melage 0.0.65__tar.gz

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  1. melage-0.0.65/CITATION.cff +24 -0
  2. melage-0.0.65/MANIFEST.in +10 -0
  3. melage-0.0.65/PKG-INFO +742 -0
  4. melage-0.0.65/README.md +677 -0
  5. melage-0.0.65/melage/__init__.py +16 -0
  6. melage-0.0.65/melage/cli.py +4 -0
  7. melage-0.0.65/melage/graphics/GLGraphicsItem.py +286 -0
  8. melage-0.0.65/melage/graphics/GLViewWidget.py +595 -0
  9. melage-0.0.65/melage/graphics/Transform3D.py +55 -0
  10. melage-0.0.65/melage/graphics/__init__.py +8 -0
  11. melage-0.0.65/melage/graphics/functions.py +101 -0
  12. melage-0.0.65/melage/graphics/items/GLAxisItem.py +149 -0
  13. melage-0.0.65/melage/graphics/items/GLGridItem.py +178 -0
  14. melage-0.0.65/melage/graphics/items/GLPolygonItem.py +77 -0
  15. melage-0.0.65/melage/graphics/items/GLScatterPlotItem.py +135 -0
  16. melage-0.0.65/melage/graphics/items/GLVolumeItem.py +280 -0
  17. melage-0.0.65/melage/graphics/items/GLVolumeItem_b.py +237 -0
  18. melage-0.0.65/melage/graphics/items/__init__.py +0 -0
  19. melage-0.0.65/melage/graphics/shaders.py +202 -0
  20. melage-0.0.65/melage/main.py +270 -0
  21. melage-0.0.65/melage/requirements22.txt +25 -0
  22. melage-0.0.65/melage/requirements_old.txt +28 -0
  23. melage-0.0.65/melage/resource/0circle.png +0 -0
  24. melage-0.0.65/melage/resource/0circle_faded.png +0 -0
  25. melage-0.0.65/melage/resource/3d.png +0 -0
  26. melage-0.0.65/melage/resource/3d.psd +0 -0
  27. melage-0.0.65/melage/resource/3dFaded.png +0 -0
  28. melage-0.0.65/melage/resource/Eraser.png +0 -0
  29. melage-0.0.65/melage/resource/EraserFaded.png +0 -0
  30. melage-0.0.65/melage/resource/EraserX.png +0 -0
  31. melage-0.0.65/melage/resource/EraserXFaded.png +0 -0
  32. melage-0.0.65/melage/resource/Eraser_icon.svg +79 -0
  33. melage-0.0.65/melage/resource/Hand.png +0 -0
  34. melage-0.0.65/melage/resource/HandIcons_0.png +0 -0
  35. melage-0.0.65/melage/resource/Hand_IX.png +0 -0
  36. melage-0.0.65/melage/resource/Hand_IXFaded.png +0 -0
  37. melage-0.0.65/melage/resource/Handsqueezed.png +0 -0
  38. melage-0.0.65/melage/resource/Handwriting (copy).png +0 -0
  39. melage-0.0.65/melage/resource/Handwriting.png +0 -0
  40. melage-0.0.65/melage/resource/HandwritingMinus.png +0 -0
  41. melage-0.0.65/melage/resource/HandwritingMinusX.png +0 -0
  42. melage-0.0.65/melage/resource/HandwritingPlus.png +0 -0
  43. melage-0.0.65/melage/resource/HandwritingPlusX.png +0 -0
  44. melage-0.0.65/melage/resource/Move_icon.svg +8 -0
  45. melage-0.0.65/melage/resource/PngItem_2422924.png +0 -0
  46. melage-0.0.65/melage/resource/about.png +0 -0
  47. melage-0.0.65/melage/resource/about_logo.png +0 -0
  48. melage-0.0.65/melage/resource/about_logo0.png +0 -0
  49. melage-0.0.65/melage/resource/action_check.png +0 -0
  50. melage-0.0.65/melage/resource/action_check_OFF.png +0 -0
  51. melage-0.0.65/melage/resource/arrow).png +0 -0
  52. melage-0.0.65/melage/resource/arrow.png +0 -0
  53. melage-0.0.65/melage/resource/arrowFaded.png +0 -0
