGLVRNGDWTFQTTVMLEMIPELGDIYSCLVEHPGLLRPVSVAWMAQSEYSWKKILSGAAAFLLGLIVFLVGVVIHLKAQKASVETQPGNEASRELLHSQP
|
|
16045
|
-
A0A8D2HHN0,
|
|
16045
|
+
A0A8D2HHN0,Urpa-DPB1,Urocitellus parryii,9999,283,I,alpha,False,other_mammal,RNRKWLPHGAPLCPPGIWQVALLRPKAPHCPQWGIDFAAGLSAVLLPAENYVLLALQECYAFNGTQRLVERHIYNREEFVRFDSDVGEFRAVSELGRSTAKYWNSQKDILERKRAAVDTMCRHNYELDEGFTLKLQPKVHVSPTKKGTLQHHNMLVCHVTDFYPGNIXVRWFLNGQEETAGVVATELIRNGDWTFQILVMLETTPKQGDVYTCHVEHPSLNSPVTVEWKAQSDSARNKTLTGVGGFVLGLIFLVVGVFMHKRSKKGKKARGRRRLAFLASSSA
|
|
16046
16046
|
G5BB03,MHC-I,Heterocephalus glaber,10181,313,I,alpha,False,other_mammal,MAVPAGLVLGLYAVMTLLSPPGAGAIKADHMGSYGPAFYQSYDASGQFTHEFDGEQLFSVDLKTREVVWRLPEFGDLARFDLQTGLISIAMIRAHLGVLVERSNGTKATSAPPACRRLKGRKPPSALAPRVTVLPKSRVELGKPNVLICIVDNIFPPVISVTWLRNGQPVTEGVFQTSFYPQPDHLFRKFHYLTFVPSAADVYDCKVEHWGLDEPLLTHWEPPLAAPLPGTTETLVFALGLAIGLAAFVVGTVLIITGACVSGAPSPADSQRSAADYDDTGCRGLQACNVPGLEASAFQVERFCIRKTRHTVH
|
|
16047
|
-
I3M2H3,
|
|
16048
|
-
I3M2H9,
|
|
16049
|
-
A0A0P6J160,
|
|
16050
|
-
A0A0P6J7G1,
|
|
16047
|
+
I3M2H3,Ictr-DPA1,Ictidomys tridecemlineatus,43179,254,I,alpha,False,other_mammal,MFQTGTVILRALSLAFLLSLQGAGAIEVDHVISFAMFAQTNAPTGEFMYEFDEDEMFYVDRDKKETIWQLSEFGRGLSFDSQGGLTNIAIAKSNLDIMTENSNHTQAASEPPEVTVFPKKPVELGQPNTLICHVDRFFPPVLNVTWLRNGQPVTEGVSESVFLPRTDYNFHKFHYLTFVPSDEDVYDCKVEHWGLQEPSLNHWEAQEPVQVTEATETVVCALGLVVGLVGIITGTVLITRALRSSRDPRAQGPL
|
|
16048
|
+
I3M2H9,Ictr-DPB1,Ictidomys tridecemlineatus,43179,288,I,alpha,False,other_mammal,MVSDISPRISIQQVLPSLTATVFSSPAFSSSAMVLQVSEASWAPALMVSLMVLFNPVVQGMATPENYIFQARQDCYASHGTQRFVERYIYNREEYARFDSDVGEYRAVTELGRPQAEYWNSQKDLLEDERARVDTLCRHNYEGIERYTEQRRVQPKVHVSPTKKGTLQHHNMLVCHVTDFYPGNIKVRWFLNGQEETAGVVATELIRNGDWTFQIMVMLEMTPKQGDVYTCHVEHPSLNSPVTVEWRAQSDSARNKTLTGVGGFVLGLIFLVVGVFMHKRSKKAQRGP
|
|
16049
|
+
A0A0P6J160,Hegl-DRA,Heterocephalus glaber,10181,254,I,alpha,False,other_mammal,MAVSGVLVLELFFITVLVWPQESWAIKEEHKIIQAEFYLSPDETGEFMFDFDGDEIFHVDVKKEQTVWRLEEFGRYASFEAQGALANLAVDKANLGIITKRSNNTPDANVPPEVTVLSHGPVELGEPNILICFIDKFSPPVLSVSWLKNGKPVTTGVSETVFLPREDHLFRKFYYLPFLPSTDDVYDCQVEHLGLDQPLLKHWEFEERSPLPETTENVVCALGLTVGLVGILVGTVLIIKGMGKNSAAGHQGPL
|
|
16050
|
+
A0A0P6J7G1,Hegl-DMA,Heterocephalus glaber,10181,261,I,alpha,False,other_mammal,MEEKPSRGAALLPLLRLLWLLPRSWAVPAAYTPVWRDDLQNHTFRHTVFCQEGTPSIGLSESYDEDLLFSFDFSKNTRVPRLPDFADWAQDQSDAPAIAFDKQFCEMMVQQLDPVLDGQIPVSRGFPVPEVFTLKPLEFGKPNTLVCFVSNLFPPMLTVSWEHNSEPVEGVGPTFVSAVDGLSFQAFSYLNFTPEHSDVFSCMATHEIDRYTAIAYWVPHNALPSDLLENVLCGVAFGLGVLGIIVGTVLTVYFGWPCSGD
|
|
16051
16051
|
A0A6P3EHZ0,LOC101591570,Octodon degus,10160,250,I,alpha,False,other_mammal,MAVPAGLVLGLLTLMTLLSRHGAGAIPADHLGSYGPAFYQSYDASGQFTHEFDGEQLFSVDLKSGELAWRLPEFADFSRFDLQNGLVSIARIRAHLAVLVDRSNRSRAASVPPRVTVLTKSPTELGKPNILICVVDNIFPPVINVTWLRNGQTVTEGVAQTSFYSQPDHTFRKFHYLTFVPGQDDVYDCKVEHWGLDEPLLEHWEPQLPAPLPDTTETLVCALGLAIGLVAFFVGTVLIITGTLVSSVPR
|
|
16052
16052
|
A0A8C0XHH3,LOC109686676,Castor canadensis,51338,263,I,alpha,False,other_mammal,MIPLLPLLLGLSLSCTGAGGFVAHVESTCLLDDGGTPKDFTYCISFNKDLLTCWDPEEGKMAPCEFGTLNPLARYLSDYLNNQKSLLQRLHNGLQDCATHTQPFWESLTNRTRPPSVQVARITPFNTREPVMLACYVWGFYPADLTISWMKNGKLITPDHSAQKTAQPNGDWTYQALSHLALTPSYGDTYTCVVEHIGTPEPILRDWTPGLSPMQTVKVSVSAVTLGLGCILFSLGLFSWQKARSSSYIPLPGSNYPEGRHIS
|
|
16053
|
-
A0A8C2VUR3,
|
|
16054
|
-
A0A8D2B5E8,
|
|
16053
|
+
A0A8C2VUR3,Chla-DPB1,Chinchilla lanigera,34839,257,I,alpha,False,other_mammal,MALHIPEAPWIAALTTALLVLSNTVVQSRTTPENFLYQGRQNCYARNGTQRFVERYIYNREEYARFDSDVGEFRAVTELGRPDADHWNSQKDILEQKRAVVDTVCRHNYEITAPLTVQRRVQPKVHVSPSKKGTLQHHDQLICHVTDFYPGNIEVRWFLNGQEETAGIVSTNLIRNGDWTFQILVMLEMTPQQGDVYTCHVEHPSLDSPVTVEWKAQSDSARNKKLTGVGGFVLGLIFLAVGIFMHIRSKKGQRGSR
|
|
16054
|
+
A0A8D2B5E8,Scvu-DPB1,Sciurus vulgaris,55149,257,I,alpha,False,other_mammal,MMVLQVPEAPWTTTLMVLLMVLSQPMVQGRATPENYVYQIRQDCYAANGTQRFVERYVYNREEYVRFDSDVGEFRAVTELGRPDAEYWNSQEDDLEQTRAAVDTVCRHNYELDEGFTLKRRVKPNVHVSPSKKGDLQHHDLLVCHVTDFYPGNIEVRWFLNGHEETSGVVSTNLIRNGDWTFQILVMLEMTPKQGDVYTCHVEHPSLNSAITVEWKAQSDSARNKTLTGVGGFVLGLIFLAVGILMHMRSKKAQRGP
|
|
16055
16055
|
A0A8D2B768,MHC-I,Sciurus vulgaris,55149,261,I,alpha,False,other_mammal,MLGKIVHQIPRGLRKAAVMVLLMMLSSPVTDSRDSPRDFVYQFKGYCYFTNGTQRVRLIARYVYNLEENVRFDSDVGEYRAVTELGRPDAEYWNSQKDVLEQTRAEVDTVCKHNYGIELRTTLKRRVEPKVTISPTRTEALNHHNLLVCSVTDFYPSQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQILVMLEATPQRGDVYTCHVEHPSLQSPVTVEWRAQSESSQSKMLSGIGGFVLGLIFLGLGLLIRHRSQKGLLH
|
|
16056
|
-
A0A8D2HG83,
|
|
16056
|
+
A0A8D2HG83,Urpa-DPB1,Urocitellus parryii,9999,282,I,alpha,False,other_mammal,EMASSRGPLVALLILLLPVSISSPPGIWQVALLRPKAPHFAAGLSAVLLPAENYVLLALQECYAFNGTQRLVERHIYNREEFVRFDSDVGEFRAVSELGRSTAKYWNSQKDILERKRAAVDTMCRHNYELDEGFTLKRRVQPKVHVSPTKKGTLQHHNMLVCHVTDFYPGNIXVRWFLNGQEETAGVVATELIRNGDWTFQILVMLETTPKQGDVYTCHVEHPSLNSPVTVEWKAQSDSARNKTLTGVGGFVLGLIFLVVGVFMHKRTQMTRSGAQAHVGSX
|
|
16057
16057
|
A0AA41SRY7,MHC-I,Sciurus carolinensis,30640,279,I,alpha,False,other_mammal,MLLQLLRLLWLLPDSWAIPAAPAPVWWDDLQNHTFRHTVFCQDGSPSVGLTETYDEDLLFSFDFSQNTRVPRLPEFAEWAQEQGDASAIAFDKEFCKIMVENIGPQLEGKIPVSRGFPVAEVFTLKPLEFGKPNTLVCFISNLFPPTLTVNWEHHSVPVEGVGPTFVSAMDGLTFQAFSYLNFTPEPYDLFSCIVTHEIDRYTAIAYWVPQNALPSDLLENVLCGVAFGLGVLGIIVGTVLIIYFRKPCSGARSRVLNQLEVLLTFNLFMTLSESSSPN
|
|
16058
16058
|
A0AAX6T120,LOC101702636,Heterocephalus glaber,10181,272,I,alpha,False,other_mammal,MGSGWVSCMLVPLVSLIRLESSTTEGRDSPEDFVIQAKADCYFTNGTEKVQFVVRFIFNLEEYVRFDSDVGMFVALTELGKPDAEHWNNRPDILETSRASVDMVCRHNYRLGAPFTLGRRVQPEVTVYPERTPFLQQHNLLLCSVTGFYPGDIKIRWFRNGQENRAGVVSSGLIRNGDWTFQTVVMLEMTPELGDVYSCRVEHPSLLSPVSVEWRAQSEYSWGKMLSGVAAFLLGLIFLLVGIFIHIRAWKGSVETHSGNEVSGAVCPVQAH
|
|
16059
16059
|
G5BB06,MHC-I,Heterocephalus glaber,10181,300,I,alpha,False,other_mammal,MSTLLPLLLGLSLACTGAGGFMAHVESTCLLDDNGIPKDFAYCIAYNKDLLTCWDPEEDRMAPCEFGTLHMLAVSLSNYLNNNTNLLQRLRNGLQDCATHTQPFWESLTHRRKPPSVQVAQTTPFNTREPVMLACYVWGFYPADVTINWMKNGLLVTPHSSAQKTAQPNGDWTYQTISRLALTPSYGDVYTCVAEHVGASEPIRQDWTPGLSPVQTVKVSVSAVTLGLGIIVFSIGVISWRKAGSSSYTSLPGSIYPEGNSSVALFAPGPSERMSRKSQGWVQLVVPRVGGAAVGSSELI
|
|
16060
|
-
A0A8C2VT10,
|
|
16061
|
-
A0A8C6ACY3,
|
|
16060
|
+
A0A8C2VT10,Chla-DPB1,Chinchilla lanigera,34839,244,I,alpha,False,other_mammal,MALHIPEAPWIAALTTALLVLSNTVVQSRTTPENFLYQGRQNCYARNGTQRFVERYIYNREEYARFDSDVGEFRAVTELGRPDADHWNSQKDILEQKRAVVDTVCRHNYEITAPLTVQRRVQPKVHVSPSKKGTLQHHDQLICHVTDFYPGNIEILVMLEMTPQQGDVYTCHVEHPSLDSPVTVEWKAQSDSARNKKLTGVGGFVLGLIFLAVGIFMHIRSKKGRNSCKVPRKLVSSMIYPSQW
