masster 0.3.3__tar.gz → 0.3.4__tar.gz

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  1. {masster-0.3.3 → masster-0.3.4}/PKG-INFO +1 -1
  2. {masster-0.3.3 → masster-0.3.4}/pyproject.toml +1 -1
  3. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/sample.py +2 -2
  4. {masster-0.3.3 → masster-0.3.4}/uv.lock +1 -1
  5. {masster-0.3.3 → masster-0.3.4}/.github/workflows/publish.yml +0 -0
  6. {masster-0.3.3 → masster-0.3.4}/.github/workflows/security.yml +0 -0
  7. {masster-0.3.3 → masster-0.3.4}/.github/workflows/test.yml +0 -0
  8. {masster-0.3.3 → masster-0.3.4}/.gitignore +0 -0
  9. {masster-0.3.3 → masster-0.3.4}/.pre-commit-config.yaml +0 -0
  10. {masster-0.3.3 → masster-0.3.4}/LICENSE +0 -0
  11. {masster-0.3.3 → masster-0.3.4}/Makefile +0 -0
  12. {masster-0.3.3 → masster-0.3.4}/README.md +0 -0
  13. {masster-0.3.3 → masster-0.3.4}/TESTING.md +0 -0
  14. {masster-0.3.3 → masster-0.3.4}/demo/example_batch_process.py +0 -0
  15. {masster-0.3.3 → masster-0.3.4}/demo/example_sample_process.py +0 -0
  16. {masster-0.3.3 → masster-0.3.4}/src/masster/__init__.py +0 -0
  17. {masster-0.3.3 → masster-0.3.4}/src/masster/_version.py +0 -0
  18. {masster-0.3.3 → masster-0.3.4}/src/masster/chromatogram.py +0 -0
  19. {masster-0.3.3 → masster-0.3.4}/src/masster/data/examples/2025_01_14_VW_7600_LpMx_DBS_CID_2min_TOP15_030msecMS1_005msecReac_CE35_DBS-ON_3.featureXML +0 -0
  20. {masster-0.3.3 → masster-0.3.4}/src/masster/data/examples/2025_01_14_VW_7600_LpMx_DBS_CID_2min_TOP15_030msecMS1_005msecReac_CE35_DBS-ON_3.mzML +0 -0
  21. {masster-0.3.3 → masster-0.3.4}/src/masster/data/examples/2025_01_14_VW_7600_LpMx_DBS_CID_2min_TOP15_030msecMS1_005msecReac_CE35_DBS-ON_3.sample5 +0 -0
  22. {masster-0.3.3 → masster-0.3.4}/src/masster/data/examples/2025_01_14_VW_7600_LpMx_DBS_CID_2min_TOP15_030msecMS1_005msecReac_CE35_DBS-ON_3.timeseries.data +0 -0
  23. {masster-0.3.3 → masster-0.3.4}/src/masster/data/examples/2025_01_14_VW_7600_LpMx_DBS_CID_2min_TOP15_030msecMS1_005msecReac_CE35_DBS-ON_3.wiff +0 -0
  24. {masster-0.3.3 → masster-0.3.4}/src/masster/data/examples/2025_01_14_VW_7600_LpMx_DBS_CID_2min_TOP15_030msecMS1_005msecReac_CE35_DBS-ON_3.wiff.scan +0 -0
  25. {masster-0.3.3 → masster-0.3.4}/src/masster/data/examples/2025_01_14_VW_7600_LpMx_DBS_CID_2min_TOP15_030msecMS1_005msecReac_CE35_DBS-ON_3.wiff2 +0 -0
  26. {masster-0.3.3 → masster-0.3.4}/src/masster/logger.py +0 -0
  27. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/__init__.py +0 -0
  28. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/defaults/__init__.py +0 -0
  29. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/defaults/find_adducts_def.py +0 -0
  30. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/defaults/find_features_def.py +0 -0
  31. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/defaults/find_ms2_def.py +0 -0
  32. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/defaults/get_spectrum_def.py +0 -0
  33. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/defaults/sample_def.py +0 -0
  34. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/h5.py +0 -0
  35. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/helpers.py +0 -0
  36. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/lib.py +0 -0
  37. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/load.py +0 -0
  38. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/parameters.py +0 -0
  39. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/plot.py +0 -0
  40. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/processing.py +0 -0
  41. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/quant.py +0 -0
  42. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/sample5_schema.json +0 -0
  43. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/save.py +0 -0
  44. {masster-0.3.3 → masster-0.3.4}/src/masster/sample/sciex.py +0 -0
  45. {masster-0.3.3 → masster-0.3.4}/src/masster/spectrum.py +0 -0
  46. {masster-0.3.3 → masster-0.3.4}/src/masster/study/__init__.py +0 -0
  47. {masster-0.3.3 → masster-0.3.4}/src/masster/study/defaults/__init__.py +0 -0
  48. {masster-0.3.3 → masster-0.3.4}/src/masster/study/defaults/align_def.py +0 -0
  49. {masster-0.3.3 → masster-0.3.4}/src/masster/study/defaults/export_def.py +0 -0
  50. {masster-0.3.3 → masster-0.3.4}/src/masster/study/defaults/fill_chrom_def.py +0 -0
  51. {masster-0.3.3 → masster-0.3.4}/src/masster/study/defaults/fill_def.py +0 -0
  52. {masster-0.3.3 → masster-0.3.4}/src/masster/study/defaults/find_consensus_def.py +0 -0
  53. {masster-0.3.3 → masster-0.3.4}/src/masster/study/defaults/find_ms2_def.py +0 -0
  54. {masster-0.3.3 → masster-0.3.4}/src/masster/study/defaults/integrate_chrom_def.py +0 -0
  55. {masster-0.3.3 → masster-0.3.4}/src/masster/study/defaults/integrate_def.py +0 -0