  54. melage-0.0.65/melage/resource/arrow_org.png +0 -0
  55. melage-0.0.65/melage/resource/arrow_org.png.png +0 -0
  56. melage-0.0.65/melage/resource/arrows.png +0 -0
  57. melage-0.0.65/melage/resource/authors.mp4 +0 -0
  58. melage-0.0.65/melage/resource/box.png +0 -0
  59. melage-0.0.65/melage/resource/check-image-icon-0.jpg +0 -0
  60. melage-0.0.65/melage/resource/circle.png +0 -0
  61. melage-0.0.65/melage/resource/circle_faded.png +0 -0
  62. melage-0.0.65/melage/resource/circle_or.png +0 -0
  63. melage-0.0.65/melage/resource/close.png +0 -0
  64. melage-0.0.65/melage/resource/close_bg.png +0 -0
  65. melage-0.0.65/melage/resource/color/Simple.txt +18 -0
  66. melage-0.0.65/melage/resource/color/Tissue.txt +24 -0
  67. melage-0.0.65/melage/resource/color/Tissue12.txt +27 -0
  68. melage-0.0.65/melage/resource/color/albert_LUT.txt +102 -0
  69. melage-0.0.65/melage/resource/color/mcrib_LUT.txt +102 -0
  70. melage-0.0.65/melage/resource/color/pediatric1.txt +29 -0
  71. melage-0.0.65/melage/resource/color/pediatric1_old.txt +27 -0
  72. melage-0.0.65/melage/resource/color/pediatric2.txt +87 -0
  73. melage-0.0.65/melage/resource/color/pediatric3.txt +29 -0
  74. melage-0.0.65/melage/resource/color/pediatrics (copy).csv +103 -0
  75. melage-0.0.65/melage/resource/color/tissue_seg.txt +4 -0
  76. melage-0.0.65/melage/resource/contour.png +0 -0
  77. melage-0.0.65/melage/resource/contour.svg +2 -0
  78. melage-0.0.65/melage/resource/contourFaded.png +0 -0
  79. melage-0.0.65/melage/resource/contourX.png +0 -0
  80. melage-0.0.65/melage/resource/contourXFaded.png +0 -0
  81. melage-0.0.65/melage/resource/dti.png +0 -0
  82. melage-0.0.65/melage/resource/dti0.png +0 -0
  83. melage-0.0.65/melage/resource/dti222.png +0 -0
  84. melage-0.0.65/melage/resource/dti_or.png +0 -0
  85. melage-0.0.65/melage/resource/eco.png +0 -0
  86. melage-0.0.65/melage/resource/eco22.png +0 -0
  87. melage-0.0.65/melage/resource/eco_old.png +0 -0
  88. melage-0.0.65/melage/resource/eco_or.png +0 -0
  89. melage-0.0.65/melage/resource/eco_or2.png +0 -0
  90. melage-0.0.65/melage/resource/eco_seg.png +0 -0
  91. melage-0.0.65/melage/resource/eco_seg_old.png +0 -0
  92. melage-0.0.65/melage/resource/export.png +0 -0
  93. melage-0.0.65/melage/resource/hand-grab-icon-10.jpg +0 -0
  94. melage-0.0.65/melage/resource/hand-grab-icon-25.jpg +0 -0
  95. melage-0.0.65/melage/resource/info.png +0 -0
  96. melage-0.0.65/melage/resource/line.png +0 -0
  97. melage-0.0.65/melage/resource/linefaded.png +0 -0
  98. melage-0.0.65/melage/resource/load.png +0 -0
  99. melage-0.0.65/melage/resource/main.ico +0 -0
  100. melage-0.0.65/melage/resource/manual_images/3D_rightc.png +0 -0
  101. melage-0.0.65/melage/resource/manual_images/3D_rightc_goto.png +0 -0
  102. melage-0.0.65/melage/resource/manual_images/3D_rightc_paint.png +0 -0
  103. melage-0.0.65/melage/resource/manual_images/3D_rightc_paint_draw1.png +0 -0
  104. melage-0.0.65/melage/resource/manual_images/3D_rightc_paint_draw2.png +0 -0