|
|
16061
|
+
A0A8C6ACY3,Mama-DPB1,Marmota marmota marmota,9994,258,I,alpha,False,other_mammal,KCLSWAWWCIPIIPATLEAEAGGSQVQGQPRQFREALSNFLRPCLKIKTVRDVAQWWSPPGFNAQYRKEGRESLNFNFNSRKDLLEDERARVDTMCRHNYETVERYTVQRRVQPKVHVSPTKKGSLQHHNMLVCHVTDFYPGNIKVRWFLNGQEETAGVVATELIRNGDWTFQIMVMLEMTPKQGDVYTCHVEHPSLNSPVTVEWKAQSDSARNKTLTGVGGFVLGLIFLVVGVFIRMRNYTPLHDVSNCILLPCIIN
|
|
16062
16062
|
A0A8C6R8F6,LOC103747627,Nannospalax galili,1026970,258,I,alpha,False,other_mammal,MMVLPVPVAPWTAALTVLLMVLNKSVVQGRTTPENYLFREWQECHLTHGRHRYVDRYIYNQEEYVRFDSDVGEFRAVTELGRPTADYWNSRKEALEQKRAELDTVCRHNHELNQRLSQSLIAQPKVHVSPSKGGTLNHHNLLVCQVTDFYPGNIQVRWFRNNQEETTGISTTNPIHNGDWTFQILVTLEMTPQRGDVYTCHVEHPSLDRPITVEWRAQSDSARNKTLTGVGGLVLGLIFLAVGLIMHVRSKKAQRGSR
|
|
16063
|
-
A0A8D2KIA2,
|
|
16063
|
+
A0A8D2KIA2,Urpa-DPB1,Urocitellus parryii,9999,267,I,alpha,False,other_mammal,SSSMMVLQAPKSPWTTALTVLLMVLSHPMVQGRATPENYVLLALQECYAFNGTQRLVERHIYNREEFVRFDSDVGEFRAVSELGRSTAKYWNSQKDILERKRAAVDTMCRHNYELDEGFTLKRRVQPKVHVSPTKKGTLQHHNMLVCHVTDFYPGNIXVRWFLNGQEETAGVVATELIRNGDWTFQILVMLETTPKQGDVYTCHVEHPSLNSPVTVEWKAQSDSARNKTLTGVGGFVLGLIFLVVGVFMHKRSKKGKKQRWPVGREE
|
|
16064
16064
|
G5BB02,MHC-I,Heterocephalus glaber,10181,258,I,alpha,False,other_mammal,PEERMFQARAVILSTLFLAFLLSLQGAGAIKADHVSTYAIFAQTHSPSGEYMFEFDEDEQFYVDLDKKETIWHLPEFGRAFSFDAQGGLTNIAIANSNLNILIKRTNRTQAPNDPPEVIVFPKEPVELGEPNVLICHVDRFFPPVLNVTWLRNGQPVTVGVSESIFLPRTDYSFHKFHYLTFLPNTEDVYDCKVEHWGLDEPLLTHWEPQEPIQVTETMETVVCALGLVVGLVGITVGTVLIIRALQSSRDPRAQGPL
|
|
16065
16065
|
A0A091CUB6,MHC-I,Fukomys damarensis,885580,289,I,alpha,False,other_mammal,MAVPAGLVLGLHALMTLLSPHRAGAIKADHMGSYGPAFYQSYDASGQFTHDFDGEQLFSVDLKTREVAWRLPELGDVAHFDLQTGLVSIAMIRAHLGVLVERSNGTGATPVPPRVTVLPKARVELGKPNVLICIVDNIFPPVISVTWLRNGRLVTEGVFQTSFYPQPDHSFRKFHYLTFVPTAADVYDCRVEHWGLEQPLLTHWEPPLPAALPGTTETLVFALGLAIGLLGFVVGTVLIITGACVSGAPSCRGPGSPDRPERAGGGRSETLWGRKGDLGEPWTGVGEQR
|
|
16066
16066
|
A0A5E4BSL3,MHC-I,Marmota monax,9995,260,I,alpha,False,other_mammal,MDHEQSQGATLLQLLRLLWLLPHSWATPAALAPLWRDDLQNHTFRHTVFCQDGSPSIGLTETYDEDLLFSFDFSRNTRVPRLPEFADWAQDQRDASAIVFDKGFCEAMIEQIGPALEGKIPVSRGFPVAEVFTMKPLEFGKPNTLVCFISNLFPPTLTVNWQHNSVPVEGVGPTFVSAMDGLTFQAFSYLNFTPEPYDLFSCIVTHEIDRHTAIAYWVPQNALPSDFLENVLCGIAFGLGVLGIIVGTVLIIYFRKPCSD
|
|
16067
16067
|
A0A5E4BTL0,MHC-I,Marmota monax,9995,261,I,alpha,False,other_mammal,MDHEQSQGATLLQLLRLLWLLPHSWATPAALAPLWRDDLQNHTFRHTVFCQDGSPSIGLTETYDEDLLFSFDFSRNTRVPRLPEFADWAQDQRDASAIVFDKGFCEAMIEQIGPALEGKIPVSRGFPVAEVFTMKPLEFGKPNTLVCFISNLFPPTLTVNWQHNSVPVEGVGPTFVSAMDGLTFQAFSYLNFTPEPYDLFSCIVTHEIDRHTAIAYWVPQNALPSDFLENVLCGIAFGLGVLGIIVGTVLIIYFRKPCSGD
|
|
16068
16068
|
A0A6P3EJQ5,LOC101559862,Octodon degus,10160,254,I,alpha,False,other_mammal,MTVNRGLVLAFFLVTVLMGPQESGAIKEEHKIIQAEFYLYPDDVGEFMFDFDGDEIFHVDLEKQQTVWRLEEFGQYASFEASGALANMAVDKANLEIMMKRSNNTPDTNVRPEVTVLSHGPVELGEPNVLICFVDKFSPPVISVTWLKNGKPVDTGVSSTVVLPREDNLFRKFHYLAFLPSTEDFYDCKVEHLGLDQPLLKHWEFEERSPLSETTENVVCALGLIVGLVGITAGTVLIIKGMRKRSAARAQGPL
|
|
16069
|
-
A0A8C2VH04,
|
|
16069
|
+
A0A8C2VH04,Chla-DPA1,Chinchilla lanigera,34839,254,I,alpha,False,other_mammal,MFQSRAVILSTLSLAFLLSLPGAAAIKADHELSNAAFVQTHSPSGEYMFEFDEDEMFYVDLEKKQTVWHLPEFGQAFTFDAQGGLANIAILKNNLNAVIHHSNRTQAPNDPPEVTVFPKQPVELGEPNILICHVDKFFPPVLNVTWLRNGQPVTEGVSESIFLPRTDYSFHKFLYLTFLPNTEDVYDCKVEHWGLDEPYLKHWEPQEPIQVTETTETVVCALGLLVGLVGIIVGTVLIIRALRSSRDPRAQGPL
|
|
16070
16070
|
A0A8C6QCG0,LOC103731003,Nannospalax galili,1026970,266,I,alpha,False,other_mammal,MALQIPRSLPAAAVVVMLMVLSSPGAQGRDSPWDAVFQFKGECYFTNGTQRIRSVDRYIYNLEEYVRFDSVVDKYFAVTELGRSWADYWNSQQDIMERTRAELDTVCRHNYELTEVPTTLSRLEQPKVTISLSKTEALNHHNLLVCSVTDFYPGQIKVRWFRNDQEQTTGVVSTQLIKNGDWTFQILVMLEMTPQRGDVYVCHVEHASQQSPTTVEWRAQSESAQSKMLSGIGGLVLGLIFLGLGVYIRHRSQKGTRGPPPAGLLH
|
|
16071
|
-
A0A8D2AWK2,
|
|
16072
|
-
A0A8D2H841,
|
|
16073
|
-
A0A8D2KGM5,
|
|
16071
|
+
A0A8D2AWK2,Scvu-DPA1,Sciurus vulgaris,55149,259,I,alpha,False,other_mammal,VPEKRMFQTRAVLLRALSLAFLLNIQGAGAIKADHVSTYAMFAQTHAPLGEFMFEFDEDEQFYVDRDKKETIWRLPEFGQAFSFDFQGGLTNIAIAKSNLDVLIKRSNHTQAVNEPPEVVVFPKEPVELGQPNTLICHVDRFFPPVLNVTWLRNGQPVTEGVSESIFLPHTDYTFHKFHYLTFLPTAEDFYDCKVEHWGLQEPRLKHWEAQEPVQVTEATETVVCALGLVVGLVGIITGTVLITRALRSSRDPRARGPL
|
|
16072
|
+
A0A8D2H841,Urpa-DPB1,Urocitellus parryii,9999,275,I,alpha,False,other_mammal,MGFKIHPWWVNIDPAGTGGSEERERGLQEPGRRGSGPCGLAGGPRNYLYQSRVDCYASHGTQRFVDRYLYNREEYVRFDSDVGEFRAVTELGRPVAEYFNSQKDILEDHRAAVDTVCRHNYEVIERYTVQRRGETKVHVSPTKKGTLQHHNMLVCHVTDFYPGNIXVRWFLNGQEETAGVVATELIRNGDWTFQILVMLETTPKQGDVYTCHVEHPSLNSPVTVEWKAQSDSARNKTLTGVGGFVLGLIFLVVGVFMHKRTQMTRSGAQAHVGSX
|
|
16073
|
+
A0A8D2KGM5,Urpa-DPB1,Urocitellus parryii,9999,275,I,alpha,False,other_mammal,MGFKIHPWWVNIDPAGTGGSEERERGLQEPGRRGSGPCGLAGGPRNYLYQSRVDCYASHGTQRFVDRYLYNREEYVRFDSDVGEFRAVTELGRPVAEYFNSQKDILEDHRAAVDTVCRHNYELDEGFTLKRRVQPKVHVSPTKKGTLQHHNMLVCHVTDFYPGNIXVRWFLNGQEETAGVVATELIRNGDWTFQILVMLETTPKQGDVYTCHVEHPSLNSPVTVEWKAQSDSARNKTLTGVGGFVLGLIFLVVGVFMHKRTQMTRSGAQAHVGSX
|
|
16074
16074
|
A0A8J6GJN0,MHC-I,Microtus ochrogaster,79684,349,I,alpha,False,other_mammal,MVLRVELVLAIHTLMRFLSPQGVWAIKGLSPHSPRRGKAESEQVLHLSQTCFSPPTLPSPNTADHMGYYGPAFYQSYSASGQFTHEFDGEQIFSVDLKNREVVWRLPEFGASLYSNFQNGLASIAMIRAHLDVLVERSNRTRAISEPPRVTVLPKSRVELGKPNVLICVVDDIFPPVIDVTWLRNGQPVTEGVAQTSFYSQPNHRFRKFHYLTFVPSAEDVYDCRVEHWGLDQPLLQHWEPQVLTPPPETTETLICYLGLAVGFVGFLLGTVLIVTGMCLPSVRRDTTPKRSFPKGLAVSLVLSVSLHPPTAEPALLWREMKKCHSKGTVVGKGGTGVRSCGAFLPHLA
|
|
16075
16075
|
G3HQS4,MHC-I,Cricetulus griseus,10029,523,I,alpha,False,other_mammal,MYDIFAQTQKPSGDCVYEFDGDELFYVDLDREETVWGLREFSTVYGFDAQGALPYILSLKDNLRALIQRHNVTQVPSEPPEVTVFPKNPVELGQPNVLICHIDRFFPPVLNVTWLRNGQLVTEGTSETVFLPSTELRFQKFHYLTFIPTAKDVYDCRVEHWSLGQPSLSHWEMPEPLQVTETMETVVCALGLVVALVGIVIGSALIIGALHSSHDPRGPGTRVSDCADVAKAPPPTPSVMVLPVELVLAFHTLISFLNPQGVRAIKADHMGSYGPAFYQSYDASGQFTHEFDGEQIFSVDLKNGEVVWRLPEFGDTQYSNFQSGLASIAMIRAHLDILVERSNRTRAISVPPRVTVLPKSPVELGKPNVLICIVDDIFPPVINVTWLRNNQPVTKGVAQTSFYTQPNHRFRKFHYLTFVPWAEDMYDCRVEHWGLEAPLLQHWEPQVLTPPPDTTETLVCGLGLALGFMGFLLGTALIVTGLSPRSIRRCRSPGSLRVKGGGHECVGEGKSDSVKSRGEKRGG
|
|
16076
16076
|
G3HQS7,LOC100761082,Cricetulus griseus,10029,261,I,alpha,False,other_mammal,MAMLLQLLLGLSLGCVGVGGFVAHVESTCLLDDSGTPKDFTYCVAFNKDLLACWDPESGQIVPIEFGVLYNLAVFISKSLNTNEALIRRLGKGLQDCAMHTQPFWDALTHRTRPPSVQVARTAPINTKEPVMLACYVWGFYPADVTVTWMKNGNLVIPHNIKESTAQTNGDWTYQTVSYLALTPSYGDIYTCVVQHSATSEPVRQDWTIGLSPIQTVKVSVSAVTLGLGFIIFCFGFFSWRKARLSSYIPLPGSTYPEGRH
