metbit 5.2.0__tar.gz → 5.2.2__tar.gz

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (29) hide show
  1. {metbit-5.2.0 → metbit-5.2.2}/PKG-INFO +2 -2
  2. {metbit-5.2.0 → metbit-5.2.2}/metbit/lazy_opls_da.py +2 -1
  3. {metbit-5.2.0 → metbit-5.2.2}/metbit/metbit.py +11 -10
  4. {metbit-5.2.0 → metbit-5.2.2}/metbit.egg-info/PKG-INFO +2 -2
  5. {metbit-5.2.0 → metbit-5.2.2}/setup.py +2 -2
  6. {metbit-5.2.0 → metbit-5.2.2}/LICENSE +0 -0
  7. {metbit-5.2.0 → metbit-5.2.2}/README.rst +0 -0
  8. {metbit-5.2.0 → metbit-5.2.2}/metbit/__init__.py +0 -0
  9. {metbit-5.2.0 → metbit-5.2.2}/metbit/base.py +0 -0
  10. {metbit-5.2.0 → metbit-5.2.2}/metbit/boxplot.py +0 -0
  11. {metbit-5.2.0 → metbit-5.2.2}/metbit/cross_validation.py +0 -0
  12. {metbit-5.2.0 → metbit-5.2.2}/metbit/denoise_spec.py +0 -0
  13. {metbit-5.2.0 → metbit-5.2.2}/metbit/dev.py +0 -0
  14. {metbit-5.2.0 → metbit-5.2.2}/metbit/genpage.py +0 -0
  15. {metbit-5.2.0 → metbit-5.2.2}/metbit/opls.py +0 -0
  16. {metbit-5.2.0 → metbit-5.2.2}/metbit/pca_ellipse.py +0 -0
  17. {metbit-5.2.0 → metbit-5.2.2}/metbit/peak_processe.py +0 -0
  18. {metbit-5.2.0 → metbit-5.2.2}/metbit/plotting.py +0 -0
  19. {metbit-5.2.0 → metbit-5.2.2}/metbit/pls.py +0 -0
  20. {metbit-5.2.0 → metbit-5.2.2}/metbit/pretreatment.py +0 -0
  21. {metbit-5.2.0 → metbit-5.2.2}/metbit/scaler.py +0 -0
  22. {metbit-5.2.0 → metbit-5.2.2}/metbit/spec_norm.py +0 -0
  23. {metbit-5.2.0 → metbit-5.2.2}/metbit/utility.py +0 -0
  24. {metbit-5.2.0 → metbit-5.2.2}/metbit/vip.py +0 -0
  25. {metbit-5.2.0 → metbit-5.2.2}/metbit.egg-info/SOURCES.txt +0 -0
  26. {metbit-5.2.0 → metbit-5.2.2}/metbit.egg-info/dependency_links.txt +0 -0
  27. {metbit-5.2.0 → metbit-5.2.2}/metbit.egg-info/requires.txt +0 -0
  28. {metbit-5.2.0 → metbit-5.2.2}/metbit.egg-info/top_level.txt +0 -0
  29. {metbit-5.2.0 → metbit-5.2.2}/setup.cfg +0 -0
@@ -1,9 +1,9 @@
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  Metadata-Version: 2.1
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  Name: metbit
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- Version: 5.2.0
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+ Version: 5.2.2
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  Summary: Metabolomics data analysis and visualization tools.
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  Home-page: https://github.com/aeiwz/metbit.git
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- Download-URL: https://github.com/aeiwz/metbit/archive/refs/tags/V5.2.0.tar.gz
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+ Download-URL: https://github.com/aeiwz/metbit/archive/refs/tags/V5.2.2.tar.gz
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  Author: aeiwz
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  Author-email: theerayut_aeiw_123@hotmail.com
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  License: MIT
@@ -203,13 +203,14 @@ class lazy_opls_da:
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  if marker_color is None:
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+ import plotly.colors as plotly_colour
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  name_color_set = ['Plotly', 'D3', 'G10', 'T10', 'Alphabet', 'Dark24', 'Light24', 'Set1', 'Pastel1',
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  'Dark2', 'Set2', 'Pastel2', 'Set3', 'Antique', 'Safe', 'Bold', 'Pastel',
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  'Vivid', 'Prism']
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  palette = []
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  for name in name_color_set:
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- palette += getattr(pc.qualitative, name) # This is a list of colors
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+ palette += getattr(plotly_colour.qualitative, name) # This is a list of colors
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  marker_color = {}
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  for i in data['Class'].unique():
@@ -660,14 +660,14 @@ class opls_da:
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  if color_dict is not None:
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  color_dict = color_dict
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  else:
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-
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+ import plotly.colors as plotly_colour
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  name_color_set = ['Plotly', 'D3', 'G10', 'T10', 'Alphabet', 'Dark24', 'Light24', 'Set1', 'Pastel1',
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  'Dark2', 'Set2', 'Pastel2', 'Set3', 'Antique', 'Safe', 'Bold', 'Pastel',
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  'Vivid', 'Prism']
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  palette = []
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  for name in name_color_set:
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- palette += getattr(pc.qualitative, name) # This is a list of colors
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+ palette += getattr(plotly_colour.qualitative, name) # This is a list of colors
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  color_dict = {label: palette[i] for i, label in enumerate(df_opls_scores['Group'].unique())}
@@ -681,14 +681,14 @@ class opls_da:
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  else:
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  # Assign a default color if the label is not found in the original color_dict
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-
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+ import plotly.colors as plotly_colour
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  name_color_set = ['Plotly', 'D3', 'G10', 'T10', 'Alphabet', 'Dark24', 'Light24',
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  'Set1', 'Pastel1', 'Dark2', 'Set2', 'Pastel2', 'Set3',
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  'Antique', 'Safe', 'Bold', 'Pastel', 'Vivid', 'Prism']
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  palette = []
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  for name in name_color_set:
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- palette += getattr(pc.qualitative, name) # This is a list of colors
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+ palette += getattr(plotly_colour.qualitative, name) # This is a list of colors
