meteoraster 2.5__tar.gz → 3.0__tar.gz

meteoraster-3.0/PKG-INFO

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+Metadata-Version: 2.4
+Name: meteoraster
+Version: 3.0
+Summary: Module for handling distributed ensemble and probabilistic forecast data (5-D meteorological rasters)
+Author-email: Jose Pedro Matos <jose.matos@tecnico.ulisboa.pt>
+License-Expression: Apache-2.0
+Project-URL: Homepage, https://github.com/FORESIGHT-ULisboa/Tethys-meteoraster
+Project-URL: Repository, https://github.com/FORESIGHT-ULisboa/Tethys-meteoraster
+Project-URL: Issues, https://github.com/FORESIGHT-ULisboa/Tethys-meteoraster/issues
+Project-URL: Changelog, https://github.com/FORESIGHT-ULisboa/Tethys-meteoraster/releases
+Project-URL: FORESIGHT, https://foresight.tecnico.ulisboa.pt/
+Keywords: meteorology,forecast,ensemble,raster,netcdf,grib,ERA5,ERA5-Land
+Classifier: Development Status :: 4 - Beta
+Classifier: Intended Audience :: Science/Research
+Classifier: Programming Language :: Python :: 3
+Classifier: Programming Language :: Python :: 3.11
+Classifier: Programming Language :: Python :: 3.12
+Classifier: Operating System :: OS Independent
+Classifier: Topic :: Scientific/Engineering :: Atmospheric Science
+Requires-Python: >=3.11
+Description-Content-Type: text/markdown
+License-File: LICENSE
+License-File: NOTICE
+Requires-Dist: numpy>=1.26
+Requires-Dist: scipy
+Requires-Dist: pandas
+Requires-Dist: xarray
+Requires-Dist: netcdf4
+Requires-Dist: h5netcdf
+Requires-Dist: h5py
+Requires-Dist: cfgrib
+Requires-Dist: cdsapi
+Requires-Dist: scikit-learn
+Requires-Dist: matplotlib
+Requires-Dist: seaborn
+Requires-Dist: statsmodels
+Requires-Dist: cartopy
+Requires-Dist: beautifulsoup4
+Requires-Dist: openpyxl
+Provides-Extra: test
+Requires-Dist: pytest; extra == "test"
+Requires-Dist: pytest-cov; extra == "test"
+Provides-Extra: build
+Requires-Dist: build; extra == "build"
+Requires-Dist: twine; extra == "build"
+Provides-Extra: dev
+Requires-Dist: pytest; extra == "dev"
+Requires-Dist: pytest-cov; extra == "dev"
+Requires-Dist: build; extra == "dev"
+Requires-Dist: twine; extra == "dev"
+Requires-Dist: jupyterlab; extra == "dev"
+Dynamic: license-file
+
+<p align="center">
+  <img src="images/foresight.png" alt="FORESIGHT" width="320">
+</p>
+
+# Tethys meteoraster
+
+<p align="center">
+  <a href="https://pypi.org/project/meteoraster/"><img src="https://img.shields.io/pypi/v/meteoraster.svg" alt="PyPI version"></a>
+  <a href="https://pypi.org/project/meteoraster/"><img src="https://img.shields.io/pypi/pyversions/meteoraster.svg" alt="Supported Python versions"></a>
+  <a href="LICENSE"><img src="https://img.shields.io/badge/license-Apache--2.0-blue.svg" alt="License: Apache-2.0"></a>
+</p>
+
+**`meteoraster`** is a Python library, developed by [FORESIGHT — Forecasting and
+Optimization for Resilient Environmental Systems through Investigation with
+Groundbreaking Hydrological Tools](https://foresight.tecnico.ulisboa.pt/), for
+**handling distributed ensemble and probabilistic meteorological forecasts**.
+
+Its core data structure, `MeteoRaster`, holds a single **5-D** array indexed by
+`[production_datetime, ensemble_member, leadtime, latitude, longitude]`, and
+wraps it with everything you need to turn raw reanalysis/forecast files into
+report-ready time series, maps and aggregated statistics:
+
+- read ERA5-Land GRIB (monthly means and hourly, with de-accumulation) into a common model,
+- crop, join, trim, resample and check the completeness of the data,
+- extract point time series or **catchment/zone aggregates from KML polygons**
+  (area-weighted, missing-data aware), as means or as exact weighted quantiles,
+- persist to compressed NetCDF (`h5netcdf`) and reload losslessly — with a read
+  path that survives an install on a different xarray,
+- **stream a file too large to hold in memory**, one production at a time,
+- and plot means, seasonal cycles, coordinates and availability with `cartopy`.