|
|
@@ -16082,9 +16082,9 @@ A0A5E4BQR1,MHC-I,Marmota monax,9995,254,I,alpha,False,other_mammal,MALHAGLVLGLHT
|
|
|
16082
16082
|
A0A6P3VCA7,LOC101592349,Octodon degus,10160,263,I,alpha,False,other_mammal,MTALLPLLLGLSLGCTGAGGFMAHVESTCLLDDNGIPKEFTYCVAYNKDLLTCWNPEVDRMDPCEFGTLHGLAMYLSDCLNNDTSLLQRLRNGLQDCVTHTKPFWGSLTHRTKPPSVQVAQTTPFNTREPVMLACYVWGFYPADVTITWMKNGKLVTPHSSVQRTAQPNGDWTYQTISRLALTPSYGDVYTCAVEHAGASAPIYQDWTPGLSPLQKVKVSVSAVALGLGIIVFSLGMVSWRKATSSGYTPLPGSIYPEGRHIS
|
|
16083
16083
|
A0A8B7VNF0,LOC109695196,Castor canadensis,51338,267,I,alpha,False,other_mammal,MVCLWLPEGSDMATLTVILMMLSPPLALARDTQPRFLEQAKSECHFSNGTERVRFLDRYFHNREEFVRFDSDVGEYRAVTELGRPDAEYWNGQKDLLEQKRAAVDTVCRHNYGVGESFTVQRRVEPKVTVYPTKTQPLQHHNLLVCSVSGFYPGQIEVRWFRNGQEEEEAGVVSTGLIQNGDWTFQTLVMLETVPQSGEVYTCHVEHPSLKIPVTVEWRAQSGSAQSKMLSGVGGFVLGLLFLGLGLFIYFKNPKGHSGLQPTGLLS
|
|
16084
16084
|
A0A8B7VRY5,LOC109695178,Castor canadensis,51338,269,I,alpha,False,other_mammal,MSGKMAVCIPRGLCAAAVVVVVLMVFNPTQGRDSPQDFVYQCKGQCYFTNGTQRVRLVARHIYNREEHVRFDSDVGEYRAVTELGRPIAEYWNSQKDVLEDERAAVDTVCKHNYEVMEIPVSLQRRVEPMVTIAPSRTEALNHHNLLVCSVTDFYPGQIKVRWFRNNQEETAGVVSTPLIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRAQSESAQSKMLSGVGGFVLGLIFLGLGLFIRHRSQKGTRGPPPAGLLH
|
|
16085
|
-
A0A8C6AD95,
|
|
16086
|
-
A0A8D2HPR9,
|
|
16087
|
-
A0A8D2KI81,
|
|
16085
|
+
A0A8C6AD95,Mama-DPA1,Marmota marmota marmota,9994,254,I,alpha,False,other_mammal,MFQTGTVILRALSLAFLLSLQGAGAIEVDHVTRFAMFAQTNAPSGEFMFEFDEDEMFYVDRDKKETIWQLSEFGRGLSFDFQGGLTNIAIVKSNLDILTERTNHTQDSSEPPEVTVFPKEPVELGQPNTLICHVDRFFPPVLNVTWLRNGQPVTEGVSESVFLPRTDYNFHKFHFLTFVPSAEDVYDCKVEHWGLEEPSLNHWEAQEPVQVTEATETVVCALGLVVGLVGIITGTVLITRALRSSRDPRAQGPL
|
|
16086
|
+
A0A8D2HPR9,Urpa-DPB1,Urocitellus parryii,9999,271,I,alpha,False,other_mammal,MVLQAPKSPWTTALTVLLMVLSHPMVQGRATPENYVLLALQECYAFNGTQRLVERHIYNREEFVRFDSDVGEFRAVSELGRSTAKYWNSQKDILERKRAAVDTMCRHNYELDEGFTLKRRVQPKVHVSPTKKGTLQHHNMLVCHVTDFYPGNIXVRWFLNGQEETAGVVATELIRNGDWTFQILVMLETTPKQGDVYTCHVEHPSLNSPVTVEWKAQSDSARNKTLTGVGGFVLGLIFLVVGVFMHKRSKKGKKARGRRSRRTVLESSGSH
|
|
16087
|
+
A0A8D2KI81,Urpa-DPA1,Urocitellus parryii,9999,254,I,alpha,False,other_mammal,MFQTRAVLLRALSLAFLLSLPGAGAIKADHVSIYATFAQTHAPTGEYMFELDEDEQFYVDRDKKETIWRLPEFGQVFSFDSQGGLADIAVLKSNLDIMIKRSNHTQAASEPPEVTVFPKEPVELGQPNTLICHVDRFFPPVLNVTWLRNGQPVTEGVSEXVFLPRTDYSYHRFHYLTFVPSAEDVYDCKVEHWGLEEPRLNHWEVQKLVQMTEVSETVVCALGLVVGLVGIITGTVLITRALRSSRDPRARGPL
|
|
16088
16088
|
G3HQS3,MHC-I,Cricetulus griseus,10029,280,I,alpha,False,other_mammal,MVLCIPVSPWVAALMVLLSRGIQGGAPPDNHLLRALHECYAEDNRTQRYVMRCILDREEFMRFDSTVGEFRALTAMGRPWAESWNSQKEYMERRRAEVDTVCRHNYELNQGFTVKRRVQPKVHVSPSKKVALQHHGLLVCHATDFYPGNIQVRWFRNGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQGGDVYTCHVEHPSLQSPITVEWKVRSDSARNKMLTGVCGLVLGLIFLAVGTTMHLRCKKGEKCVEEQPPTAAMAGGSQVQGLPGLHSETWT
|
|
16089
16089
|
A0A2I5YP24,Aa,Peromyscus maniculatus rufinus,44239,137,I,alpha,False,other_mammal,SRALVLGILALTTALSPCGGEDDIKAQHVGSYGIEVYYSYGPNGQYTFEFDGDEEYYVDLDKKETIWRIPEFGQLTSFDPQGGLQEIAIAKHNLEVMSKESNSTPATNEVPEVTVFPKSPVLLGQPNTLICSVDNIF
|
|
16090
16090
|
C7T5C2,Mana-DQB,Mastomys natalensis,10112,266,I,alpha,False,other_mammal,MALQIPSLLLLSAAVVVLMVLSSPGTEGRDSPRDFVYQFKAQCYYTNGTQRIRLVARKIYNQEEHVRFDSDVGEFRAVTELGRPDAKYFNSQQEILDQYRAAVDTVCRHNYEVMEARTFLRLLEQPNVAISLSRTEALNHHNLLVCSVTDFYPAQIKVRWFRNGQEETAGVVSTQLIKNGDWTFQVQVMLEMTPQRGEVYTCQVDHPSVESPITVEWRVQSESAQSKMLSGIGGCVLGVIFLGVGLFIRHRSQKGPRDPPPAGLLQ
|
|
@@ -16115,7 +16115,7 @@ A0A8C5P5T3,LOC101601067,Jaculus jaculus,51337,218,I,alpha,False,other_mammal,NYV
|
|
|
16115
16115
|
A0AAX6P9T4,LOC101705012,Heterocephalus glaber,10181,266,I,alpha,False,other_mammal,MLCLGLPGGSLMAALTVTLMVLSPLLALARDTRPRFVEQVKHECHFSNGTERVRFLDRYIHNREEFARFDSEVGEYRAVTELGRPDAEYWNSQKELLERRRAELDTYCRHNYGVAESFTVQRRVVPKVTLYPTKTQPLQHHNLLVCSVSGFYPGHIEVRWFRNGQEEEAGVVSTGLIQNGDWTFQTLVMLETVPQSGEVYACQVEHPSWSSPVTVEWRAQSASARSKMLSGVGGFVLGLLFLGAGLFIYLRNQKGHSGVQPTGLLS
|
|
16116
16116
|
A0A061IH88,MHC-I,Cricetulus griseus,10029,530,I,alpha,False,other_mammal,MDQEQKPGAGLLHLLQLLCLLPRCWAVPGGAPAPVLWEGLQNHTFRHTVFCQDGNPSIGLSESYDEDQLFYDFSQNTRVPRLPDFADWAQEQGDASAISFDKEFCNMLIQEIGPQLEGLIPVSRGLPVPEVFTLKPLEFGKPNTLVCFISNLFPPTLTVSWQHHFVPVEGASPTYISAIDGLTFQAFSYLNFTPEPFDIYSCVVTHEIDSYTPIAHWVPQNALPSDLLENVLCGLAFGLGLLGIITGIAFFIWSQKPCSVERSMAMLLQLLLGLSLGCVGVGGFVAHVESTCLLDDSGTPKDFTYCVAFNKDLLACWDPESGQIVPIEFGVLYNLAVFISKSLNTNEALIRRLGKGLQDCAMHTQPFWDALTHRTRPPSVQVARTAPINTKEPVMLACYVWGFYPADVTVTWMKNGNLVIPHNIKESTAQTNGDWTYQTVSYLALTPSYGDIYTCVVQHSATSEPVRQDWTIGLSPIQTVKVSVSAVTLGLGFIIFCFGFFSWRKARLSSYIPLPGSTYPEVKSSSPAVL
|
|
16117
16117
|
A0A091DQV1,MHC-I,Fukomys damarensis,885580,805,I,alpha,False,other_mammal,MLCLWLPGGSCMAPLLMAVTLMVLSPPLALARDTRPRFMESVKYECHFSNGTERVRYVERLFYNQEEFVRFDSEVGEYRSVTELGRPDAKSWNSQKETLEDRRAAVDTYCRHNYGVGESFTVQRRGHMEVRWFRNGQEQEDGVVSTGLIRNGDWTFQTLVMLETVPRSGEVYVCRVEHPSWSSPVAVEWRAQSGSARSKMLSGVGGFVLGLLFLGAGLFIYCRNQKAEVMVSEKSEVTDLTLGMLSVDTLEFNQQHAVSRAPRRLLGGSSDSDTDGAESSPGFGLGQERVCFPAVGLQGRQGEPGQEQEARVTRGRVLVFPSGGQCPPKRVALTGSLMPSARFMEYVTSECHFSNGTERVRFLKRYVYNQEENLRFDSDVGEFRAVTELGRPDAESWNSQKETLEQKRAEVDTVCRHNYGVGESFTVQRRVEPKVTVYPTKTQALQHHSLLVCSVSGFYPGHIEVRWFRNGQEQEDGVVSTGLIRNGDWTFQTLVMLETVPRSGEVYVCRVEHPSWSSPVTVEWRAQSGSARSKMLSGVGGFVLGLLFLGAGLFIYCRNQKAEVVVSEKSQDTLQFNQQHAVSRAPRRLLCGSSDSDTDGAESSPGFGLGQERAPESPSHPSSLALESPESAFLSEERSVEPKVTVYPTKTQALQHHSLLVCSVSGFYPGHIEVRWFRNGQEQEDGVVSTGLIRNGDWTFQTLVMLETVPRSGEVYVCRVEHPSWSSPVTVEWRAQSGSARSKMLSGVGGFMLGLLFLGAGLFIYCRNQKGDSEVQPIGNVLETCLTDRFALPSTACNRDERGNR
|
|
16118
|
-
A0A250YDN8,
|
|
16118
|
+
A0A250YDN8,Caca-DPB1,Castor canadensis,51338,254,I,alpha,False,other_mammal,MVPEVPRTVALTMLLMVLSNPVVQGRATPENYLIQRLYECYAFNGTQRLVDRHIYNREEYARFDSDVGEFRAVTELGRPDAEYWNGQKDVLERVRASVDTVCRHNYELDEGFTLKRRVQPNVHVSPSKKGTLQHHDLLVCHVTDFYPGNIQVRWFLNGQEETAGVVSTNLIRDGDWTFQILVMLEMMPQQGDVYTCHVEHPSLQSPITVDWKAQSDSARNKKLTGVGGFVLGLIFLVVGVVVHVRSKKAQQGSR
|
|
16119
16119
|
A0A9J7F1L3,LOC100759342,Cricetulus griseus,10029,257,I,alpha,False,other_mammal,MVLCIPVSPWVAALMVLLSRGIQGGAPPDNHLLRALHECYAEDNRTQRYVMRCILDREEFMRFDSTVGEFRALTAMGRPWAESWNSQKEYMERRRAEVDTVCRHNYELNQGFTVKRRVQPKVHVSPSKKVALQHHGLLVCHATDFYPGNIQVRWFRNGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQGGDVYTCHVEHPSLQSPITVEWKVRSDSARNKMLTGVCGLVLGLIFLAVGTTMHLRCKKAQLRAPGSP