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  color_dict_2[group] = palette[len(color_dict_2) % len(palette)]
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@@ -1480,7 +1480,8 @@ class pca:
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  if color_dict is not None:
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  color_dict = color_dict
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  else:
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-
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+
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+ import plotly.colors as plotly_colour
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  name_color_set = ['Plotly', 'D3', 'G10', 'T10', 'Alphabet', 'Dark24', 'Light24', 'Set1', 'Pastel1',
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  'Dark2', 'Set2', 'Pastel2', 'Set3', 'Antique', 'Safe', 'Bold', 'Pastel',
@@ -1488,7 +1489,7 @@ class pca:
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  palette = []
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  for name in name_color_set:
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- palette += getattr(pc.qualitative, name) # This is a list of colors
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+ palette += getattr(plotly_colour.qualitative, name) # This is a list of colors
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  color_dict = {i: palette[i] for i in range(len(df_scores_['Group'].unique()))}
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@@ -1748,14 +1749,14 @@ class pca:
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  color_dict = color_dict
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  else:
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-
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+ import plotly.colors as plotly_colour
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  name_color_set = ['Plotly', 'D3', 'G10', 'T10', 'Alphabet', 'Dark24', 'Light24', 'Set1', 'Pastel1',
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  'Dark2', 'Set2', 'Pastel2', 'Set3', 'Antique', 'Safe', 'Bold', 'Pastel',
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  'Vivid', 'Prism']
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  palette = []
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  for name in name_color_set:
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- palette += getattr(pc.qualitative, name) # This is a list of colors
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+ palette += getattr(plotly_colour.qualitative, name) # This is a list of colors
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  color_dict = {i: palette[i] for i in range(len(df_scores_point['Group'].unique()))}
@@ -1953,14 +1954,14 @@ class pca:
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  color_dict = color_dict
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  else:
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-
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+ import plotly.colors as plotly_colour
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  name_color_set = ['Plotly', 'D3', 'G10', 'T10', 'Alphabet', 'Dark24', 'Light24', 'Set1', 'Pastel1',
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  'Dark2', 'Set2', 'Pastel2', 'Set3', 'Antique', 'Safe', 'Bold', 'Pastel',
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  'Vivid', 'Prism']
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  palette = []
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  for name in name_color_set:
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- palette += getattr(pc.qualitative, name) # This is a list of colors
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+ palette += getattr(plotly_colour.qualitative, name) # This is a list of colors
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  color_dict = {i: palette[i] for i in range(len(df_scores_['Group'].unique()))}
@@ -1,9 +1,9 @@
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  Metadata-Version: 2.1
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  Name: metbit
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- Version: 5.2.0
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+ Version: 5.2.2
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  Summary: Metabolomics data analysis and visualization tools.
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  Home-page: https://github.com/aeiwz/metbit.git
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- Download-URL: https://github.com/aeiwz/metbit/archive/refs/tags/V5.2.0.tar.gz
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+ Download-URL: https://github.com/aeiwz/metbit/archive/refs/tags/V5.2.2.tar.gz
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  Author: aeiwz
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  Author-email: theerayut_aeiw_123@hotmail.com
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  License: MIT
@@ -12,13 +12,13 @@ DESCRIPTION = '\n\n'.join(LOAD_TEXT(_) for _ in [
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  setup(
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  name = 'metbit',
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  packages = ['metbit'],
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- version = '5.2.0',
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+ version = '5.2.2',
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  license='MIT',
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  description = 'Metabolomics data analysis and visualization tools.',
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  author = 'aeiwz',
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  author_email = 'theerayut_aeiw_123@hotmail.com',
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  url = 'https://github.com/aeiwz/metbit.git',
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- download_url = 'https://github.com/aeiwz/metbit/archive/refs/tags/V5.2.0.tar.gz',
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+ download_url = 'https://github.com/aeiwz/metbit/archive/refs/tags/V5.2.2.tar.gz',
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  keywords = ['Omics', 'Multivariate analysis', 'Visualization', 'Data Analysis', 'Metabolomics', 'Chemometrics'],
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  install_requires=[
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  'scikit-learn',
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