  105. melage-0.0.65/melage/resource/manual_images/3D_rightc_paint_render.png +0 -0
  106. melage-0.0.65/melage/resource/manual_images/3D_rightc_paint_render2.png +0 -0
  107. melage-0.0.65/melage/resource/manual_images/3D_rightc_paint_render3.png +0 -0
  108. melage-0.0.65/melage/resource/manual_images/3D_rightc_paint_render4.png +0 -0
  109. melage-0.0.65/melage/resource/manual_images/3D_rightc_paint_render5.png +0 -0
  110. melage-0.0.65/melage/resource/manual_images/3D_rightc_paint_render6.png +0 -0
  111. melage-0.0.65/melage/resource/manual_images/3D_rightc_seg.png +0 -0
  112. melage-0.0.65/melage/resource/manual_images/exit_toolbar.png +0 -0
  113. melage-0.0.65/melage/resource/manual_images/load_image_file.png +0 -0
  114. melage-0.0.65/melage/resource/manual_images/load_image_file_openp.png +0 -0
  115. melage-0.0.65/melage/resource/manual_images/main_page.png +0 -0
  116. melage-0.0.65/melage/resource/manual_images/menu_file.png +0 -0
  117. melage-0.0.65/melage/resource/manual_images/menu_file_export.png +0 -0
  118. melage-0.0.65/melage/resource/manual_images/menu_file_import.png +0 -0
  119. melage-0.0.65/melage/resource/manual_images/menu_file_settings.png +0 -0
  120. melage-0.0.65/melage/resource/manual_images/menu_file_ss.png +0 -0
  121. melage-0.0.65/melage/resource/manual_images/open_save_load.png +0 -0
  122. melage-0.0.65/melage/resource/manual_images/panning_toolbar.png +0 -0
  123. melage-0.0.65/melage/resource/manual_images/segmentation_toolbar.png +0 -0
  124. melage-0.0.65/melage/resource/manual_images/tab_mri.png +0 -0
  125. melage-0.0.65/melage/resource/manual_images/tab_us.png +0 -0
  126. melage-0.0.65/melage/resource/manual_images/tabs.png +0 -0
  127. melage-0.0.65/melage/resource/manual_images/toolbar_tools.png +0 -0
  128. melage-0.0.65/melage/resource/manual_images/tools_basic.png +0 -0
  129. melage-0.0.65/melage/resource/manual_images/tools_bet.png +0 -0
  130. melage-0.0.65/melage/resource/manual_images/tools_cs.png +0 -0
  131. melage-0.0.65/melage/resource/manual_images/tools_deepbet.png +0 -0
  132. melage-0.0.65/melage/resource/manual_images/tools_imageinfo.png +0 -0
  133. melage-0.0.65/melage/resource/manual_images/tools_maskO.png +0 -0
  134. melage-0.0.65/melage/resource/manual_images/tools_masking.png +0 -0
  135. melage-0.0.65/melage/resource/manual_images/tools_n4b.png +0 -0
  136. melage-0.0.65/melage/resource/manual_images/tools_resize.png +0 -0
  137. melage-0.0.65/melage/resource/manual_images/tools_ruler.png +0 -0
  138. melage-0.0.65/melage/resource/manual_images/tools_seg.png +0 -0
  139. melage-0.0.65/melage/resource/manual_images/tools_threshold.png +0 -0
  140. melage-0.0.65/melage/resource/manual_images/tools_tools.png +0 -0
  141. melage-0.0.65/melage/resource/manual_images/widget_color.png +0 -0
  142. melage-0.0.65/melage/resource/manual_images/widget_color_add.png +0 -0
  143. melage-0.0.65/melage/resource/manual_images/widget_color_add2.png +0 -0
  144. melage-0.0.65/melage/resource/manual_images/widget_color_additional.png +0 -0