|
|
16120
16120
|
A0AA41NBW8,MHC-I,Sciurus carolinensis,30640,254,I,alpha,False,other_mammal,MFQTRAVLLRVLSLVFLLNLQGAGAIKADHVSTFAMFAQTHEPSGEYMFQFDEDEQFYVDLDKKETIWRLPEFGQAFSFDFQGGLTNIAIIKSNLDVLIKRSNRTQAANEPPEVVVFPKEPVELGQPNTLICHVDRFFPPVLNVTWLRNGQPVTEGVSESIFLPHTDYTFHKFHYLTFLPTADDFYDCKVEHWGLEEPRLKHWEAQEPVQVTEATETVVCALGLVVGLVGIITGTVLITRALRSSRDPRARGPL
|
|
16121
16121
|
A0A091E458,MHC-I,Fukomys damarensis,885580,337,I,alpha,False,other_mammal,MPIAQRNIVPDSKQKAKKIRTQIRKVHPDKMQMPIAEDFVYQFKCQCYFTNGTQRVRYLTRYIYNREEFVRFDSDLGEHRAVTELGRPSAKYWNSQKEILDRTRAELDTVCRHNYELDIPVTVQRRVEPRVSISLSKTEALNHHNLLVCSAWDFYPQQIKVQWFRNGQEETSGVVSTPVIRNGDWTFQILVMLEMTPRQGDVYTCRVEHPSLQSPVTVEWRAQSESAQSKMLSGIGGLVLGLIFLGLGVFIRRRNQKGTRGPPPAGNEGFSPDPVLGGRGTGVGESGVRGRCTWKNSPVCGLFPAVWMRNERRSPVCQEAPEIFPRTWWHLSVALLP
|
|
@@ -16184,7 +16184,7 @@ A0A6P6EXJ9,LOC101590904,Octodon degus,10160,259,I,alpha,False,other_mammal,MSPEG
|
|
|
16184
16184
|
A0A8C6QA01,LOC103729166,Nannospalax galili,1026970,223,I,alpha,False,other_mammal,AYGTSVYQSYESRGQYTFEFDGDEEFYVDLQKKQTIWRIPAFAELTSFDPQGGLQEIATAKHNLEILIKRSNSTMATNKAPEVTVFPKSPVVLGEPNTLICFVDNIFPPVINITWLSSGHPVTAGVSETSFLSNPDHTFHKIAYLTFLPSDDDVYDCKVEHWGLEEPYLKHWEPEIPAPMSELTETMVCALGLAVGLMGIVVGTIFIIQGLRSGGASRHPGPL
|
|
16185
16185
|
A0A6P6EXF3,LOC101593233,Octodon degus,10160,255,I,alpha,False,other_mammal,MILTRALVLEVFAVTALMSLCGGEDIKADHVAAFGLAMFQSYGESGQYTFELDGDEQLYVDQGKKQTIWRLPLFTEFTGFDPQGGLTEIATTKHNLAVLTKRSNSTPATNEVPEVTVFPKHPVVLGEPNTLICVVDNIFPPVINITWLSNGRSVTEGVSETSFLSKTDHSFHKIAYLTFIPSADDIYDCKVEHWGLGKPLLKHWEPEIPAPMSELTETVVCALGLIVGLVGIMVGTVFIIRGLRSGGASQHLGPL
|
|
16186
16186
|
A0A8C2VJZ5,LOC102021172,Chinchilla lanigera,34839,255,I,alpha,False,other_mammal,MIPNKALVLGVFALTAVTSLCGGEDIEADHVGSFGISMYQSYGPSGQYTFELDGDEMFYVDLEKKQTEWRLPLFTEFTSFDPQGGLREIATAKHNLGILIKSSNSTPATNKVPEVTVFPKSPVMVGEPNTLICVVDNIFPPVINITWLTNGHSVTEGVSETSFLSKSDHSFLKIAYLTFLPSEDDIYDCKVEHWGLDEPLLKHWEPEIPAPMSELTETVVCALGLTVGLVGIVVGTIFIIRGLRSGSASRHLGPL
|
|
16187
|
-
A0A0P6JUN1,
|
|
16187
|
+
A0A0P6JUN1,Hegl-DQB1,Heterocephalus glaber,10181,269,I,alpha,False,other_mammal,MPVRMALQTPRGLGTAAVLVVLVVLSSPVAEGRDTPKDSVYQFKFQCYFTNGTQRVRLVTRNIYNREEFARFDSEVGEYRAVTELGRPDAEYWNSQKEILERTRAELDTVCRHNYELEELFVLQRRVEPMVTISPSKTEALNHHNLLVCSVSDFYPGQVKVRWFRNGQEETAGVVSTPVIRNGDWTFQILVMLEMTPQRGDVYTCHVEHPSLQSPITVEWRAQSESAQSKMLSGIGGFVLGLIFLGLGVFIRRRSQKGTRGPPPAGLLH
|
|
16188
16188
|
A0A1S3GNT8,LOC105999877,Dipodomys ordii,10020,257,I,alpha,False,other_mammal,MILQVPKVAWPITLMVSLVMWCNSMAQSRATPENYVLLALQECYALNGTQRFVERHIYNREEHVRFDSEVGEFRAVTELGRPDAEYWNSQQDYLEQKRAAVDTVCRHNYELDEGFTLKRRVQPKVHVSPSKKGSLEHHNMLVCRVTDFYPGNIEIKWFRNGQEEKDGVVSTSLVHNGDWTFQIMVMLEMTPQQGDVYTCHVEHPSLDGPVTVEWRAQSDSARSKMLTGVGGFVLGLIFLTVGTIMRVRSKKAPQAPR
|
|
16189
16189
|
A0A1U7R3T9,LOC101822719,Mesocricetus auratus,10036,264,I,alpha,False,other_mammal,MVPCAPASPWVAALMVLLSRGIQGGAPPENHLLRALHECYAENNGTQRYIMRCILDREEFMRFDSTVGEFRALTAMGRPWAESWNSQKEYMERRRAEVDTVCRHNYELNQGFTVKRRVQPKVHVSPSKKVTLQHHGLLVCHVTDFYPGSIQVRWFRNGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQRGDIYTCHVEHPSLQSPVTVEWKVGSDSARNKMLTGVCGLVLGLIFLAVGVAMHLRCKKGSTCRGVHQLPAFHEL
|
|
16190
16190
|
A0A3Q0CG40,LOC101843733,Mesocricetus auratus,10036,256,I,alpha,False,other_mammal,MMGLCLPRGPCVAAAVLTLMALSPPVALVRDPRPRFLEQLKAECHYLNGTEHVKIVTRFIYNQEEFVNFDSDIGKFLAVTELGKPIAEDLNSQKEVLDHYRASVDRCRNSYRLVDWFLLNVKAEPHVTVYQTKTQPLEHQNLLVCSVSGFYPGHIEIRWFRNGQEEKTGVVSTGLIRNGDWTFQILVMLETVPQSGEVYTCQVEHPSLSSPDTVEWRAPSTSTQNKIWSGVIFVLGLLLPIGQFMYFRNPRGLLTD
|
|
@@ -16282,7 +16282,7 @@ A0A9J7K0N8,Ciita,Cricetulus griseus,10029,1152,I,alpha,False,other_mammal,MNHFEA
|
|
|
16282
16282
|
A0AAU9Z3N8,Ciita,Phodopus roborovskii,109678,1101,I,alpha,False,other_mammal,MNHFQAILAQVQTLLSGQQPRQVQALLDGLLEEELLSPEYHCALLREPDVEALARKISLTLLEKEDLGLACSSWVRSKLQALAVERATSYRDHGEPDTDTINCDQFSKLLQDIEGDEETREAYANIAELDQYVFQDTQLEGLSKDLFIEHIGAEEGFSESMEVPVEAGQRTQKRRSPEEHPMDLKHRKLVPPSRSSLTCLDLPIGHIQLLPTLPQGLWQISGTGTGLPSVLIYHGEMSQVNQAVPSGSPTVSSLPKCPDRPCSTSPFAPSEADLPSMPEPALTSRINEAEDTTSPSPCQEGSESSIKLPKWPESVERFQHSLKDKYLVEPENLSCPLVAVELVRGRLERGSNKSQERELATPDWTERQLAHGGLAEVLQAVVDRRRLRETQVVAVLGKAGQGKSHWAQMVSQAWARGQLPQYDFVFYVPCHCLYHPGDTFHLQDLLCPPSLQPLVMDDEVLGHIVRQPHRVLLILDAFEELEAQDGLLHGPLPPEPCSFRGLLAGLFQRKLLRGCTLLLTARPRGRLTQSLSKADAIFEVPSFSTKQAQTYMRHYFENSGTTGDKDKALGLLEGQPFLLTHSHSPALCRAVCQLSKALLEQGTETQLPCTLTGLYVGLLGPAIQDSPPGALAELAKLAWELGRKHQSTLQETKLLSVEVKTWAVTQGLVQPTLGTTETQLAFSSFLLQCFLGAVWLAQCNEIRDKELPQYLALTPRKKRPYDNWLEGVPRFLTGLVFQPQAHCLGAVVEPAVADRKRKVLTRYLKRLQLQSLRAGRLLELLHCAHETQEPGIWEHVAHQLPGHLSFLGTRLTPPDVHMLGRALQTASQDFSLDLRQTGIEPSGLGNLVGLSCVTSFRAALSDTMVLWESLRQQGEPQLLQAAEEKFTIEPFKAKSPKDVEDLDRLVQTQRLRNPSEDAALDLPAIQDLKKLEFALGPVLGPQAFPTLVKILPEFSSLQHLDLDSLSENKIGDEGVLKLSATFPQLKVLETLNLSQNSITDVGACKLAEALPALAKSLLRLSLYNNCICDAGAKSLAQVLPDMVSLRVMDVQFNKFTAAGAQQLASSLQKCPQVETLAMWTPTIPFGVQEHLQQLDARISLR
|
|
16283
16283
|
A0A8C6ADX9,LOC107160869,Marmota marmota marmota,9994,333,I,alpha,False,other_mammal,MKKQQEVSQPTGSHSLRYFDTSVSRPGHGKPRFISVGYVDDTQFVRFDSDTENPREEARAPWMEQEGSEFWDQITQISTSNAHHHLVCLNNLRGYYNQSEGGSHILQRIWGCDVGPDRRFLRGYKQYAYDGKDYISLNEDLSSWTSADAAARNTQRKLEAAGDAEHSRAYLEGTCVEELLRYLENGKEALQRLDPPKTHLTHHTSPDGDVTLKCWALGFYPKEITLNWQRDGEDQIQDMELVETRPAGDGNFQKWAAVVVSAGEEQRYTCHVHHEGLPEPLILRWEPPSQPIMGIVAGLVLLGAVITGAVVPFVLWKKKNTGRKSAGSEFLFH
|
|
16284
16284
|
I3NH74,LOC101967717,Ictidomys tridecemlineatus,43179,335,I,alpha,False,other_mammal,MARRTLFLVLLGVLALTETWAGSHSLRYFDIAMTWPGRREYQYMTVGYVDDTQFVLFDSYAANPRMEPRAQWMDQVGPEYWEDQTRICKNSAQIDLGNLRNLLRYHNQSEGGSHTLQWTLGCEVGPDGRLLRGYRQAAYDGVDYLALNEDLHSWTAVDAAARITLHKWDTEFYRAYLEGPCVEWLHRYLEKGKEVLQRSDPPKTRVTYHPSPEGDITLRCWALGFYPKEITLIWQRDGEDQTQEMELVETRPAGDGTFQKWAAVVVPAGEEQRYTCHMHHEGLPEPLTLRWEPPSQSTIPVMGIVVGLVLLIAVVTGAVVSVMMQRRNADRRGVI
|
|
16285
|
-
A0A0P6J4Z9,
|
|
16285
|
+
A0A0P6J4Z9,Hegl-A,Heterocephalus glaber,10181,363,I,alpha,False,other_mammal,MGVMAPRALLLLLSGALVLPETRAGSHSMRYFDIAVSRPGQGEPRYLEVGYVDDTQFVRFDSDAASPRVEPRAAWMERVDQAYWDRETRRAKGNAQLYRVNLQTALRYYNQTEAGSHTFQRMYGCEVGSDGRLLRGYTQWAYDGADYIALAEDLSSWVAADTAALITQRKWVEAGVAERDRAYLEGTCVEWLRRHLENGKEQLQRTDPPETRVTRHPFSKEEVTLRCWALGFYPAEISVTWQRDGQDLTQDMELVETRPAGDGTFQTWAAVAVPSGEEQHYTCRVQHEGLPEPRTLTWERPLHPTMSRGVEVIAVTAALLGVVLIAVVAVGMWRRKRAGGKGASYGPAASSDRAQGSDSSVMA