+
+Only `numpy`, `scipy`, `pandas`, `xarray`, `h5netcdf` and `h5py` are needed to read,
+write, subset and aggregate. GDAL, matplotlib, seaborn and cartopy are imported the
+moment you use them, so `import meteoraster` works in a slim container that has
+none of them.
+
+---
+
+## Features
+
+| Category | What you get |
+|---|---|
+| **Data model** | `MeteoRaster` — 5-D `[production_datetime, ensemble_member, leadtime, lat, lon]`; 2-D lat/lon grids; automatic Greenwich (0–360 → −180–180) fix and latitude flip |
+| **Format readers** | `meteoraster.utils` — `readERA5Land_monthly`, `read_ERA5Land_hourly` (GRIB via `cfgrib`) |
+| **Subsetting / merging** | `get_cropped`, `join`, `trim`, `adjust_leadtimes` |
+| **Resampling** | `resample_timestep` (pandas rules) and the standalone `Resample` class |
+| **Extraction** | `get_values_from_latlon`, `get_values_from_KML`, `get_quantiles_from_KML`, `get_values_from_latlon_by_event` |
+| **Spatial aggregation** | `meteoraster.zonal` — sparse coverage by exact fractional overlap, area-weighted means and quantiles, missing-data aware per zone |
+| **Quality / diagnostics** | `is_complete`, `get_complete_index`, `get_missing`, `get_completeness` |
+| **I/O** | `save` / `load` (compressed NetCDF via `h5netcdf`), `to_xarray`, and `meteoraster.io` for header-only and streaming reads |
+| **Visualisation** | `plot_mean`, `plot_mean_projected`, `plot_seasonal`, `plot_coordinates`, `plot_availability`, `add_shapefile`, `add_shape` |
+
+---
+
+## Installation
+
+The **core** — reading, writing, subsetting, streaming and aggregating — needs only
+`numpy`, `scipy`, `pandas`, `xarray`, `h5netcdf` and `h5py`, all pip-installable:
+
+```bat
+pip install meteoraster
+```
+
+The **geospatial and plotting extras** (**GDAL/`osgeo`**, `cartopy`, `cfgrib`) are
+most reliably installed with **conda**, and are imported only when used. Zonal
+aggregation from KML or PostGIS geometry needs GDAL; the map plots need cartopy.
+`import meteoraster` works without either — a missing one raises at the call site
+with the command to install it.
+
+Two paths follow: install the **released package from PyPI** on top of a conda
+environment (use the package), or install **from source** (develop / run the tests).
+
+### A · Install from PyPI
+
+Create a conda environment that provides the geospatial libraries, then install
+[`meteoraster`](https://pypi.org/project/meteoraster/) into it:
+
+```bat
+conda env create -f environment.yml
+conda activate tethys_rasters
+pip install meteoraster
+```
+
+Upgrading later needs no URL — `pip install --upgrade meteoraster` always picks up
+the newest release.
+
+> The package declares its pure-Python dependencies, but **GDAL is intentionally
+> not** a pip dependency (it is a system/conda package). The conda environment
+> above provides it. If you do not need zonal aggregation from vector geometry,
+> `pip install meteoraster` into any environment is enough — including a slim
+> container image, where `import meteoraster`, `save`, `load` and the streaming
+> readers all work with no GDAL, cartopy, matplotlib or seaborn present.
+
+Every release is also attached to the
+[GitHub releases page](https://github.com/FORESIGHT-ULisboa/Tethys-meteoraster/releases),
+which is useful to pin an exact build without going through PyPI:
+
+```bat
+pip install https://github.com/FORESIGHT-ULisboa/Tethys-meteoraster/releases/download/v3.0/meteoraster-3.0-py3-none-any.whl
+```
+
+### B · Install from source (development)
+
+#### 1 · Create the conda environment
+
+```bat
+conda env create -f environment.yml
+conda activate tethys_rasters
+```
+
+#### 2 · Install the package (editable) with the dev extras
+
+From the repository root:
+
+```bat
+pip install -e ".[dev]"
+```
+
+That adds `pytest`, `pytest-cov`, `build`, `twine` and `jupyterlab` on top of the
+runtime dependencies.