  145. melage-0.0.65/melage/resource/manual_images/widget_images.png +0 -0
  146. melage-0.0.65/melage/resource/manual_images/widget_images2.png +0 -0
  147. melage-0.0.65/melage/resource/manual_images/widget_images3.png +0 -0
  148. melage-0.0.65/melage/resource/manual_images/widget_marker.png +0 -0
  149. melage-0.0.65/melage/resource/manual_images/widget_mri.png +0 -0
  150. melage-0.0.65/melage/resource/manual_images/widget_mri2.png +0 -0
  151. melage-0.0.65/melage/resource/manual_images/widget_segintensity.png +0 -0
  152. melage-0.0.65/melage/resource/manual_images/widget_tab_mutualview.png +0 -0
  153. melage-0.0.65/melage/resource/manual_images/widget_tab_mutualview2.png +0 -0
  154. melage-0.0.65/melage/resource/manual_images/widget_table.png +0 -0
  155. melage-0.0.65/melage/resource/manual_images/widget_table2.png +0 -0
  156. melage-0.0.65/melage/resource/manual_images/widget_us.png +0 -0
  157. melage-0.0.65/melage/resource/melage_top.ico +0 -0
  158. melage-0.0.65/melage/resource/melage_top.png +0 -0
  159. melage-0.0.65/melage/resource/melage_top0.png +0 -0
  160. melage-0.0.65/melage/resource/melage_top1.png +0 -0
  161. melage-0.0.65/melage/resource/melage_top4.png +0 -0
  162. melage-0.0.65/melage/resource/mri (copy).png +0 -0
  163. melage-0.0.65/melage/resource/mri.png +0 -0
  164. melage-0.0.65/melage/resource/mri0.png +0 -0
  165. melage-0.0.65/melage/resource/mri000.png +0 -0
  166. melage-0.0.65/melage/resource/mri22.png +0 -0
  167. melage-0.0.65/melage/resource/mri_big.png +0 -0
  168. melage-0.0.65/melage/resource/mri_old.png +0 -0
  169. melage-0.0.65/melage/resource/mri_seg.png +0 -0
  170. melage-0.0.65/melage/resource/mri_seg_old.png +0 -0
  171. melage-0.0.65/melage/resource/new.png +0 -0
  172. melage-0.0.65/melage/resource/open.png +0 -0
  173. melage-0.0.65/melage/resource/open2.png +0 -0
  174. melage-0.0.65/melage/resource/pan.png +0 -0
  175. melage-0.0.65/melage/resource/pencil.png +0 -0
  176. melage-0.0.65/melage/resource/pencilFaded.png +0 -0
  177. melage-0.0.65/melage/resource/points.png +0 -0
  178. melage-0.0.65/melage/resource/pointsFaded.png +0 -0
  179. melage-0.0.65/melage/resource/rotate.png +0 -0
  180. melage-0.0.65/melage/resource/ruler.png +0 -0
  181. melage-0.0.65/melage/resource/rulerFaded.png +0 -0
  182. melage-0.0.65/melage/resource/s.png +0 -0
  183. melage-0.0.65/melage/resource/s.psd +0 -0
  184. melage-0.0.65/melage/resource/save.png +0 -0
  185. melage-0.0.65/melage/resource/saveas.png +0 -0
  186. melage-0.0.65/melage/resource/seg_mri.png +0 -0
  187. melage-0.0.65/melage/resource/seg_mri2.png +0 -0
  188. melage-0.0.65/melage/resource/settings.png +0 -0
  189. melage-0.0.65/melage/resource/synch.png +0 -0
  190. melage-0.0.65/melage/resource/synchFaded.png +0 -0
  191. melage-0.0.65/melage/resource/theme/rc/.keep +1 -0
  192. melage-0.0.65/melage/resource/theme/rc/arrow_down.png +0 -0
  193. melage-0.0.65/melage/resource/theme/rc/arrow_down@2x.png +0 -0