|
|
16286
16286
|
A0A8J6H2F3,MHC-I,Microtus ochrogaster,79684,410,I,alpha,False,other_mammal,MYGCEVGSDGRLLRGYRQDAYDGLDYIALNDDLTTWTAADTAAQITKRKWERDGYAERLKAVLEDECVQWLRRYLENGKDALQRSDPPKAHVTHHPGPKGDVTLRCWAMGFYPAAISLIWKREEEEQTQDMELVETRPSGDGTFQKWASLVVPSGEEQRYTCQVHHEGLPEPLTLRWEPPQSTVPIMAVIGGLVLLGAVIIGAVVAVVRKRRRNPGGKGGDYAPAPDPPKAHVTHHPGPKGDVTLRCWALGFYPAAISLTWKREEEEQTQDMELVETRPSGDGTFQKWASLVVPSGEEQRYTCQVHHEGLPESLTLRWEPPQSTVPIMAVIAGLVLLGAVIIGAVVAVVRKRRRNPGRKGGNYAPASARLSAAAQSTMYVFSARLLAGREPVSLGSLRGKVLLIENVASL
|
|
16287
16287
|
I3ND89,LOC101967338,Ictidomys tridecemlineatus,43179,351,I,alpha,False,other_mammal,MGVVAPRELLLLLLGTLALTDIWAGSHSLRYFDTSVSRPGHGKPRFISVGYVDDTQFVRFDSDAENPREEARAPWIEQEGSEFWDQITQISTSNAHHHLVCLNNLRGYYNQSEGGSHILQRIWGCDVGPDRRFLRGYKQYAYDGKDYISLNEDLSSWTSADAAALNTQRKLEAAGDAEHSRAYLEGTCVEELLRYLENGKDTLQRLDPPKTHLTHHTSPDGDVTLKCWALGFYPKEITLNWQRDGEDQIQDLELVETRPAGDGNFQKWAAVVVRAGEEQRYTCHVHHEGLPEPLILRWEPPSQPIMGIVAGLVLLGAVVTGAVVPFVLWKKKNTGRKSNDSAQDSDVSLTA
|
|
16288
16288
|
A0A091D3H6,MHC-I,Fukomys damarensis,885580,551,I,alpha,False,other_mammal,MAPRTLLLLLSGALVLPETWAGSHSLRYFDIAVSRPGRGEPRFMSVGYVDDTQFVRFDSDALDPRVEPRAAWMEKVDQAYWDRETKRAEDTAEAFRVNLRTLRGYYNQSEDGSHTLQWTSGCEMGSNGHLLRGYAQFAYDGEDYLYLNEDLNSWTAMDTAAQISRTKSEAAGETEEQRAYVEGECMEWLGRYLEAGKETLQRSEPPETHVTRHPVSKEEVTLRCWALGFYPAEISLTWQRGGQDLTQDTELVETRPAGDGTFQKWAAVAVPSGEEQHYMCRVQHEGLPEPRTLMWERPLPPTISRGVEVVVVIAALLGVLVIVAAVAVVMWRRKRADHRSAPPLGCPAVCAIGRFGGTWPFQLEAKQHHLENETSAVHLHCPECMAPLNALHGSAFALGEEEPEAEAGGLLTPLTLSSPRSRVRNPADLGTTADRLAYAPRLSGLVPENPLSDQGHLFGGRRRGALLWLLLSFAQTAHPRSRPLQYFYWTVSEPGHTVPRFTASGFVDNQPFIRYDSEVVEAKPLVPWLKEDKSYFDNETKIFASRMKVFQ
|
|
@@ -16950,7 +16950,7 @@ A0AA41T4X7,MHC-I,Sciurus carolinensis,30640,568,I,alpha,False,other_mammal,MAPRT
|
|
|
16950
16950
|
A0A8C5JW53,LOC101593689,Jaculus jaculus,51337,220,I,alpha,False,other_mammal,TFLEQGKHECHFYNGTQRVRFLDRYFYNGEEYVRFDSDVGEYRAVTELGRPDAPYWNGQKEFLERKRAQVDAYCRHNYEILRRFLVPRRVEPRVTVHPAKTQPVQHHNLLVCSVDGFYPGAIEVSWFLNGHEETAGVVSTGLIRNGDWTFQMLVMLEMVPRRGEVYTCRVQHPSLPNPMSVEWRAQSGSAQSKMLSGVGGIVLGLLFLGAGLFIHCRSPK
|
|
16951
16951
|
A0A8C6GWD5,MHC-I,Mus spicilegus,10103,271,I,alpha,False,other_mammal,CGDLRSEQGRTWVWSVIRAAERDSGILSAEKKITLVSTAQFLEQFKFECYFYNGTQRVRLLVRSIYNREEYARFDSDVGEYRAVTELGRPDAEYWNSQKEVLEQKRAEVDTVCRHNYEISDKFLVPRRAEPTVTVYPTKTQPLEHHNLLVCSVSDFYPGNIEVRWFRNGKEEKTGIVSTGLVRNGDWTFQTLVMLETVPQSGEVYTCQMEHPSLTDPVTVEWKAQSTSAQNKMLSGVGGFVLGLLFLGAGLFIYFRNQKGQSGLQPTGLLS
|
|
16952
16952
|
A0A8C9QQ87,MHC-I,Spermophilus dauricus,99837,247,I,alpha,False,other_mammal,MNPLSVGSGLNSLIFRAIPVLEVALSWSPSFFSPLEDFVIQAKADCYFTNGTEKVQFVVRFIFNLEEYARFDSDLGVFVALTELGLLDAEQWNNRPDILERSRASVDMLCRHNYNLGAPFTSLKKLLLWLEKTPFLHQHNLLLCSVTGFYPGDIKIRWFWNGQEERAGVMSTGLIRNGDWTFQTMVMLEVSPSPGDVYSCLVEHPSLPSPVSVEWSELWFDHFGKSIGGCVIFHQKTCNSTCIRRVL
|
|
16953
|
-
A0A8D2ILG1,
|
|
16953
|
+
A0A8D2ILG1,Urpa-DRA,Urocitellus parryii,9999,248,I,alpha,False,other_mammal,MHXFSSSPHPDSLLNSRFCISEDHTIIQAEFYLHPDELGEYMFDFDGDEILHVDSKIKETVWRLKEFGQFASFEAQGALANLAVDKANLDIMMKRSNNTWDSNVPPEVTVLSSGPVELGEPNVLICFIDKFSPPVVNVRWLKNGQPVTTGVSETVFLPRKDQLFRKFHYLPFLPSNEDFYDCEVDHLGLEKPLLKHWXFEEQTPLPETKENVVCALGLLVGLVGIIMGTIFIIKGTQKSHTGERRGPL
|
|
16954
16954
|
A0ABQ0FNY0,MHC-I,Apodemus speciosus,105296,242,I,alpha,False,other_mammal,MSSAPVLWDGLQNHTFRHTLFCQDGIPNLGLSETYDEDELFSFDFSQNIRVPRLPDFAAWAQEQGDASAIDFDKGFCQMLMEQVSPQLEGQIPVSRGLPAAEVFTLKPLEFGKPNTLVCFISNLFPPTLTVTWQLHSAPVEGASPTSISALDGLTFQAFSYLNFTPQPFDLYSCTVTHEIDRYTAIAYWVPQNALPSDLLENALCGVAFGLGVLGIVLGIVFFVCSQRPCSGVLILPKENLE
|
|
16955
16955
|
A0A8C5JUC0,LOC101593689,Jaculus jaculus,51337,264,I,alpha,False,other_mammal,MVWLSRDPSVVALMVTMMVLSPWLALARDSRATFLEQGKHECHFYNGTQRVRFLDRYFYNGEEYVRFDSDVGEYRAVTELGRPDAPYWNGQKEFLERKRAQVDAYCRHNYEILRRFLVPRRVEPRVTVHPAKTQPVQHHNLLVCSVDGFYPGAIEVSWFLNGHEETAGVVSTGLIRNGDWTFQMLVMLEMVPRRGEVYTCRVQHPSLPNPMSVEWRAQSGSAQSKMLSGVGGIVLGLLFLGAGLFIHCRSPKGHPGVPPTGLLS
|
|
16956
16956
|
A0A8C9QGQ0,MHC-I,Spermophilus dauricus,99837,281,I,alpha,False,other_mammal,MIFFPLSFEASSILERLIILLSHFLLFRMGSAWAPWVTALLALSWSPSFFSPLEDFVIQAKADCYFTNGTEKVQFVVRFIFNLEEYARFDSDLGVFVALTELGLLDAEQWNNRPDILERSRASVDMLCRHNYNLGAPFTVGRKVQPEVTVYPEKTPFLHQHNLLLCSVTGFYPGDIKIRWFWNGQEERAGVMSTGLIRNGDWTFQTMVMLEVSPSPGDVYSCLVEHPSLPSPVSVEWSEYFVIPSLFIHCILFAIFTALFALWVQKSIVGNTVGALAQLKD
|
|
@@ -16960,7 +16960,7 @@ A0A8C8UHY7,MHC-I,Peromyscus maniculatus bairdii,230844,175,I,alpha,False,other_m
|
|
|
16960
16960
|
A0A8C8UJR7,MHC-I,Peromyscus maniculatus bairdii,230844,297,I,alpha,False,other_mammal,CLVMWLQLVLGLGCVPVPTARFLLQLKAECRYLNGRERVRSVTRFIYNQEEFARFDSDVGKFLAVTELGQPIAEDLNSQKDVLDNYRASVDRCRNNYALVEWFLLKLKAEPKVTVYPTKTRPLDHHNLLVCSVSGFYPGHIEVRWFRNGQEEKTGVVSTGLIRNGDWTFQTLVMLETVPQSEEVYTCQVEHASLTSPATVKWRAQSTSARSKTLSGVVVGVLGLLSFAGGLFICFRNRQVKSLVVVHSLHSTSGESGCWLCCGAAPRVWPLRAAAMPVEESADWKNHSHGYLFRVLF
|
|
16961
16961
|
Q31288,MHC RT1.DOalpha,Rattus sp,10118,220,I,alpha,False,other_mammal,MVLFVELVQVFLTIMSFLGPRGVWDIKADHMGSYGPAFYQSYDASGQFTHEFDGAQIFSVDLKKGEVVWRLPEFADFAYSDFQSGLMSISMIRAHLDVLVERSNRTRAVSVPPRVTVFPKSRVELGKPNVLICMVEDIFPPMINITWLRNSQPITKGVTQTSFYSQPNHRFRKFHYLTFVPTAEDVYDCRVEHWGLDAPLLQHWEPQVLTPPPDTTETLI
|
|
16962
16962
|
Q6LCY4,H-2E beta,Mus musculus domesticus,10092,120,I,alpha,False,other_mammal,VWLPRVPCVAAVILLLTVLSPPVALVRDSRPWFLEYCKSECHFYNGTQRVRFLKRYFYNLEENLRFDSDVGEFRAVTELGRPDAENWNSQPEILEQKRAAVDTYCRHNYEIFDNFLVRRR
|
|
16963
|
-
A0A8C6ACX2,
|
|
16963
|
+
A0A8C6ACX2,Mama-DOB,Marmota marmota marmota,9994,268,I,alpha,False,other_mammal,MSSAWAPWVTALLVNLIRLNFSMTQDRDSPEDFVIQAKADCYFTNGTEKVKFVVRFIFNLEEYARFDSDLGVFVALTELGQPDAEQWNNRPDILERSRASVDMLCRHNYNLGAPFTVGRKVQPEVTVYPEKTPFLHQHNLLLCSVTGFYPGDIKIRWFWNGQEERAGVMSTGLIRNGDWTFQTTVMLEVTPSPGDVYRCLVEHPSLPSPVSVEWRAQHEYSWKKILSGVGAFLLGLTVLLVGIIIHLRARKGNEPLKPCHLPCFFPGF
|
|
16964
16964
|
A0A8C6R148,LOC103741888,Nannospalax galili,1026970,253,I,alpha,False,other_mammal,MVCPWLPRGPCLAALTVILMVLSPPVALVRDPRPRFLLQLKAECHYTDGREHVWSVTRFIYNQEEFARFDSDFGKFLATTELGRPIADDLNSQKDIVDNYRASVDRCRNDYEFVDIYLLKLKKKPQVTVHPSKTQHVQHHSLLVCAVSGFYPSKIKITWLRNGQEEKDEVMSTGLIPNGDWTYQTLVMLETVPQSGDVYTCQVEHPSLPSPVTVEWRARSGSAQSKMLSGLGGFVLGLLFLGVGLFVYFKNLE
|
|
16965
16965
|