+
+---
+
+## Quick start
+
+> **Worked examples:** [`notebooks/`](notebooks/) holds seven short Jupyter notebooks —
+> the 5-D data model, I/O and xarray, cropping, plotting, point time series, catchment
+> aggregation from KML, and resampling. They run on the real files in
+> [tests/resources](tests/resources) and are committed **with their outputs**, so every
+> table and figure is readable on GitHub without running anything.
+
+```python
+import numpy as np
+import pandas as pd
+from meteoraster import MeteoRaster
+
+# data axes: [production_datetime, ensemble_member, leadtime, lat, lon]
+data = np.random.rand(2, 3, 2, 4, 5)
+
+mr = MeteoRaster(
+    data=data,
+    latitudes=np.linspace(40, 30, 4),       # 1-D is auto-meshed to 2-D
+    longitudes=np.linspace(-10, 10, 5),
+    production_datetime=pd.to_datetime(["2023-01-01", "2023-01-02"]).values,
+    leadtimes=np.array([pd.Timedelta(days=1), pd.Timedelta(days=2)]),
+    units="mm",
+    variable="precip",
+)
+```
+
+### Read a real dataset
+
+The ERA5-Land readers live in `meteoraster.utils` and return a ready-to-use
+`MeteoRaster`:
+
+```python
+from meteoraster.utils import readERA5Land_monthly, read_ERA5Land_hourly
+
+# monthly means: tp comes back as mm/month, t2m as degC
+era5 = readERA5Land_monthly("era5land_monthly.grib", "tp")
+
+# hourly: accumulations are de-accumulated to per-hour increments (mm/hr).
+# A CDS request omits the last hour of its final day - it is delivered with the
+# next period, so pass that file to fill it in.
+hourly = read_ERA5Land_hourly("era5land_2025_11.grib", "tp",
+                              file_next_year="era5land_2025_12.grib")
+```
+
+These need `cfgrib` and the ecCodes binary. On Windows ecCodes lives in
+`<env>/Library/bin` and is only found through `PATH`, so **activate** the conda
+environment rather than calling its `python.exe` directly — otherwise `import cfgrib`
+raises `RuntimeError: Cannot find the ecCodes library`.
+
+Anything already converted by Tethys needs no reader — `MeteoRaster.load` reads it
+directly.
+
+### Extract a point time series
+
+```python
+# DataFrame: index = production_datetime, columns = MultiIndex(leadtime, ensemble_member)
+ts = mr.get_values_from_latlon(lat=35.0, lon=0.0)
+```
+
+### Aggregate over KML zones (e.g. catchments)
+
+```python
+# agg: DataFrame indexed by production date, columns MultiIndex(zone, leadtime, ensemble_member)
+# centroids: DataFrame of zone centroids (x, y)
+agg, centroids = mr.get_values_from_KML("zones.kml", nameField="zone_id")
+```
+
+Spatial **quantiles** over the same zones, area-weighted so a cell half inside a
+zone carries half the probability mass:
+
+```python
+agg, centroids = mr.get_quantiles_from_KML("zones.kml", nameField="zone_id",
+                                           quantiles=[0.1, 0.5, 0.9])
+
+# Pool an hourly forecast into one distribution per day. `pool` names the axis
+# explicitly because "time" is the leadtime axis for a forecast and the production
+# axis for an observation raster - the event time is production + leadtime.