  56. {masster-0.3.3 → masster-0.3.4}/src/masster/study/defaults/merge_def.py +0 -0
  57. {masster-0.3.3 → masster-0.3.4}/src/masster/study/defaults/study_def.py +0 -0
  58. {masster-0.3.3 → masster-0.3.4}/src/masster/study/export.py +0 -0
  59. {masster-0.3.3 → masster-0.3.4}/src/masster/study/h5.py +0 -0
  60. {masster-0.3.3 → masster-0.3.4}/src/masster/study/helpers.py +0 -0
  61. {masster-0.3.3 → masster-0.3.4}/src/masster/study/helpers_optimized.py +0 -0
  62. {masster-0.3.3 → masster-0.3.4}/src/masster/study/load.py +0 -0
  63. {masster-0.3.3 → masster-0.3.4}/src/masster/study/parameters.py +0 -0
  64. {masster-0.3.3 → masster-0.3.4}/src/masster/study/plot.py +0 -0
  65. {masster-0.3.3 → masster-0.3.4}/src/masster/study/processing.py +0 -0
  66. {masster-0.3.3 → masster-0.3.4}/src/masster/study/save.py +0 -0
  67. {masster-0.3.3 → masster-0.3.4}/src/masster/study/study.py +0 -0
  68. {masster-0.3.3 → masster-0.3.4}/src/masster/study/study5_schema.json +0 -0
  69. {masster-0.3.3 → masster-0.3.4}/tests/conftest.py +0 -0
  70. {masster-0.3.3 → masster-0.3.4}/tests/test_chromatogram.py +0 -0
  71. {masster-0.3.3 → masster-0.3.4}/tests/test_defaults.py +0 -0
  72. {masster-0.3.3 → masster-0.3.4}/tests/test_imports.py +0 -0
  73. {masster-0.3.3 → masster-0.3.4}/tests/test_integration.py +0 -0
  74. {masster-0.3.3 → masster-0.3.4}/tests/test_logger.py +0 -0
  75. {masster-0.3.3 → masster-0.3.4}/tests/test_parameters.py +0 -0
  76. {masster-0.3.3 → masster-0.3.4}/tests/test_sample.py +0 -0
  77. {masster-0.3.3 → masster-0.3.4}/tests/test_spectrum.py +0 -0
  78. {masster-0.3.3 → masster-0.3.4}/tests/test_study.py +0 -0
  79. {masster-0.3.3 → masster-0.3.4}/tests/test_version.py +0 -0
  80. {masster-0.3.3 → masster-0.3.4}/tox.ini +0 -0
{masster-0.3.3 → masster-0.3.4}/PKG-INFO RENAMED
@@ -1,6 +1,6 @@
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  Metadata-Version: 2.4
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  Name: masster
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- Version: 0.3.3
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+ Version: 0.3.4
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  Summary: Mass spectrometry data analysis package
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  Project-URL: homepage, https://github.com/zamboni-lab/masster
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  Project-URL: repository, https://github.com/zamboni-lab/masster
{masster-0.3.3 → masster-0.3.4}/pyproject.toml RENAMED
@@ -1,7 +1,7 @@
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  [project]
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  name = "masster"
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- version = "0.3.3"
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+ version = "0.3.4"
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  description = "Mass spectrometry data analysis package"
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  authors = [
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  { name = "Zamboni Lab" }
{masster-0.3.3 → masster-0.3.4}/src/masster/sample/sample.py RENAMED
@@ -202,9 +202,9 @@ class Sample:
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  find_adducts = find_adducts
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  find_ms2 = find_ms2
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  get_spectrum = get_spectrum
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- filter = filter
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+ filter = features_filter
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  select = select
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- features_filter = features_filter # New function that keeps only specified features
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+ features_filter = filter # New function that keeps only specified features
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  filter_features = filter
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  features_select = select
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  select_features = select
{masster-0.3.3 → masster-0.3.4}/uv.lock RENAMED
@@ -1585,7 +1585,7 @@ wheels = [
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  [[package]]
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  name = "masster"
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- version = "0.3.3"
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+ version = "0.3.4"
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  source = { editable = "." }
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  dependencies = [
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  { name = "alphabase" },
{masster-0.3.3 → masster-0.3.4}/.gitignore RENAMED
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