A0A8C8UDQ7,MHC-I,Peromyscus maniculatus bairdii,230844,269,I,alpha,False,other_mammal,MDVGDNWVLRLSGYSCRAMNGISLSLRTEHSWSHDSGDHARFLLQLKAECRYLNGRERVRSVTRFIYNQEEFARFDSDVGKFLAVTELGQPIAEDLNSQKDVLDNYRASVDRCRNNYALVEWFLLKLKAEPKVTVYPTKTRPLDHHNLLVCSVSGFYPGHIEVRWFRNGQEEKTGVVSTGLIRNGDWTFQTLVMLETVPQSEEVYTCQVEHASLTSPATVKWSEWEAPDPETPRPPGRGRGLPQPISSLTLRLPAHQVGGVAYSTGNNA
|
|
16966
16966
|
A0A8C8VSP9,MHC-I,Peromyscus maniculatus bairdii,230844,263,I,alpha,False,other_mammal,MMGLWLPRGPCVAAVVLMLMVLSRPVALVRDPQSRFLLQLKAECRYLNGRERVRSVTRFIYNQEEFARFDSDVGKFLAVTELGQPIAEDLNSQKDVLDNYRASVDRCRNNYALVEWFLLKLKAEPKVTVYPTKTRPLDHHNLLVCSVSGFYPGHIEVRWFRNGQEEKTGVVSTGLIRNGDWTFQTLVMLETVPQSEEVYTCQVEHASLTSPATVKWSEWEAPDPETPRPPGRGRGLPQPISSLTLRLPAHQVGGVAYSTGNNA
|
|
@@ -17089,13 +17089,13 @@ G3HQR6,MHC-I,Cricetulus griseus,10029,209,I,alpha,False,other_mammal,MGAVAPRTLLL
|
|
|
17089
17089
|
Q9XR33,H2-T23,Mus musculus castaneus,10091,196,I,alpha,False,other_mammal,LQLLVSATVPTQSSSHSLRYFHTAMSRPGLGEPRFIVVGYVDDTQFVSFDSDSENPKMEPRARWMEQEGPEYWERETWKARDMGRNFRVNLRTLLGYYNQSKDESHTLQWMYGCDVGPDGRLLRGYCQEAYDGQDYISLNEDLRSWTATDFASQISKHKSEAVDEAHQQRAYLQGPCVEWLHTYLRLGNKTLKRSD
|
|
17090
17090
|
Q9XR35,H2-T23,Mus musculus castaneus,10091,196,I,alpha,False,other_mammal,LQLLVSATVPTQSSPHSLRYFHTAVSRPGLGEPRFIIVGYVDDTQFVRFDSDAENPRMEPRARWIEQEGPEYWERETWKARDMGRNFRVNLRTLLGYYNQSNDESHTLQWMYGCDMGPDGRLLRGYCQEAYDGQDYISLNEDLRSWTANDIASQISKHKSEAVDEAHQQRAYLQGPCVEWLHRYLRLGNETLQRSD
|
|
17091
17091
|
A0A8B7UNK5,LOC109686705,Castor canadensis,51338,236,I,alpha,False,other_mammal,MGSYGPAFYQSYCTSGQFTHEFDGDQLFSVELKNREVVWRLPEFGDFTHFDLQGGLSSIAMIKVHLDVLVERSNRTRATSVPPRVTVLPKSRVELGEPNILICIVDNIFPPVINVSWLRNGQTITEGVAQTSFYSQPDHLFRKFHYLTFVPSAEDVYDCKVEHWGLEGPLLKHWELQGPTPPPDTIDTIVYVVGLAIGLVGFLVGTILIITGTVMSRAHRCRSPRSLGVEGRRWAI
|
|
17092
|
-
A0A8D2KE98,
|
|
17093
|
-
A0A8D2KF11,
|
|
17092
|
+
A0A8D2KE98,Urpa-DPB1,Urocitellus parryii,9999,254,I,alpha,False,other_mammal,GDGSTPAALLLKVILSVFPEVENYLYQSRVDCYASHGTQRFVDRYLYNREEYVRFDSDVGEFRAVTELGRPVAEYFNSQKDILEDHRAAVDTVCRHNYEVIERYTVQRRGETKVHVSPTKKGTLQHHNMLVCHVTDFYPGNIXVRWFLNGQEETAGVVATELIRNGDWTFQILVMLETTPKQGDVYTCHVEHPSLNSPVTVEWKAQSDSARNKTLTGVGGFVLGLIFLVVGVFMHKRSKKGKKARGRRRLAFLE
|
|
17093
|
+
A0A8D2KF11,Urpa-DPB1,Urocitellus parryii,9999,250,I,alpha,False,other_mammal,MLLETPGLFSSSGKNYLYQSRVDCYASHGTQRFVDRYLYNREEYVRFDSDVGEFRAVTELGRPVAEYFNSQKDILEDHRAAVDTVCRHNYEVIERYTVQRRGETKVQPKVHVSPTKKGTLQHHNMLVCHVTDFYPGNIXVRWFLNGQEETAGVVATELIRNGDWTFQILVMLETTPKQGDVYTCHVEHPSLNSPVTVEWKAQSDSARNKTLTGVGGFVLGLIFLVVGVFMHKRSKKGKKARGRRRLAFLE
|
|
17094
17094
|
A0A091CWQ1,MHC-I,Fukomys damarensis,885580,304,I,alpha,False,other_mammal,MTRGAGKALANQDRPKATYQLGEGVREPGLQGRQLPPAEWCEGMDREPGRGAAPLPLLRLLWLLPHSWAVLAAHTPVWRDDLQNHTFRHTVFCQEGTPSIGLSESYDEDQLFSFDFSKNTRVPRLPEFTDWAQDLSDASAIAFDKDFCSAMVQQLDPIFDGQIPVSRGFPIPEVFTLKPLEFGKPNTLVCLVSNLFPPMLTVSWQHNSEPVEGAGPTFVSAVDGLGFEAFSYLNFTPEYSDVFSCMATHEIDSYTAIAYWVPHNALPSDLLENVLCGVGFGLGVLGIIVGTFLIAYFRGPCSGD
|
|
17095
17095
|
A0A091CXW4,MHC-I,Fukomys damarensis,885580,301,I,alpha,False,other_mammal,MGSGWVGWVLVPLVSLTRLESSTTEGRESPEDFVIQAKADCYFTNGTEKVQFVVRFIFNLEEFVRFDSDVGVFVALTELGKPDAEQWNNRPDILETSRASVDMVCRRNYRLGAPFTLGRRVEPLVTVYPERTPFPQQHNLLLCSVTGFYPGDIKIQWFRNGQEERAGVVSSGLIRNGDWTFQTAVMLEMTPELGDVYSCRVEHSSLLSPVAVEWRAQSEYCWGKMLSGVAASLLGLIFLLLGFFIHFRAWKGSVETRSDNEVNYISSSVSLDGRPFSQFFGQKEMLWGQGGEEGVADGTVS
|
|
17096
17096
|
A0A1U8D0X8,LOC101844256,Mesocricetus auratus,10036,262,I,alpha,False,other_mammal,MGAGRAPWVVALLVNLMRPDSFMSEGRDPPEDFVIQAKADCYFTNGTEEVRFLVRFIFNLEEYLHFDSDLGVFVALTELGEPDAEQWNKRWDLLEQSRASVNLVCRQNYKLGAPFTVEREVPPEVTVFPERTPLLQQHNLLLCSASGFYPGDIKVRWFRNGQEERSGVASTGLIRNGDWTFQITVMLEVIPELGDIYSCLVEHPSLQIPVSVEWMAQSEYSWEKILSGGVAFLLGLIVFLAGVVTHLKARKASVEFQSDREV
|
|
17097
17097
|
A0A5E4D8B3,MHC-I,Marmota monax,9995,338,I,alpha,False,other_mammal,MSSAWAPWVTALLVNLIRLNFSMTQDRDSPDFVIQAKADCYFTNGTEKVKFVVRFIFNLEEYARFDSDLGVFVALTELGQPDAEQWNNRPDILERSRASVDMLCRHNYNLGAPFTVGRKVQPEVTVYPEKTPFLHQHNLLLCSVTGFYPGDIKIRWFWNGQEERAGVMSTGLIRNGDWTFQTTVMLEVTPSPGDVYSCLVEHPSLPSPVSVEWRAQHEYSWKKILSGVGAFLLGLTVLLVGIIIHLRARKGSVETQSGDKVISLIPCLWVAYSDSALARGSQRGKGGRGWSRLVVCLLSSWNGGWGCFMRPSSLFLQISRAILQKPYSDPNQSFSPET
|
|
17098
|
-
A0A8D2HBI5,
|
|
17098
|
+
A0A8D2HBI5,Urpa-DPB1,Urocitellus parryii,9999,253,I,alpha,False,other_mammal,QQHHSLPSSSCPRSFSRRPLPAENYLYQSRVDCYASHGTQRFVDRYLYNREEYVRFDSDVGEFRAVTELGRPVAEYFNSQKDILEDHRAAVDTVCRHNYELDEGFTLKRRVQPKVHVSPTKKGTLQHHNMLVCHVTDFYPGNIXVRWFLNGQEETAGVVATELIRNGDWTFQILVMLETTPKQGDVYTCHVEHPSLNSPVTVEWKAQSDSARNKTLTGVGGFVLGLIFLVVGVFMHKRTQMTRSGAQAHVGSX
|
|
17099
17099
|
A0AA41MGX6,MHC-I,Sciurus carolinensis,30640,393,I,alpha,False,other_mammal,SLGGFVAHVESTCLLDDDRTPKEFTYCVSFNKDLLACWNPEAGKIAPCEFGTLNFLAQDISEYLNRNDNLLQRLRNGLQDCDTHTQPFWKSLTNRTRPPTVQVAQTTPFNTREPVMLACYVWGFYPAEVTITWMKNGQFINPNNSAQKTAQPNGDWTYQTVSHLALTPSYGDTYTCVVEHFGTIGPILQDWTPGLSPIQIVKVSVSAVTLGLGFIIFSLGLISWRKSGSSKLGIWKGSARTMDGRLFLRSGKSQTTHSEGVLSLITAVAPGFQMLLLVLLGTGRYLQPLLQQEDCLFSVSLHHYSSSLHAPIEQWKHNFCFDAHDPRVFHSSTVRGLLERYKDPRLCMFSEPLLKISLNTTFPFSLQCTCRAVICKCTTFEGTDGPTLMLQDF
|
|
17100
17100
|
A0AA41ST26,MHC-I,Sciurus carolinensis,30640,235,I,alpha,False,other_mammal,DHMGSYGPAFFQSYDSSGQFTHEFDGDQLFSVDLKNGEVVWRLPEFGDFAHFDPQNGLASIAMIRAHLDVLVERSNHTRATSVSPRVTVLPKSRVELGEPNILICIVDNIFPPVINVTWLRNGRTVTEGAAQTSFYSQPDHLFRKFSYLTFVPSADDVYDCKVEHWGLEEPLLTHWEPQVPIPPPDTTETLICALGLATGLMGFLMGTILIITGTCKSSAPRCRNIGVWGWGQDS
|
|
17101
17101
|
A0ABM1UGU0,LOC101985353,Microtus ochrogaster,79684,283,I,alpha,False,other_mammal,MGAGRAHWVVALLVSTMRPASFMSEGRDSPEDFVIQAKADCYFTNGTDKVRFVVRFIFNLEEYLNFDSDLGMFVALTELGEPDAEQWNKRWDLVEQSRASVNMVCRQNYKLGAPFTVGRNVPPEVTVSPERTPLLQQHNLLLCSVTGFYPGDINVRWFRNGQEQRSGVMSTGLVRNGDWTFQMTVTLEMTPELGDVYSCLVEHPSLQSPVSVEWVAQSEYSWKKILSGGAAFLIGLIVFLVGVVIHVKARKASVETWSGDEGLRSEADKECGLSGTAYVGEKR
|
|
@@ -17116,15 +17116,15 @@ A0AAX6PKS0,LOC101700189,Heterocephalus glaber,10181,277,I,alpha,False,other_mamm
|
|
|
17116
17116
|
I3MR31,LOC101970595,Ictidomys tridecemlineatus,43179,264,I,alpha,False,other_mammal,MKKALILGALTLLAIVSPCGGENIVVSTWLRNIYQTYGDYGQFTYEFDGDELFYVDLEKKETVWRQPEFKGLRNLVVVKKKNLDTLIKDSNFTPATNEIPEVAVFPKSPVNLGIPNTLLCLVDNIFPPVINITWFCNDPLVPEGIAETTFYPKSDHSFLKFSYLTFVPSTEDFYDFKVEHWGLEEPLLKHWELELPTPKSELTETVVCALGLTLGLMDVVIGTILIIQVLHSRGTSSHQRTTCNGLTLGQGHRPHQPHADCCFR
|
|
17117
17117
|