+agg, _ = mr.get_quantiles_from_KML("zones.kml", nameField="zone_id",
+                                   pool=("space", "leadtime"), resampling="1D")
+```
+
+The coverage is reusable, and the lower-level API needs no `MeteoRaster` at all —
+useful for caching it, or for feeding geometry straight out of PostGIS:
+
+```python
+from meteoraster import zonal
+
+coverage = zonal.coverage_from_kml("zones.kml", mr.latitudes, mr.longitudes,
+                                   name_field="zone_id")
+means = zonal.apply_coverage(coverage, mr.data)      # [..., y, x] -> [..., zone]
+
+coverage.save("coverage.npz")                        # pickle-free
+coverage = zonal.Coverage.load("coverage.npz")
+assert coverage.matches(mr.latitudes, mr.longitudes) # fingerprints the coordinates
+
+# WKB bytes or WKT work too, so PostGIS geometry needs no intermediate file
+coverage = zonal.coverage_from_geometries(mr.latitudes, mr.longitudes,
+                                          [feature.geom.wkb], ["basin"])
+```
+
+### Crop, save and reload
+
+```python
+sub = mr.get_cropped(from_lat=32, to_lat=38, from_lon=-2, to_lon=7,
+                     from_prod_date=pd.Timestamp("2023-01-02"))
+
+sub.save("forecast.nc")                 # compressed NetCDF (h5netcdf)
+reloaded = MeteoRaster.load("forecast.nc")
+```
+
+### Read a file that does not fit in memory
+
+`load()` holds the whole cube. For a large archive, read the metadata first and
+then stream one production at a time — peak memory is one block whatever the file
+size (measured 126 MB against 467 MB for `load()` on a 352 MB cube):
+
+```python
+from meteoraster import io as mrio, zonal
+
+header = mrio.read_header("archive.nct")        # coordinates, shape, units; no values
+print(header.shape, header.n_leadtimes, header.complete)
+
+coverage = zonal.coverage_from_kml("zones.kml", header.latitudes, header.longitudes,
+                                   name_field="zone_id")
+
+for production, block in mrio.iter_productions("archive.nct", reduce_members="mean"):
+    series = zonal.apply_coverage(coverage, block)   # [leadtime, zone]
+```
+
+`load()` also takes a subset directly, and casting on the way in genuinely halves
+peak memory for a float64 file rather than casting after it is already resident:
+
+```python
+mr = MeteoRaster.load("archive.nct", leadtimes=slice(0, 6), dtype="float32")
+```
+
+Reads try `h5netcdf`, then `netcdf4`, then `scipy`, and pin the decoding so a file
+written by another install returns the same dtypes. If HDF5 locking fails on a
+network share or a bind mount, set `HDF5_USE_FILE_LOCKING=FALSE` in the
+environment; the library will not set it for you.
+
+### Resample in time
+
+```python
+import numpy as np
+
+mr.resample_timestep("MS", fun=np.nanmean)   # to month start, ensemble-wise
+
+# Or resample a production×leadtime DataFrame with the standalone helper:
+from meteoraster import Resample
+resampled = Resample.resample(df, timestep_frequency="1D", resamplingType="sum")
+```
+
+### Plot
+
+```python
+ax, cbar = mr.plot_mean(central_longitude=0, coastline=True, borders=True,
+                        colorbar=True, cmap="viridis")
+mr.add_shapefile(ax, "basin.shp")
+mr.plot_seasonal(lat=35.0, lon=0.0)
+mr.plot_availability()
+```
+
+---
+
+## Project structure
+
+```
+Tethys-meteoraster/
+├── meteoraster/
+│   ├── __init__.py            # exports MeteoRaster, Resample
+│   ├── meteoraster.py         # MeteoRaster core class
+│   ├── io.py                  # portable NetCDF reads: header-only and streaming
+│   ├── zonal.py               # sparse coverage, area-weighted means and quantiles
+│   ├── resample.py            # Resample (time-step resampling of DataFrames)
+│   ├── _lazy.py               # on-demand GDAL / matplotlib / seaborn / cartopy
+│   └── utils.py               # ERA5-Land GRIB readers
+├── notebooks/                 # seven worked examples, executed (see notebooks/README.md)
+├── tests/                     # pytest suite + fixtures (conftest.py)
+│   └── resources/             # real GRIB/NetCDF inputs (see PROVENANCE.md)
+├── tools/make_fixtures.py     # regenerates the subsetted test fixtures
+├── images/foresight.png       # README header
+├── environment.yml            # conda environment (tethys_rasters)
+├── pyproject.toml             # packaging + pytest configuration
+├── AGENTS.md                  # canonical guidance for humans & AI agents
+├── CLAUDE.md                  # → points to AGENTS.md
+├── .github/copilot-instructions.md  # → points to AGENTS.md
+├── .github/workflows/release.yml    # build + publish to PyPI on tag push
+├── .github/scripts/check_version.py # release guard: version declared consistently
+├── LICENSE                    # Apache 2.0
+├── NOTICE                     # attribution required by Apache 2.0
+└── README.md
+```
+
+---
+
+## Running the tests
+
+```bat
+conda activate tethys_rasters
+pip install -e ".[dev]"
+pytest -ra
+```
+
+The suite covers construction, cropping, point/KML extraction, NetCDF round-trips,
+completeness checks, resampling and the deprecated-alias warnings. Since v3.0 it also
+runs against **real inputs** in `tests/resources` — ERA5-Land GRIB for the readers,
+converted Tethys forecasts (ECMWF SEAS5, IPMA, NOAA GFS) for the monthly adaptation and
+the resampling units contract, and a real 26-catchment KML layer for zonal aggregation.
