metacountregressor 0.1.312__tar.gz → 0.1.314__tar.gz

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Files changed (31) hide show
  1. {metacountregressor-0.1.312/metacountregressor.egg-info → metacountregressor-0.1.314}/PKG-INFO +1 -1
  2. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor/solution.py +31 -9
  3. {metacountregressor-0.1.312 → metacountregressor-0.1.314/metacountregressor.egg-info}/PKG-INFO +1 -1
  4. metacountregressor-0.1.314/version.txt +1 -0
  5. metacountregressor-0.1.312/version.txt +0 -1
  6. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/LICENSE.txt +0 -0
  7. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/MANIFEST.in +0 -0
  8. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/README.md +0 -0
  9. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/README.rst +0 -0
  10. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor/__init__.py +0 -0
  11. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor/_device_cust.py +0 -0
  12. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor/app_main.py +0 -0
  13. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor/data_split_helper.py +0 -0
  14. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor/halton.py +0 -0
  15. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor/helperprocess.py +0 -0
  16. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor/main.py +0 -0
  17. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor/main_old.py +0 -0
  18. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor/metaheuristics.py +0 -0
  19. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor/pareto_file.py +0 -0
  20. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor/pareto_logger__plot.py +0 -0
  21. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor/setup.py +0 -0
  22. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor/single_objective_finder.py +0 -0
  23. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor/test_generated_paper2.py +0 -0
  24. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor.egg-info/SOURCES.txt +0 -0
  25. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor.egg-info/dependency_links.txt +0 -0
  26. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor.egg-info/not-zip-safe +0 -0
  27. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor.egg-info/requires.txt +0 -0
  28. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/metacountregressor.egg-info/top_level.txt +0 -0
  29. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/setup.cfg +0 -0
  30. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/setup.py +0 -0
  31. {metacountregressor-0.1.312 → metacountregressor-0.1.314}/tests/test.py +0 -0
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: metacountregressor
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- Version: 0.1.312
3
+ Version: 0.1.314
4
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  Summary: Extensive Testing for Estimation of Data Count Models
5
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  Home-page: https://github.com/zahern/CountDataEstimation
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  Author: Zeke Ahern
@@ -1035,9 +1035,9 @@ class ObjectiveFunction(object):
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1035
 
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  abct = []
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  hetro_long = hetro_long + hetro_std
1038
- for i in model_nature['transfrom_hetro']:
1038
+ for i in model_nature['transform_hetro']:
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  abct = abct + i
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- for i in model_nature['transfrom_hetro']:
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+ for i in model_nature['transform_hetro']:
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  abct = abct + ['']
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  else:
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  big_hetro = []
@@ -5954,7 +5954,7 @@ class ObjectiveFunction(object):
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  def hessian_loglik_function(self, params, *args):
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  return self._loglik_gradient(params, *args)
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- def _run_optimization(self, XX, y, dispersion, initial_params, bounds, tol, mod):
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+ def _run_optimization(self, XX, y, dispersion, initial_params, bounds, tol, mod, maxiter):
5958
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  """
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  Run the optimization process with draws logic and update the Solution object.
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@@ -5971,19 +5971,20 @@ class ObjectiveFunction(object):
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  Solution object with updated objectives.
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  """
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  # Extract relevant data
5974
- X, Xr, XG = mod.get('X'), mod.get('Xr'), mod.get('XG')
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+ X, Xr, XG, XH= mod.get('X'), mod.get('Xr'), mod.get('XG'), mod.get('XH')
5975
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  distribution = mod.get('dist_fit')
5976
5976
 
5977
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  # Prepare draws
5978
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  draws = self._prepare_draws(Xr, distribution)
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  draws_grouped = self._prepare_grouped_draws(XG, mod) if XG is not None else None
5980
-
5980
+ mod = self._prepare_hetro(mod)
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  # Optimization method and options
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  method = self.method_ll if bounds is None else 'L-BFGS-B'
5983
5983
 
