mascope-tools 2025.8.18__tar.gz
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- mascope_tools-2025.8.18/PKG-INFO +48 -0
- mascope_tools-2025.8.18/README.md +21 -0
- mascope_tools-2025.8.18/pyproject.toml +40 -0
- mascope_tools-2025.8.18/src/mascope_tools/__init__.py +0 -0
- mascope_tools-2025.8.18/src/mascope_tools/alignment/__init__.py +0 -0
- mascope_tools-2025.8.18/src/mascope_tools/alignment/calibration.py +624 -0
- mascope_tools-2025.8.18/src/mascope_tools/alignment/utils.py +414 -0
- mascope_tools-2025.8.18/src/mascope_tools/composition/__init__.py +0 -0
- mascope_tools-2025.8.18/src/mascope_tools/composition/constants.py +40 -0
- mascope_tools-2025.8.18/src/mascope_tools/composition/finder.py +375 -0
- mascope_tools-2025.8.18/src/mascope_tools/composition/heuristic_filter.py +268 -0
- mascope_tools-2025.8.18/src/mascope_tools/composition/models.py +68 -0
- mascope_tools-2025.8.18/src/mascope_tools/composition/utils.py +152 -0
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Metadata-Version: 2.3
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Name: mascope-tools
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Version: 2025.8.18
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Summary: Mascope's public library, containing tools for spectra postprocessing.
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Author: Oskari Kausiala, Konstantin Tumashevich
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Author-email: Oskari Kausiala <oskari.kausiala@karsa.fi>>, Konstantin Tumashevich <konstantin.tumashevich@karsa.fi>>
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License: MIT
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Classifier: Topic :: Scientific/Engineering :: Atmospheric Science
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Classifier: Topic :: Software Development :: Libraries :: Python Modules
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Requires-Dist: isospecpy>=2.2.3
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Requires-Dist: mascope-sdk>=2025.6.30
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Requires-Dist: numpy>=1.26
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Requires-Dist: scipy>=1.16.1
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Requires-Dist: pandas>=2.3.1
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Requires-Dist: polars>=1.31.0
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Requires-Dist: pyarrow>=21.0.0
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Requires-Dist: pyteomics>=4.7.5
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Requires-Dist: tqdm>=4.67.1
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Maintainer: Oskari Kausiala, Konstantin Tumashevich
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Maintainer-email: Oskari Kausiala <oskari.kausiala@karsa.fi>>, Konstantin Tumashevich <konstantin.tumashevich@karsa.fi>>
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Requires-Python: >=3.12
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Project-URL: Bug Tracker, https://github.com/Karsa-Oy/Mascope/issues
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Project-URL: documentation, https://github.com/Karsa-Oy/Mascope
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Project-URL: homepage, https://karsa.fi/
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Project-URL: repository, https://github.com/Karsa-Oy/Mascope
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Description-Content-Type: text/markdown
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# Mascope Tools
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**Mascope Tools** is a Python library providing utilities for data processing, analysis, and visualization, designed to support the Mascope platform and related scientific workflows.
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## Features
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- **Alignment Tools**
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Utilities for calibration and alignment of datasets.
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- [`alignment/calibration.py`](src/mascope_tools/alignment/calibration.py): Calibration routines and helpers.
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- [`alignment/utils.py`](src/mascope_tools/alignment/utils.py): Supporting functions for alignment tasks.
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- **Composition Assignment**
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Tools for chemical composition analysis and filtering.
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- [`composition/constants.py`](src/mascope_tools/composition/constants.py): Domain-specific constants.
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- [`composition/finder.py`](src/mascope_tools/composition/finder.py): Algorithms for finding chemical compositions.
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- [`composition/heuristic_filter.py`](src/mascope_tools/composition/heuristic_filter.py): Heuristic filters for composition candidates.
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- [`composition/models.py`](src/mascope_tools/composition/models.py): Data models for composition analysis.
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- [`composition/utils.py`](src/mascope_tools/composition/utils.py): Utility functions for composition workflows.
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- **Visualization**
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- [`visualization.py`](src/mascope_tools/visualization.py): Functions for data visualization and plotting.
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# Mascope Tools
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**Mascope Tools** is a Python library providing utilities for data processing, analysis, and visualization, designed to support the Mascope platform and related scientific workflows.
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## Features
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- **Alignment Tools**
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Utilities for calibration and alignment of datasets.
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- [`alignment/calibration.py`](src/mascope_tools/alignment/calibration.py): Calibration routines and helpers.
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- [`alignment/utils.py`](src/mascope_tools/alignment/utils.py): Supporting functions for alignment tasks.
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- **Composition Assignment**
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Tools for chemical composition analysis and filtering.
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- [`composition/constants.py`](src/mascope_tools/composition/constants.py): Domain-specific constants.
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- [`composition/finder.py`](src/mascope_tools/composition/finder.py): Algorithms for finding chemical compositions.
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- [`composition/heuristic_filter.py`](src/mascope_tools/composition/heuristic_filter.py): Heuristic filters for composition candidates.
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- [`composition/models.py`](src/mascope_tools/composition/models.py): Data models for composition analysis.
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- [`composition/utils.py`](src/mascope_tools/composition/utils.py): Utility functions for composition workflows.
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- **Visualization**
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- [`visualization.py`](src/mascope_tools/visualization.py): Functions for data visualization and plotting.
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[project]
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name = "mascope_tools"
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version = "2025.08.18"
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description = "Mascope's public library, containing tools for spectra postprocessing."
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classifiers = [
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"Topic :: Scientific/Engineering :: Atmospheric Science",
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"Topic :: Software Development :: Libraries :: Python Modules",
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]
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authors = [
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{ name = "Oskari Kausiala", email = "oskari.kausiala@karsa.fi>" },
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{ name = "Konstantin Tumashevich", email = "konstantin.tumashevich@karsa.fi>" },
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]
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maintainers = [
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{ name = "Oskari Kausiala", email = "oskari.kausiala@karsa.fi>" },
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{ name = "Konstantin Tumashevich", email = "konstantin.tumashevich@karsa.fi>" },
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]
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license.text = "MIT"
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requires-python = ">=3.12"
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readme = "README.md"
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dependencies = [
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"isospecpy>=2.2.3",
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"mascope-sdk>=2025.6.30",
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"numpy>=1.26",
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"scipy>=1.16.1",
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"pandas>=2.3.1",
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"polars>=1.31.0",
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"pyarrow>=21.0.0",
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"pyteomics>=4.7.5",
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"tqdm>=4.67.1",
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]
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[project.urls]
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homepage = "https://karsa.fi/"
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repository = "https://github.com/Karsa-Oy/Mascope"
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documentation = "https://github.com/Karsa-Oy/Mascope"
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"Bug Tracker" = "https://github.com/Karsa-Oy/Mascope/issues"
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[build-system]
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requires = ["uv_build>=0.6,<0.7"]
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build-backend = "uv_build"
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