+Those files are subsets; see
+[tests/resources/PROVENANCE.md](tests/resources/PROVENANCE.md) and
+`tools/make_fixtures.py`.
+
+Tests skip — by name, never error — when a resource is missing or when an optional
+dependency is absent, so a partial clone and a slim install both stay green. **Activate**
+the conda environment rather than calling its `python.exe` directly, or the GRIB tests
+skip on a `PATH` that hides ecCodes.
+
+---
+
+## Building a distribution (wheel + sdist)
+
+The package builds with the standard [PEP 517](https://peps.python.org/pep-0517/)
+toolchain:
+
+```bat
+conda activate tethys_rasters
+pip install -e ".[build]"
+python -m build
+```
+
+This produces both artifacts in `dist/`:
+
+```
+dist/
+├── meteoraster-3.0-py3-none-any.whl
+└── meteoraster-3.0.tar.gz
+```
+
+Install the wheel anywhere (provided GDAL is available):
+
+```bat
+pip install dist/meteoraster-3.0-py3-none-any.whl
+```
+
+Notes:
+- The version lives in [pyproject.toml](pyproject.toml) (`project.version`) and is
+  mirrored in `MeteoRaster.VERSION` — bump both together.
+  [.github/scripts/check_version.py](.github/scripts/check_version.py) enforces
+  that at release time.
+- Building by hand is only needed to inspect an artifact locally. Actual releases
+  are produced by CI — see [Releasing](#releasing) below.
+
+---
+
+## Releasing
+
+Releases are automated by
+[.github/workflows/release.yml](.github/workflows/release.yml). To cut version
+`X.Y`:
+
+1. Bump the version in **both** [pyproject.toml](pyproject.toml) and
+   `MeteoRaster.VERSION`, then commit.
+2. Tag and push:
+
+   ```bat
+   git tag vX.Y
+   git push origin vX.Y
+   ```
+
+The workflow then verifies the two version declarations agree with the tag, builds
+the wheel and sdist, runs `twine check --strict`, publishes to
+[PyPI](https://pypi.org/project/meteoraster/), and attaches both artifacts to the
+GitHub release.
+
+To rehearse without touching PyPI, run the workflow manually from the **Actions**
+tab and leave the target as `testpypi`; it builds and uploads to
+[TestPyPI](https://test.pypi.org/project/meteoraster/) with no tag required.
+
+> **PyPI uploads are immutable** — a version number can never be reused, even
+> after deletion. Get the version right before pushing the tag.
+
+### One-time setup (maintainers)
+
+Publishing is authenticated with
+[PyPI Trusted Publishing](https://docs.pypi.org/trusted-publishers/) (OIDC):
+GitHub mints a short-lived credential at publish time that PyPI accepts only for
+this repository, this workflow file and this environment. **No API token is
+created, stored or pasted anywhere.** Every value below is a public fact about
+the repository — none of it is a secret, which is precisely the point.
+
+**On PyPI** — once per index (repeat on [TestPyPI](https://test.pypi.org/) if you
+want the rehearsal path):
+
+1. *Your account → Publishing → Add a pending publisher* → GitHub, and fill in:
+
+   | Field | Value |
+   |---|---|
+   | PyPI project name | `meteoraster` |
+   | Owner | `FORESIGHT-ULisboa` |
+   | Repository | `Tethys-meteoraster` |
+   | Workflow name | `release.yml` |
+   | Environment | `pypi` (on TestPyPI: `testpypi`) |
+
+   The environment name must match the `environment:` key of the corresponding
+   job in [release.yml](.github/workflows/release.yml), or PyPI rejects the
+   exchange. A *pending* publisher is what you register before the project exists
+   on an index; it turns into an ordinary one on the first successful upload.
