mcp-server-pp 0.1.0__tar.gz

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+ PYPI_TOKEN=pypi-YOUR_TOKEN_HERE
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+ .env
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+ .venv/
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+ dist/
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+ *.egg-info/
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+ __pycache__/
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+ MIT License
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+
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+ Copyright (c) 2025 ELS-RJED Team
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+
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+ Permission is hereby granted, free of charge, to any person obtaining a copy
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+ of this software and associated documentation files (the "Software"), to deal
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+ in the Software without restriction, including without limitation the rights
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+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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+ copies of the Software, and to permit persons to whom the Software is
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+ furnished to do so, subject to the following conditions:
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+
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+ The above copyright notice and this permission notice shall be included in all
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+ copies or substantial portions of the Software.
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+
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+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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+ SOFTWARE.
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+ -include .env
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+
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+ .PHONY: publish test
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+
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+ publish:
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+ uv build
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+ uv publish --token $(PYPI_TOKEN)
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+
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+ test:
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+ printf '{"jsonrpc":"2.0","id":1,"method":"initialize","params":{"protocolVersion":"2024-11-05","capabilities":{},"clientInfo":{"name":"test","version":"1.0"}}}\n{"jsonrpc":"2.0","method":"notifications/initialized"}\n{"jsonrpc":"2.0","id":2,"method":"tools/list","params":{}}\n' | timeout 5 uv run mcp-server-pp
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+ Metadata-Version: 2.4
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+ Name: mcp-server-pp
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+ Version: 0.1.0
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+ Summary: MCP server providing tools for PharmaPendium data extraction workflows
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+ Author: ELS-RJED Team
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+ License-Expression: MIT
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+ License-File: LICENSE
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+ Keywords: excel,extraction,mcp,pharmacokinetic,pharmapendium,xlsx
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+ Classifier: Development Status :: 4 - Beta
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+ Classifier: License :: OSI Approved :: MIT License
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+ Classifier: Programming Language :: Python :: 3
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+ Requires-Python: >=3.11
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+ Requires-Dist: mcp>=1.0.0
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+ Requires-Dist: openpyxl>=3.1.5
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+ Requires-Dist: pandas>=2.0.0
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+ Description-Content-Type: text/markdown
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+
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+ # mcp-server-pp
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+
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+ MCP server providing tools for PharmaPendium data extraction workflows.
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+
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+ ## Tools
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+
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+ ### `json_to_xlsx`
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+
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+ Converts a JSON array of objects into an XLSX file. Each object becomes a row; keys become column headers.
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+
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+ **Parameters:**
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+ - `json_data` (required): JSON array string, e.g. `'[{"col1": "val1", "col2": 2}]'`
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+ - `file_name` (optional): Output filename. Defaults to `extraction_results.xlsx`
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+
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+ ## Usage
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+
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+ ### With uvx (no installation needed)
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+
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+ ```bash
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+ uvx mcp-server-pp
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+ ```
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+
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+ ### Install and run
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+
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+ ```bash
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+ pip install mcp-server-pp
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+ mcp-server-pp
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+ ```
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+
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+ ### MCP client config (e.g. Codemie, Claude Desktop)
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+
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+ ```json
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+ {
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+ "mcpServers": {
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+ "pp-tools": {
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+ "command": "uvx",
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+ "args": ["mcp-server-pp"]
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+ }
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+ }
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+ }
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+ ```
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+ # mcp-server-pp
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+
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+ MCP server providing tools for PharmaPendium data extraction workflows.
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+
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+ ## Tools
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+
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+ ### `json_to_xlsx`
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+
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+ Converts a JSON array of objects into an XLSX file. Each object becomes a row; keys become column headers.
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+
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+ **Parameters:**
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+ - `json_data` (required): JSON array string, e.g. `'[{"col1": "val1", "col2": 2}]'`
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+ - `file_name` (optional): Output filename. Defaults to `extraction_results.xlsx`
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+
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+ ## Usage
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+
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+ ### With uvx (no installation needed)
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+
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+ ```bash
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+ uvx mcp-server-pp
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+ ```
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+
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+ ### Install and run
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+
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+ ```bash
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+ pip install mcp-server-pp
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+ mcp-server-pp
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+ ```
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+
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+ ### MCP client config (e.g. Codemie, Claude Desktop)
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+
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+ ```json
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+ {
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+ "mcpServers": {
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+ "pp-tools": {
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+ "command": "uvx",
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+ "args": ["mcp-server-pp"]
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+ }
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+ }
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+ }
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+ ```
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+ [project]
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+ name = "mcp-server-pp"
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+ version = "0.1.0"
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+ description = "MCP server providing tools for PharmaPendium data extraction workflows"
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+ readme = "README.md"
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+ license = "MIT"
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+ requires-python = ">=3.11"
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+ authors = [{ name = "ELS-RJED Team" }]
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+ keywords = ["mcp", "xlsx", "excel", "pharmacokinetic", "extraction", "pharmapendium"]
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+ classifiers = [
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+ "Development Status :: 4 - Beta",
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+ "Programming Language :: Python :: 3",
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+ "License :: OSI Approved :: MIT License",
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+ ]
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+ dependencies = [
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+ "mcp>=1.0.0",
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+ "pandas>=2.0.0",
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+ "openpyxl>=3.1.5",
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+ ]
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+
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+ [project.scripts]
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+ mcp-server-pp = "mcp_server_pp:main"
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+
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+ [build-system]
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+ requires = ["hatchling"]
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+ build-backend = "hatchling.build"
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+
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+ [tool.hatch.build.targets.wheel]
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+ packages = ["src/mcp_server_pp"]
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+ """MCP server providing tools for PharmaPendium data extraction workflows."""