  194. melage-0.0.65/melage/resource/theme/rc/arrow_down_disabled.png +0 -0
  195. melage-0.0.65/melage/resource/theme/rc/arrow_down_disabled@2x.png +0 -0
  196. melage-0.0.65/melage/resource/theme/rc/arrow_down_focus.png +0 -0
  197. melage-0.0.65/melage/resource/theme/rc/arrow_down_focus@2x.png +0 -0
  198. melage-0.0.65/melage/resource/theme/rc/arrow_down_pressed.png +0 -0
  199. melage-0.0.65/melage/resource/theme/rc/arrow_down_pressed@2x.png +0 -0
  200. melage-0.0.65/melage/resource/theme/rc/arrow_left.png +0 -0
  201. melage-0.0.65/melage/resource/theme/rc/arrow_left@2x.png +0 -0
  202. melage-0.0.65/melage/resource/theme/rc/arrow_left_disabled.png +0 -0
  203. melage-0.0.65/melage/resource/theme/rc/arrow_left_disabled@2x.png +0 -0
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  205. melage-0.0.65/melage/resource/theme/rc/arrow_left_focus@2x.png +0 -0
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  209. melage-0.0.65/melage/resource/theme/rc/arrow_right@2x.png +0 -0
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  249. melage-0.0.65/melage/resource/theme/rc/branch_line@2x.png +0 -0
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  496. melage-0.0.65/melage/widgets/registrationWidget.py +342 -0
  497. melage-0.0.65/melage/widgets/repeat_widget.py +74 -0
  498. melage-0.0.65/melage/widgets/screenshot_widget.py +138 -0
  499. melage-0.0.65/melage/widgets/settings_widget.py +77 -0
  500. melage-0.0.65/melage/widgets/tranformationWidget.py +275 -0
  501. melage-0.0.65/melage.egg-info/PKG-INFO +742 -0
  502. melage-0.0.65/melage.egg-info/SOURCES.txt +506 -0
  503. melage-0.0.65/melage.egg-info/dependency_links.txt +1 -0
  504. melage-0.0.65/melage.egg-info/entry_points.txt +2 -0
  505. melage-0.0.65/melage.egg-info/requires.txt +43 -0
  506. melage-0.0.65/melage.egg-info/top_level.txt +3 -0
  507. melage-0.0.65/pyproject.toml +111 -0
  508. melage-0.0.65/setup.cfg +4 -0
melage-0.0.65/CITATION.cff ADDED
@@ -0,0 +1,24 @@
1
+ cff-version: 1.2.0
2
+ title: "MELAGE: An Open-Source Python Software for Neonatal and Adult Neuroimaging"
3
+ message: "If you use this software, please cite it using the metadata below."
4
+ version: "0.1.0"
5
+ date-released: 2025-08-18
6
+ authors:
7
+ - family-names: "Jafrasteh"
8
+ given-names: "Bahram"
9
+ orcid: "https://orcid.org/0000-0002-5071-7902"
10
+
11
+ repository-code: "https://github.com/BahramJafrasteh/MELAGE"
12
+ license: "Apache-2.0"
13
+ keywords:
14
+ - neuroimaging
15
+ - MRI
16
+ - ultrasound
17
+ - segmentation
18
+ - neonatal
19
+ identifiers:
20
+ - type: url
21
+ value: "https://pypi.org/project/melage"
22
+ - type: doi
23
+ value: "10.48550/arXiv.2309.07175"
24
+
melage-0.0.65/MANIFEST.in ADDED
@@ -0,0 +1,10 @@
1
+ include README.md
2
+ include LICENSE
3
+ include CITATION.cff
4
+ recursive-include melage/resource *
5
+ recursive-include melage *.py
6
+ recursive-include melage *.json
7
+ recursive-include melage *.yaml
8
+ recursive-include melage *.yml
9
+ recursive-include melage *.txt
10
+ recursive-include melage/data *