+
+**On GitHub** — once:
+
+2. *Settings → Environments* → create `pypi` (and `testpypi`).
+3. Add a **required reviewer** to `pypi`. Every publish then pauses for an
+   explicit approval, so a tag push alone cannot ship a release.
+
+Things worth keeping that way:
+
+- **Do not add a PyPI API token to repository secrets.** Trusted Publishing
+  exists to remove that long-lived credential; a token in secrets is usable by
+  any workflow in the repository and stays valid until someone revokes it.
+  Nothing here needs one.
+- The publisher trusts the workflow **by filename**, so anyone able to change
+  [release.yml](.github/workflows/release.yml) or push a `v*` tag can trigger a
+  publish. Protect `main` and restrict who may push tags; the environment
+  reviewer from step 3 is the backstop.
+- Only the two publish jobs request `id-token: write`; the build job is
+  `contents: read` and the workflow default is `permissions: {}`. Keep that split
+  when editing it — the job that produces the artifacts never holds the identity
+  that can upload them.
+
+---
+
+## API reference
+
+### `MeteoRaster`
+
+**Construction & conversion**
+
+| Member | Description |
+|---|---|
+| `MeteoRaster(data, latitudes, longitudes, production_datetime, leadtimes, units='unknown', variable='unknown', …)` | Build from a 5-D array (or a dict with the same keys). 1-D lat/lon are auto-meshed to 2-D; longitudes are wrapped to [−180, 180] and latitudes flipped if needed. |
+| `copy()` | Deep copy. |
+| `to_xarray()` | Convert to a labelled `xarray.DataArray`. |
+
+**Subsetting, merging & resampling**
+
+| Member | Description |
+|---|---|
+| `get_cropped(from_prod_date, to_prod_date, from_lat, to_lat, from_lon, to_lon, from_leadtime, to_leadtime)` | Crop in time and space; returns a new `MeteoRaster`. |
+| `join(meteoRaster, strickt=False, trim=False)` | Concatenate another raster along production dates (aligns ensembles/leadtimes). |
+| `trim()` | Drop leading/trailing all-NaN production dates. |
+| `adjust_leadtimes(period='months')` | Align leadtimes to relative periods (experimental). |
+| `resample_timestep(rule, fun=np.mean)` | Resample production dates with pandas rules (experimental). |
+
+**Extraction & aggregation**
+
+| Member | Description |
+|---|---|
+| `get_values_from_latlon(lat, lon)` | Time series from the nearest pixel as a `DataFrame`. |
+| `get_values_from_KML(kml, nameField=None, …)` | Area-weighted aggregate over KML polygons → `(agg, centroids)`. |
+| `get_quantiles_from_KML(kml, nameField=None, quantiles=…, pool=('space',), resampling=None, …)` | Area-weighted spatial quantiles over KML zones → `(agg, centroids)`. `pool` names the axes folded into the sample; `resampling` is the block size within a pooled time axis. |
+| `get_values_from_latlon_by_event(production_date_dataframe)` | *(static)* Reindex a production-date frame by event date. |
+
+Since **v3.0** `get_values_from_KML` runs on `meteoraster.zonal` (below). Its numbers
+changed for any zone touching the edge of the grid: the legacy builder gave the
+outermost row and column no weight and took its validity threshold from the first
+zone. `ensemble_member` labels are now 0-based, matching the other extractors.
+
+**`meteoraster.zonal`** — needs no `MeteoRaster`; takes plain coordinate arrays.