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+
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+ from mcp_server_pp.server import main
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+
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+ __all__ = ["main"]
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+ """Allow running as: python -m mcp_server_pp"""
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+
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+ from mcp_server_pp.server import main
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+
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+ main()
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+ """
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+ MCP server providing tools for PharmaPendium data extraction workflows.
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+
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+ Tools:
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+ - json_to_xlsx: Convert a JSON array into a downloadable XLSX file.
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+
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+ Usage:
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+ uvx mcp-server-pp # install from PyPI and run (stdio)
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+ mcp-server-pp # run directly if installed
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+ python -m mcp_server_pp # run as module
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+ """
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+
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+ import base64
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+ import io
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+ import json
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+
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+ import pandas as pd
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+ from mcp.server import Server
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+ from mcp.server.stdio import stdio_server
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+ from mcp.types import (
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+ BlobResourceContents,
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+ EmbeddedResource,
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+ TextContent,
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+ Tool,
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+ )
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+
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+ server = Server("mcp-server-pp")
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+
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+ XLSX_MIME = "application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"
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+
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+
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+ @server.list_tools()
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+ async def list_tools() -> list[Tool]:
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+ return [
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+ Tool(
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+ name="json_to_xlsx",
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+ description=(
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+ "Convert a JSON array of objects into a downloadable XLSX (Excel) file. "
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+ "Each object becomes a row; keys become column headers. "
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+ "Returns the file as a downloadable attachment."
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+ ),
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+ inputSchema={
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+ "type": "object",
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+ "properties": {
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+ "json_data": {
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+ "type": "string",
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+ "description": (
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+ "A JSON array of objects. "
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+ "Example: '[{\"col1\": \"val1\", \"col2\": 2}, ...]'"
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+ ),
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+ },
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+ "file_name": {
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+ "type": "string",
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+ "description": (
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+ "Output filename (with or without .xlsx extension). "
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+ "Defaults to 'extraction_results'."
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+ ),
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+ "default": "extraction_results",
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+ },
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+ },
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+ "required": ["json_data"],
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+ },
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+ )
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+ ]
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+
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+
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+ @server.call_tool()
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+ async def call_tool(name: str, arguments: dict) -> list:
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+ if name != "json_to_xlsx":
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+ raise ValueError(f"Unknown tool: {name}")
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+
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+ json_str = arguments["json_data"]
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+ file_name = arguments.get("file_name", "extraction_results")
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+ if not file_name.endswith(".xlsx"):
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+ file_name += ".xlsx"
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+
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+ try:
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+ data = json.loads(json_str)
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+ except json.JSONDecodeError as e:
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+ return [TextContent(type="text", text=f"Invalid JSON: {e}")]
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+
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+ if not isinstance(data, list):
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+ return [TextContent(type="text", text="json_data must be a JSON array")]
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+
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+ if len(data) == 0:
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+ return [TextContent(type="text", text="JSON array is empty, nothing to convert")]
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+
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+ df = pd.DataFrame(data)
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+
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+ buf = io.BytesIO()
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+ df.to_excel(buf, index=False, engine="openpyxl")
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+ buf.seek(0)
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+
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+ b64 = base64.standard_b64encode(buf.read()).decode("utf-8")
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+
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+ return [
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+ TextContent(
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+ type="text",
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+ text=f"Created {file_name} with {len(df)} rows and {len(df.columns)} columns.",
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+ ),
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+ EmbeddedResource(
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+ type="resource",
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+ resource=BlobResourceContents(
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+ uri=f"file:///{file_name}",
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+ mimeType=XLSX_MIME,
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+ blob=b64,
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+ ),
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+ ),
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+ ]
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+
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+
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+ def main():
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+ import asyncio
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+
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+ async def _run():
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+ async with stdio_server() as (read_stream, write_stream):
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+ await server.run(
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+ read_stream,
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+ write_stream,
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+ server.create_initialization_options(),
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+ )
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+
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+ asyncio.run(_run())