Q9XR34,H2-T23,Mus spretus,10096,196,I,alpha,False,other_mammal,LQLLVSATVPTQSSSHSLRYFHTAMSRPGLGEPRFIVVGYVDDTQFVSFDSDSENPKMEPRARWMEQEGPEYWERETWKARDMGRNFRVNLRTLLGYYNQSKDESHTLQWMYGCDVGPDGRLLRGYCQEAYDGQDYISLNEDLRSWTATDFASQISKHKSEMVDEAHQQRAYLQGPCVEWLHTYLRLGNKTLKRSD
|
|
17118
17118
|
A0A5E4DBW8,MHC-I,Marmota monax,9995,282,I,alpha,False,other_mammal,MSSAWAPWVTALLVNLIRLNFSMTQDRDSPEDFVIQAKADCYFTNGTEKVKFVVRFIFNLEEYARFDSDLGVFVALTELGQPDAEQWNNRPDILERSRASVDMLCRHNYNLGAPFTVGRKVQPEVTVYPEKTPFLHQHNLLLCSVTGFYPGDIKIRWFWNGQEERAGVMSTGLIRNGDWTFQTTVMLEVTPSPGDVYSCLVEHPSLPSPVSVEWRAQHEYSWKKILSGVGAFLLGLTVLLVGIIIHLRARKGSVETQSGDKISRAILQKPYSDPNQSFSPET
|
|
17119
|
-
A0A8C6ADI6,
|
|
17119
|
+
A0A8C6ADI6,Mama-DPB1,Marmota marmota marmota,9994,199,I,alpha,False,other_mammal,FKSSLSNLASPCLKKRESRKDLLEDERARVDTMCRHNYETVERYTVQRRVQPKVHVSPTKKGSLQHHNMLVCHVTDFYPGNIKVRWFLNGQEETAGVVATELIRNGDWTFQIMVMLEMTPKQGDVYTCHVEHPSLNSPVTVEWKAQSDSARNKTLTGVGGFVLGLIFLVVGVFMHKRSKKGKKAWRRPRLAFLASSSAC
|
|
17120
17120
|
A0A8C6QH85,LOC103729147,Nannospalax galili,1026970,148,I,alpha,False,other_mammal,PAEEAPDMTVFPKSPVVLGEPNTLICFVDNIFPPVINITWLHNGNPVTEGVSETSFLSKTDHSFLKIAYLTFLPSDDDVYDCKVEHWGLEEPYLKHWEPEIPVPMSELTETVVCALGLAVGLVGIVVGTIFIIQGLRSGSASRRPGPL
|
|
17121
17121
|
A0AA41SWZ9,MHC-I,Sciurus carolinensis,30640,207,I,alpha,False,other_mammal,MFDFDGDEIFHVDVDKKETIWRLKEFGQFASFEAQGALANIAVDKANLDIMIKRSNHTPDSNVPPEVTVLSSGPVELGEPNVLICFIDKFSPPVVNVRWLKNGEPVTTGVSETVFLPRKDQLFRKFHYLLFLPSNEDFYDCEVDHLGLDRPLLKHWEFEEQTPLPETKENVVCALGLAVGLVGIVVGTIFIIKGTRKNPTAERRGPL
|
|
17122
17122
|
A0ABM1AQT0,LOC101984489,Microtus ochrogaster,79684,260,I,alpha,False,other_mammal,MVLRVELVLAFHTLMHFLSPQGVWAIKADHMGSYGPAFYQSYSASGQFTHEFDGEQIFSVDLKNREVVWRLPEFGASLYSNFQNGLASIAMIRAHLDVLVERSNRTRAISEPPRVTVLPKSRVELGKPNVLICVVDDIFPPVIDVTWLRNGQPVTEGVAQTSFYSQPNHRFRKFHYLTFVPSAEDVYDCRVEHWGLDQPLLQHWEPQVLTPPPETTETLICYLGLAVGFVGFLLGTVLIVTGMCLPSVRRSLIYWLPNSQ
|
|
17123
17123
|
G5C3I9,MHC-I,Heterocephalus glaber,10181,246,I,alpha,False,other_mammal,MQVTTRGQQRTDHVSLEQYQEHKIIQAEFYLSPDETGEFMFDFDGDEIFHVDVKKEQTVWRLEEFGRYASFEAQGALANLAVDKANLGIITKRSNNTPDANVPPEVTVLSHGPVELGEPNILICFIDKFSPPVLSVSWLKNGKPVTTGVSETVFLPREDHLFRKFYYLPFLPSTDDVYDCQVEHLGLDQPLLKHWEFEERSPLPETTENVVCALGLTVGLVGILVGTVLIIKGMGKNSAAGHQGPL
|
|
17124
17124
|
A0A091CYN0,MHC-I,Fukomys damarensis,885580,264,I,alpha,False,other_mammal,MRPVSQEVRFAIGARSVDAEDKKETQSLCHSGPSPHPEEHKIIQAEFYLSPDEAGEFMFDFDGDEIFHVDIKKEQTVWRLEEFGQYASFEAQGALANMAVDKANLGAMMKRSNNTPGSNVAPEVTVLSHGPVEQGEPNVLICFVDKFSPPVLSATWLKNGKPVTKGVSETVFLPREDNLFRKFYYLPFLPSIEDVYDCQVDHLGLDKPLLKHWEFEERSPVPETTENVVCALGLIVGLVGILVGTILIIKGMHKNSATGRQGPL
|
|
17125
17125
|
A0A8D2CP33,MHC-I,Sciurus vulgaris,55149,224,I,alpha,False,other_mammal,MLGKIVHQIPRGLRKAAVMVLLMMLSSPVTDSRDSPRDFVYQFKGYCYFTNGTQRVRLIARYVYNLEENVRFDSDVGEYRAVTELGRPDAEYWNSQKDVLEQTRAEVDTVCKHNYGIELRTTLKRRVEPKVTISPTRTEALNHHNLLVCSVTDFYPSQIKVRWFRNDQEETAGVVSTPLIRNGDWTFQILVMLEATPQRGDVYTCHVEHPSLQSPVTVEWRLLH
|
|
17126
|
-
A0A8D2HK71,
|
|
17127
|
-
A0A8D2HNN7,
|
|
17126
|
+
A0A8D2HK71,Urpa-DPA1,Urocitellus parryii,9999,238,I,alpha,False,other_mammal,MFQTRAVLLRALSLAFLLSLPGAGAIKADHVSIYATFAQTHAPTGEYMFELDEDEQFYVDRDKKETIWRLPEFGQVFSFDSQGGLADIAVLKSNLDIMIKRSNHTQAASEPPEVTVFPKEPVELGQPNTLICHVDRFFPPVLNVTWLRNGQPVTEGVSEXVFLPRTDYSYHRFHYLTFVPSAEDVYDCKVEHWGLEEPRLNHWGREPLSPPHPPCTLSPRTWCTTHYPSYPPRPPNGL
|
|
17127
|
+
A0A8D2HNN7,Urpa-DPB1,Urocitellus parryii,9999,281,I,alpha,False,other_mammal,SSSMMVLQAPKSPWTTALTVLLMVLSHPMVQGRATPENYVLLALQECYAFNGTQRLVERHIYNREEFVRFDSDVGEFRAVSELGRSTAKYWNSQKDILERKRAAVDTMCRHNYELDEGFTLKRRVQPKVHVSPTKKGTLQHHNMLVCHVTDFYPGNIXVRWFLNGQEETAGVVATELIRNGDWTFQILVMLETTPKQGDVYTCHVEHPSLNSPVTVEWSELPPNSPSRSHIMNSSSKVQASYLTCLYSGTTFTTMCFLYKPLRAVLNWRQWKLACLWPRGS
|
|
17128
17128
|
A0AA41SPT1,MHC-I,Sciurus carolinensis,30640,233,I,alpha,False,other_mammal,EDFVIQAKADCYFTNGTEKVQFVVRFIFNLEEYARFDSDLGIFVALTELGRPDAEHWNNCPDILERSRASVDLLCRRNYYLGAPFTVGRKVQPEVTVYPEKTPFLHQHNLLLCSVTGFYPGDIKIRWFWNGQEERAGVMSTDLLRNGDWTFQTMVMLEVTPSLGDVYSCLVEHPTLSSPISVEWRAQYEYSWKKILGGVAAFLFGLLFLLVGIVIHLRAWKGNEPLRTLPPAL
|
|
17129
17129
|
A0ABM0L7I5,LOC101994307,Microtus ochrogaster,79684,261,I,alpha,False,other_mammal,MVILPPLLLGLSLGCVGVGGFVAHVESTCLLDDDGNPQDFTYCISFNKDLLACWDPEEGKIAPCEFGMLYNLAKSISNYLNKNEQLLQRLGKGLQDCAMHTKPFWNALTHRTRPPSVQVAQTAPVNTREPVMLACYVWGFYPADVSIVWMKNGHLVMPHNNRERTAQTNGDWTYQTVSYLALTPSYGDIYTCVVQHEGTSEPVRQDWTVGLSPIQTVKVSVSATTLGLGFIIFCLGFFSWRKSRFSSYIPLPGSTYPEGRR
|
|
17130
17130
|
A0ABM2WBA5,LOC101844521,Mesocricetus auratus,10036,261,I,alpha,False,other_mammal,MAVFLPLLLGLSLGCVGVGGFVAHVESTCLLDDSGTAKDFTYCVAFNKDLLACWDPEEGKIVPCEFGVLYNLAVFISDNLNENKALLERLGNGLRDCATHTQPFWDALTQRTRPPSVQVAQTAPINTREPVMLACYVWGFYPADVNISWMKNGNFVMPHSIKESSAQTNGDWTYQTVSYLALTPSYGDIYTCVVQHSGTPEPVRQDWTVGLSPIQTVKVSVSAVTLGLGVIIFCLGFFSWRKSRLSSYIPLPGSTYPEGRH
|
|
@@ -18515,7 +18515,7 @@ A0AC58MMG7,Hm13,Castor canadensis,51338,466,I,alpha,False,other_mammal,MDSAVSDPH
|
|
|
18515
18515
|
A0ABM1ASY8,Hm13,Microtus ochrogaster,79684,394,I,alpha,False,other_mammal,MDSALSDQHNGSTEASSPANGTTRPPSTPEGIALAYGSLLLMALLPIFFGALRSVRCARGKSSSDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTISPFMNKFFPANFPNRQYQLLFTQGSGENKEEIINYEFDTKDLVCLGLSSIVGVWYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDIFWVFGTNVMVTVAKSFEAPIKLVFPQDLLEKGLEADNFAMLGLGDIVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTIFIMHIFKHAQPALLYLVPACIGFPVLVALVKGEVAEMFSYESSAVILPHTPRLTHFPTVSGSPASLADSMQQKLAGPRRRRPQNPSAM
|
|
18516
18516
|
A0AC58MMH2,Hm13,Castor canadensis,51338,434,I,alpha,False,other_mammal,MDSAVSDPHNGSTEAGGPANVTTRPPSTPEGIALAYGSLLLMALLPIFFGSLRSVRCARGKNASDMPETITSRDAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTISPFMNKFFPANFPNRQYQLLFTQGSGENKEEIVNYEFDTKDLVCLGLSSIVGVWYLLRKHWIANNLFGLAFSLNGVELLHLNNVSTGCILLGGLFIYDVFWVFGTNVMVTVAKSFEAPIKLVFPQDLLEKGLEADNFAMLGLGDIVIPGIFIALLLRFDISLKKNTHTYFYTSFAAYIFGLGLTISIMHIFKHAQPALLYLVPACIGFPILVALAKGEVTEMFRWISEHPARAEGAPSPTWGLFSLNTQPSSHSTPIQEVLRESYESSAEILPHTPRLTHFPTVSGSPASLADSMQQKLAGPRRRRPQNPSTM
|
|
18517
18517
|
A0A5E4AIS6,MHC-I,Marmota monax,9995,251,I,alpha,False,other_mammal,MVLLVPLITVFMVKLSHARTHSLRYFRLGVSDPGHGVPEFISVGYVDSHPITTYDSVTRQKEPRAPWMAENLAPDHWERYTQLLRGWQQMFKVELRRLQRHYNHSEPPLVRISRKEFFPGITTLFCRAHGFYPPEISMIWKKNGEELVQEVDYGDILPSGDGTYQTWVSVELDPQSRDIYSCHVEHCGLHVVLQGHQESESILLVMKAVFGAIVLTIVLAGVGFLAWRRRPREQNGVVYPSTRIHECSSPS
|
|
18518
|
-
