masster 0.5.25__tar.gz → 0.5.26__tar.gz

{masster-0.5.25 → masster-0.5.26}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: masster
-Version: 0.5.25
+Version: 0.5.26
 Summary: Mass spectrometry data analysis package
 Project-URL: homepage, https://github.com/zamboni-lab/masster
 Project-URL: repository, https://github.com/zamboni-lab/masster
@@ -851,5 +851,10 @@ python -c "from masster import Wizard; wiz = Wizard(source='D:/Data/studies/my_s
 ## License
 GNU Affero General Public License v3
 
+See the [LICENSE](LICENSE) file for details.
+
+### Third-Party Licenses
+This project uses several third-party libraries, including pyOpenMS which is licensed under the BSD 3-Clause License. For complete information about third-party dependencies and their licenses, see [THIRD_PARTY_NOTICES.md](THIRD_PARTY_NOTICES.md).
+
 ## Citation
 If you use Masster in your research, please cite this repository.

{masster-0.5.25 → masster-0.5.26}/README.md

@@ -124,5 +124,10 @@ python -c "from masster import Wizard; wiz = Wizard(source='D:/Data/studies/my_s
 ## License
 GNU Affero General Public License v3
 
+See the [LICENSE](LICENSE) file for details.
+
+### Third-Party Licenses
+This project uses several third-party libraries, including pyOpenMS which is licensed under the BSD 3-Clause License. For complete information about third-party dependencies and their licenses, see [THIRD_PARTY_NOTICES.md](THIRD_PARTY_NOTICES.md).
+
 ## Citation
 If you use Masster in your research, please cite this repository.

masster-0.5.26/THIRD_PARTY_NOTICES.md

@@ -0,0 +1,64 @@
+# Third-Party Licenses and Notices
+
+This project uses third-party libraries and components that are distributed under their own licenses. Below is a list of these dependencies and their respective license information.
+
+---
+
+## pyOpenMS
+
+**License:** BSD 3-Clause License  
+**Copyright:** OpenMS Team  
+**Source:** https://github.com/OpenMS/OpenMS
+
+pyOpenMS is a Python wrapper for OpenMS, a library for mass spectrometry data analysis.
+
+### BSD 3-Clause License
+
+```
+Copyright (c) 2002-2025, The OpenMS Team
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+
+1. Redistributions of source code must retain the above copyright notice,
+   this list of conditions and the following disclaimer.
+
+2. Redistributions in binary form must reproduce the above copyright notice,
+   this list of conditions and the following disclaimer in the documentation
+   and/or other materials provided with the distribution.
+
+3. Neither the name of the copyright holder nor the names of its
+   contributors may be used to endorse or promote products derived from
+   this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+```
+
+---
+
+## Other Dependencies
+
+This project also depends on the following open-source libraries. Please refer to their respective repositories for detailed license information:
+
+- **NumPy** - BSD License
+- **Pandas** - BSD License
+- **SciPy** - BSD License
+- **Matplotlib** - PSF-based License
+- **h5py** - BSD License
+- **Bokeh** - BSD License
+- **Panel** - BSD License
+- **Polars** - MIT License
+- **scikit-learn** - BSD License
+- **and others** - See pyproject.toml for complete dependency list
+
+For the most up-to-date license information for these dependencies, please refer to their official repositories and documentation.

{masster-0.5.25 → masster-0.5.26}/pyproject.toml

@@ -1,7 +1,7 @@
 
 [project]
 name = "masster"
-version = "0.5.25"
+version = "0.5.26"
 description = "Mass spectrometry data analysis package"
 authors = [
     { name = "Zamboni Lab" }

{masster-0.5.25 → masster-0.5.26}/uv.lock

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 [[package]]
@@ -1446,7 +1449,7 @@ wheels = [
 
 [[package]]
 name = "masster"
-version = "0.5.25"
+version = "0.5.26"
 source = { editable = "." }
 dependencies = [
     { name = "alpharaw" },