masster 0.5.15__tar.gz → 0.5.16__tar.gz
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- {masster-0.5.15 → masster-0.5.16}/PKG-INFO +1 -1
- {masster-0.5.15 → masster-0.5.16}/pyproject.toml +1 -1
- {masster-0.5.15 → masster-0.5.16}/src/masster/__init__.py +1 -1
- {masster-0.5.15 → masster-0.5.16}/src/masster/_version.py +1 -1
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/plot.py +3 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/wizard/__init__.py +2 -2
- {masster-0.5.15 → masster-0.5.16}/src/masster/wizard/wizard.py +430 -716
- {masster-0.5.15 → masster-0.5.16}/uv.lock +1 -1
- {masster-0.5.15 → masster-0.5.16}/.github/workflows/publish.yml +0 -0
- {masster-0.5.15 → masster-0.5.16}/.github/workflows/security.yml +0 -0
- {masster-0.5.15 → masster-0.5.16}/.github/workflows/test.yml +0 -0
- {masster-0.5.15 → masster-0.5.16}/.gitignore +0 -0
- {masster-0.5.15 → masster-0.5.16}/.pre-commit-config.yaml +0 -0
- {masster-0.5.15 → masster-0.5.16}/LICENSE +0 -0
- {masster-0.5.15 → masster-0.5.16}/Makefile +0 -0
- {masster-0.5.15 → masster-0.5.16}/README.md +0 -0
- {masster-0.5.15 → masster-0.5.16}/TESTING.md +0 -0
- {masster-0.5.15 → masster-0.5.16}/demo/example_batch_process.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/demo/example_sample_process.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/chromatogram.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/data/dda/20250530_VH_IQX_KW_RP_HSST3_100mm_12min_pos_v4_DDA_OT_C-MiLUT_QC_dil2_01_20250602151849.sample5 +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/data/dda/20250530_VH_IQX_KW_RP_HSST3_100mm_12min_pos_v4_DDA_OT_C-MiLUT_QC_dil3_01_20250602150634.sample5 +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/data/dda/20250530_VH_IQX_KW_RP_HSST3_100mm_12min_pos_v4_MS1_C-MiLUT_C008_v6_r38_01.sample5 +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/data/dda/20250530_VH_IQX_KW_RP_HSST3_100mm_12min_pos_v4_MS1_C-MiLUT_C008_v7_r37_01.sample5 +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/data/dda/20250530_VH_IQX_KW_RP_HSST3_100mm_12min_pos_v4_MS1_C-MiLUT_C017_v5_r99_01.sample5 +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/data/libs/aa.csv +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/data/libs/ccm.csv +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/data/libs/hilic.csv +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/data/libs/urine.csv +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/data/wiff/2025_01_14_VW_7600_LpMx_DBS_CID_2min_TOP15_030msecMS1_005msecReac_CE35_DBS-ON_3.timeseries.data +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/data/wiff/2025_01_14_VW_7600_LpMx_DBS_CID_2min_TOP15_030msecMS1_005msecReac_CE35_DBS-ON_3.wiff +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/data/wiff/2025_01_14_VW_7600_LpMx_DBS_CID_2min_TOP15_030msecMS1_005msecReac_CE35_DBS-ON_3.wiff.scan +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/data/wiff/2025_01_14_VW_7600_LpMx_DBS_CID_2min_TOP15_030msecMS1_005msecReac_CE35_DBS-ON_3.wiff2 +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/lib/__init__.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/lib/lib.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/logger.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/__init__.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/adducts.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/defaults/__init__.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/defaults/find_adducts_def.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/defaults/find_features_def.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/defaults/find_ms2_def.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/defaults/get_spectrum_def.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/defaults/sample_def.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/h5.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/helpers.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/lib.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/load.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/parameters.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/plot.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/processing.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/quant.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/sample.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/sample5_schema.json +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/save.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/sample/sciex.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/spectrum.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/__init__.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/analysis.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/defaults/__init__.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/defaults/align_def.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/defaults/export_def.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/defaults/fill_def.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/defaults/find_consensus_def.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/defaults/find_ms2_def.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/defaults/identify_def.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/defaults/integrate_chrom_def.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/defaults/integrate_def.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/defaults/merge_def.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/defaults/study_def.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/export.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/h5.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/helpers.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/id.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/importers.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/load.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/merge.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/parameters.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/processing.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/save.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/study.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/study/study5_schema.json +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/wizard/README.md +0 -0
- {masster-0.5.15 → masster-0.5.16}/src/masster/wizard/example.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/tests/conftest.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/tests/test_chromatogram.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/tests/test_defaults.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/tests/test_imports.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/tests/test_integration.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/tests/test_logger.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/tests/test_parameters.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/tests/test_sample.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/tests/test_spectrum.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/tests/test_study.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/tests/test_version.py +0 -0
- {masster-0.5.15 → masster-0.5.16}/tox.ini +0 -0
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@@ -22,7 +22,7 @@ from masster.lib import Lib
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from masster.sample.sample import Sample
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from masster.spectrum import Spectrum
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from masster.study.study import Study
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from masster.wizard import Wizard
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from masster.wizard import Wizard
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__all__ = [
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@@ -449,6 +449,9 @@ def plot_alignment(
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rt_current = row_dict["rt"]
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mz = row_dict["mz"]
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inty = row_dict["inty"]
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# Skip if inty is None
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if inty is None:
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continue
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alpha = inty / max_inty
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size = markersize + 2 if sample_idx == 0 else markersize
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generated script for fully automated processing.
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"""
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from .wizard import Wizard, wizard_def,
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from .wizard import Wizard, wizard_def, create_scripts
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__all__ = ["Wizard", "wizard_def", "
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__all__ = ["Wizard", "wizard_def", "create_scripts"]
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