5984
5984
 
5985
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  #method = 'Nelder-Mead-BFGS'
5986
- options = {'gtol': tol['gtol'], 'ftol': tol['ftol'], 'maxiter': 20000}
5986
+
5987
+ options = {'gtol': tol['gtol'], 'ftol': tol['ftol'], 'maxiter': maxiter}
5987
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  args=(
5988
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  X, y, draws, X, Xr, self.batch_size, self.grad_yes, self.hess_yes, dispersion, 0, False, 0,
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  self.rdm_cor_fit, None, None, draws_grouped, XG, mod
@@ -6329,7 +6330,7 @@ class ObjectiveFunction(object):
6329
6330
 
6330
6331
  return initial_params
6331
6332
 
6332
- def fitRegression(self, mod, dispersion=0, maxiter=20000, batch_size=None, num_hess=False, **kwargs):
6333
+ def fitRegression(self, mod, dispersion=0, maxiter=20, batch_size=None, num_hess=False, **kwargs):
6333
6334
  """
6334
6335
  Fits a Poisson regression, NB regression (dispersion=1), or GP regression (dispersion=2).
6335
6336
 
@@ -6367,7 +6368,7 @@ class ObjectiveFunction(object):
6367
6368
 
6368
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  # Run optimization
6369
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  optimization_result = self._run_optimization(
6370
- XX, y, dispersion, initial_params, bounds, tol, mod
6371
+ XX, y, dispersion, initial_params, bounds, tol, mod, maxiter=maxiter
6371
6372
  )
6372
6373
 
6373
6374
  # Post-process results
@@ -6450,6 +6451,27 @@ class ObjectiveFunction(object):
6450
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  return self.prepare_halton(
6451
6452
  n_random_effects, n_samples, self.Ndraws, distribution, long=False, slice_this_way=self.group_halton
6452
6453
  )
6454
+
6455
+ def _prepare_hetro(self, mod):
6456
+ if 'XH' in mod and len(mod.get('hetro_hold')) > 0:
6457
+
6458
+ XH = mod.get('XH')
6459
+
6460
+ styd = list(mod.get('hetro_hold').keys())
6461
+
6462
+ nh, ph, ______ = XH.shape
6463
+ kgh = len(mod.get('hetro_hold'))
6464
+ draws_hetro = self.prepare_halton(kgh, nh, self.Ndraws, styd, slice_this_way=self.group_halton)
6465
+ mod['draws_hetro'] = draws_hetro.copy()
6466
+ if self.is_multi:
6467
+ XHtest = mod.get('XH_test')
6468
+ nht, pht, ______ = XHtest.shape
6469
+ draws_hetro_test = self.prepare_halton(kgh, nht, self.Ndraws, styd,
6470
+ slice_this_way=self.group_halton_test)
6471
+ mod['draws_hetro_test'] = draws_hetro_test.copy()
6472
+ return mod
6473
+
6474
+
6453
6475
 
6454
6476
  def _prepare_grouped_draws(self, XG, mod):
6455
6477
  """
@@ -7290,7 +7312,7 @@ class ObjectiveFunction(object):
7290
7312
  X_h_test = df_test[:, :, indices_hetro]
7291
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  x_h_storage_test.append(X_h_test)
7292
7314
  model_nature['x_h_storage'] = x_h_storage
7293
- model_nature['transfrom_hetro'] = transform_hetro
7315
+ model_nature['transform_hetro'] = transform_hetro
7294
7316
  model_nature['x_h_storage_test'] = x_h_storage_test
7295
7317
 
7296
7318
  if hasattr(self, 'group_dummies'):
@@ -1,6 +1,6 @@
1
1
  Metadata-Version: 2.4
2
2
  Name: metacountregressor
3
- Version: 0.1.312
3
+ Version: 0.1.314
4
4
  Summary: Extensive Testing for Estimation of Data Count Models
5
5
  Home-page: https://github.com/zahern/CountDataEstimation
6
6
  Author: Zeke Ahern
@@ -0,0 +1 @@
1
+ 0.1.314
@@ -1 +0,0 @@
1
- 0.1.312