+
+| Member | Description |
+|---|---|
+| `coverage_from_kml(kml, latitudes, longitudes, name_field=None, …)` | Build a `Coverage` from KML Placemark polygons. Namespace-agnostic, and it does not touch the input file. |
+| `coverage_from_geometries(latitudes, longitudes, geometries, names=None, …)` | Same from `ogr.Geometry`, WKB bytes or WKT — so PostGIS geometry feeds straight in. |
+| `apply_coverage(coverage, values, min_coverage=0.8)` | Area-weighted mean per zone of any array whose last two axes are (y, x). Renormalises for missing data and applies the threshold per zone and per slice. |
+| `quantiles_from_coverage(coverage, values, quantiles, pool_axes=(), …)` | Area-weighted spatial quantiles per zone. |
+| `weighted_quantiles(values, weights, quantiles, method='hazen')` | The quantile primitive. Reduces exactly to `np.quantile` for equal weights. |
+| `Coverage.save/load`, `Coverage.matches`, `grid_fingerprint` | Persist a coverage to a pickle-free `.npz` and check it against a grid; the fingerprint hashes the coordinates, so a shifted grid of the same shape is a miss. |
+| `cell_corners`, `cell_areas`, `cell_bounds` | The grid geometry, extrapolated half a cell at the boundary so no cell is skipped. |
+
+**`meteoraster.io`** — the portable read path.
+
+| Member | Description |
+|---|---|
+| `read_header(file)` | `Header` with coordinates, shape, dtype, units and the `complete` flag; reads no values. |
+| `iter_productions(file, productions=None, leadtimes=None, reduce_members=None, dtype=None)` | Yield `(production_datetime, block)`; peak memory is one block. |
+| `read_cube(file, …)` | Fill a whole or partial cube production by production. |
+| `open_raster(file, engine=None, **kwargs)` | Context manager over `xr.open_dataset` with engine fallback and pinned decoding. |
+| `read_completeness(file)` | The `complete` flag alone; `None` when the file has none. |
+| `available_engines()` | Which of `h5netcdf`, `netcdf4`, `scipy` this install can use. |
+
+**Quality & diagnostics**
+
+| Member | Description |
+|---|---|
+| `is_complete(full_ensemble=True, space_completeness=False)` | Whether every production×leadtime slice has finite data. |
+| `get_complete_index(full_ensemble=True, space_completeness=False)` | Boolean `DataFrame` (production × leadtime) of completeness. |
+| `get_missing()` | Fraction of missing pixels per leadtime/ensemble member. |
+| `get_completeness(file)` | *(classmethod)* Read the `complete` flag from a saved file. |
+
+**I/O**
+
+| Member | Description |
+|---|---|
+| `save(file, complevel=1, complete=None, tmp_dir=None, mode=0o644, engine=None)` | Write compressed NetCDF via `h5netcdf`. Staged in the destination directory and swapped in with `os.replace`, so nothing goes through the system temp dir and the swap is atomic. |
+| `load(file, verbose=None, productions=None, leadtimes=None, dtype=None, engine=None)` | *(classmethod)* Reload a NetCDF written by `save`, optionally only part of it. |
+| `read_header(file)` / `iter_productions(file, …)` | *(classmethods)* Metadata-only and streaming reads; see `meteoraster.io`. |
+
+**Visualisation**
+
+| Member | Description |
+|---|---|
+| `create_plot(central_longitude, …)` | Create a `cartopy` axes. |
+| `plot_mean(ax=None, coastline=False, borders=False, colorbar=True, cmap='viridis', …)` | Map of the ensemble/temporal mean → `(ax, cbar)`. |
+| `plot_mean_projected`, `plot_coordinates`, `plot_seasonal`, `plot_availability` | Projected mean, grid coordinates, seasonal cycle, data availability. |
+| `add_shapefile(ax, shapefile_path, …)` / `add_shape(ax, path, …)` | Overlay shapefile geometries/boundaries. |
+
+> Deprecated camelCase aliases (`getCropped`, `getValuesFromKML`,
+> `getDataFromLatLon`, `getQuantilesFromKML`, `resampleTimeStep`) still work but
+> emit a `DeprecationWarning`; use the snake_case names above.
+
+### `Resample`
+
+| Member | Description |
+|---|---|
+| `Resample.resample(data, timestep_frequency, resamplingType, date_from=None, date_to=None, print_func=None)` | *(classmethod)* Resample a production×leadtime `DataFrame`. `resamplingType` ∈ {`'sum'`, `'mean'`, `'linear'`, `'max'`}. |
+
+---
+
+## License
+
+Licensed under the **Apache License, Version 2.0** — see [LICENSE](LICENSE) and
+[NOTICE](NOTICE).