A0A8D2AWL8,
|
|
18518
|
+
A0A8D2AWL8,Scvu-DMA,Sciurus vulgaris,55149,166,I,alpha,False,other_mammal,MDHEQNQGATLLQLLRLLWLLPHSWAIPAGFPVAEVFTLKPLEFGKPNTLVCFISNLFPPTLTVNWEHHSVPVEGVGPTFVSAMDGLTFQAFSYLNFTPEPYDLFSCIVTHEIDRYTAIAYWVPQNALPSDLLENVLCGVAFGLGVLGIIVGTVLIIYFRKPCSDD
|
|
18519
18519
|
A0A061HYE0,MHC-I,Cricetulus griseus,10029,611,I,alpha,False,other_mammal,MSLSTGAKATGTLKRPTSLSRHASAAGFPLSGTATLTLARGYRSPLSAASPTELPSEGPLPDGVEDISTLLADVARFAEGLEKLKEFVLRDGCLPPEEVDMLLQRCEGGVDAALQYAKDMAKYMKDLISYLDKRTTLEMEFAKGLQKVVHSCRQSITHEPHMPLLSIYSLALEQDLDFGHGMVQAAGTLQTQTFMQPLTLRRLEHERRRKEIKESWHRAQRKLQEAETNLRKAKQGYKQRCEDHDKARLQVAKAEEEQQGTGPGTGAAASKALDKRRRLEEEAKNKAEEAMATYRTCVADAKTQKQELEDTKVTALRQIQEVIRQSDQTIKSVCGGHWVGWAWGSGGDGLCLVWQGGDSGVVGQWCCLACHKKCLETLAIQCGHKKLQGRLQLFGQDFSHAARSTPDGVPFIVKKCVCEIERRALHTKGIYRVNGVKARVEKLCQAFENGKELVELSQASPHDISNVLKLYLRQEGTSTQCALLETAEGLVFPLQETEDGGRESRVASNDSDSELEEASDPDPLSSSDASALHGLSFLEQPEAQAGVEEGPQSRSGSEEQLEGEDGDLGQQLCSFNSNQSNNTALAPLPAMRLRGGQITGDNSGDRRPQFV
|
|
18520
18520
|
A0ABQ0FP68,MHC-unknown,Apodemus speciosus,105296,403,unknown,unknown,False,other_mammal,MGTLMHCPLLLLLLAAALTPTQTETITHALRPYKACASAQGPGRGSVSYNARLPGSHSLRYFATAVSRPGLGEPRFTAVGYVDNTQFMRFDSDAENPRAEPCEPWVEQMEPEYWEQETRIFKEHTQNFQTCLQNLLHLYNQSQDGMGRTEPLPGPGSHTIQDMHGCYVGSDGQFLHGHYQHAYDGHDYITLNEDLSSWTAADAVAQITQHKWEEAGVAEEYKAYLEGTCVETLHKLLANWEETQQHSDPPKTHVTRHPRPEGDVTLRCWALGFYPADITLTWQKDGEEQTQNLELVETRPAGDGTFQKWAAVVVPSGEEPRYTCHVQHEGLSQPLTLRWEPPPSTIFNMAIIAGLTVLGAVAIIGAVVAFVMKRRRNTGGKEEDYAPAGGSNSVQSSDLSLEA
|
|
18521
18521
|
A0A8C6RA43,LOC103748078,Nannospalax galili,1026970,130,I,alpha,False,other_mammal,MLACYVWGFYPADVTITWMRNGHLIAPHSSTEKTAQPNGDWTYQTVSYLALTPTYGDIYTCVVQHSGTPEPVRQNWTPGLSPVQTVKVSVSAVTLGLGFIVFCIGLRRWRKARNSSYIPLPGSSYPEGRH
|
|
@@ -20,6 +20,7 @@ from .alleles import (
|
|
|
20
20
|
normalize_allele_name,
|
|
21
21
|
normalize_mhc_class,
|
|
22
22
|
parse_allele_name,
|
|
23
|
+
parse_gene_class,
|
|
23
24
|
)
|
|
24
25
|
from .domain_grammar import NON_MHC_ACCESSIONS
|
|
25
26
|
from .domain_parsing import (
|
|
@@ -427,6 +428,16 @@ def _load_diverse_mhc_references() -> List[dict]:
|
|
|
427
428
|
if not species_category:
|
|
428
429
|
species_category = normalize_mhc_species(organism) or ""
|
|
429
430
|
|
|
431
|
+
# Override mhc_class from mhcgnomes when the CSV value is
|
|
432
|
+
# wrong or unknown — UniProt annotations frequently misclassify
|
|
433
|
+
# RT1/H-2 class II genes (DOb, Ba, Eb, DQA, etc.) as class I.
|
|
434
|
+
if gene:
|
|
435
|
+
pgc = parse_gene_class(gene)
|
|
436
|
+
if pgc and pgc.get("mhc_class") in ("I", "II"):
|
|
437
|
+
mhc_class = pgc["mhc_class"]
|
|
438
|
+
if pgc.get("chain"):
|
|
439
|
+
chain = pgc["chain"]
|
|
440
|
+
|
|
430
441
|
# Fix chain for class II unknowns: try class_ii_alpha_gene check
|
|
431
442
|
if mhc_class == "II" and chain in ("unknown", ""):
|
|
432
443
|
if gene and is_class_ii_alpha_gene(gene):
|
|
@@ -0,0 +1 @@
|
|
|
1
|
+
__version__ = "2.3.1"
|
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
Metadata-Version: 2.4
|
|
2
2
|
Name: mhcseqs
|
|
3
|
-
Version: 2.
|
|
3
|
+
Version: 2.3.1
|
|
4
4
|
Summary: MHC sequence curation and binding groove extraction
|
|
5
5
|
License-Expression: Apache-2.0
|
|
6
6
|
Classifier: Development Status :: 4 - Beta
|
|
@@ -107,7 +107,7 @@ Three sources are merged into a single dataset:
|
|
|
107
107
|
| UniProt | 20,566 | 500+ species | Curated diverse MHC, B2M, H-2 references (shipped in package) |
|
|
108
108
|
| **Total raw** | **77,576** | | |
|
|
109
109
|
| **After merge/dedup** | **55,696** | | One representative per two-field allele |
|
|
110
|
-
| **Groove OK** | **54,
|
|
110
|
+
| **Groove OK** | **54,155** | | 97.2% of representatives |
|
|
111
111
|
|
|
112
112
|
### By species category
|
|
113
113
|
|
|
@@ -115,13 +115,13 @@ Three sources are merged into a single dataset:
|
|
|
115
115
|
|---|---:|---:|---:|---:|
|
|
116
116
|
| human | 25,364 | 99.8% | 17,364 | 5,347 |
|
|
117
117
|
| nhp | 7,125 | 98.0% | 4,582 | 1,429 |
|
|
118
|
-
| bird | 9,312 | 99.
|
|
118
|
+
| bird | 9,312 | 99.1% | 553 | 558 |
|
|
119
119
|
| fish | 4,859 | 97.2% | 777 | 1,259 |
|
|
120
120
|
| ungulate | 1,768 | 96.2% | 603 | 303 |
|
|
121
|
-
| murine | 1,625 | 89.
|
|
121
|
+
| murine | 1,625 | 89.0% | 466 | 158 |
|
|
122
122
|
| carnivore | 484 | 99.6% | 164 | 0 |
|
|
123
|
-
| other_mammal | 943 | 95.
|
|
124
|
-
| other_vertebrate | 1,137 | 96.
|
|
123
|
+
| other_mammal | 943 | 95.0% | 275 | 152 |
|
|
124
|
+
| other_vertebrate | 1,137 | 96.2% | 327 | 129 |
|
|
125
125
|
|
|
126
126
|
"Groove OK" includes both full-length and fragment parses. "Full" means both groove
|
|
127
127
|
halves present (class I: α1 + α2, ~183 aa; class II: single chain's groove half with
|
|
@@ -32,6 +32,18 @@ def test_normalize_gene_fixes_lowercase_and_transferred_prefixes():
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|
32
32
|
assert normalize_gene("orni-dba", "", "Orni") == "Orni-DBA"
|
|
33
33
|
assert normalize_gene("hla-dqa1", "", "Xetr") == "Xetr-DQA1"
|
|
34
34
|
assert normalize_gene("HLADRB1 K3G42_000618", "", "Spto") == "Spto-DRB1"
|
|
35
|
+
# Transferred primate/model-organism prefixes on unrelated species
|
|
36
|
+
assert normalize_gene("PATR-A", "", "Asme") == "Asme-A"
|
|
37
|
+
assert normalize_gene("POPY-E", "", "Asme") == "Asme-E"
|
|
38
|
+
assert normalize_gene("MAMU-DRA", "", "Lost") == "Lost-DRA"
|
|
39
|
+
assert normalize_gene("Mamu-DRA", "", "Eufi") == "Eufi-DRA"
|
|
40
|
+
assert normalize_gene("MAFA-A1", "", "Rhfe") == "Rhfe-A1"
|
|
41
|
+
assert normalize_gene("SLA-DQB1", "", "Acox") == "Acox-DQB1"
|
|
42
|
+
# GOGO on Gobio gobio is legitimate (prefix collision), not an artifact
|
|
43
|
+
assert normalize_gene("Gogo-DAB1", "", "Gogo") == "Gogo-DAB1"
|
|
44
|
+
# Legitimate uses on the actual source species are preserved
|
|
45
|
+
assert normalize_gene("MAMU-DRA", "", "Mamu") == "Mamu-DRA"
|
|
46
|
+
assert normalize_gene("PATR-A", "", "Patr") == "Patr-A"
|
|
35
47
|
|
|
36
48
|
|
|
37
49
|
def test_normalize_gene_preserves_literature_prefixes():
|
mhcseqs-2.2.2/mhcseqs/version.py
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