lx-annotate 0.3.2__tar.gz → 0.3.4__tar.gz

{lx_annotate-0.3.2 → lx_annotate-0.3.4}/PKG-INFO

@@ -1,6 +1,6 @@
 Metadata-Version: 2.4
 Name: lx-annotate
-Version: 0.3.2
+Version: 0.3.4
 Summary: This webapp provides a frontend interface for pseudonymizing and annotating data and applying AI predictions.
 Author-email: Max Hild <maxhild10@gmail.com>, "Thomas J. Lux" <lux_t1@ukw.de>
 Maintainer: Hamza Zahid, Peter Kowalczyk
@@ -31,9 +31,9 @@ Requires-Dist: django-webpack-loader>=0.7.0
 Requires-Dist: django==6.0.3
 Requires-Dist: djangorestframework>=3.12.4
 Requires-Dist: drf-spectacular>=0.28.0
-Requires-Dist: endoreg-db==0.9.6.0
+Requires-Dist: endoreg-db==0.9.6.1
 Requires-Dist: gunicorn>=23.0.0
-Requires-Dist: lx-dtypes==0.1.4
+Requires-Dist: lx-dtypes==0.1.5
 Requires-Dist: mozilla-django-oidc>=4.0.1
 Requires-Dist: mypy>=1.18.2
 Requires-Dist: numpy>=1.21.0

{lx_annotate-0.3.2 → lx_annotate-0.3.4}/lx_annotate/file_watcher.py

@@ -304,7 +304,7 @@ class AutoProcessingHandler(FileSystemEventHandler):
         self.default_model = "image_multilabel_classification_colonoscopy_default"
 
         self.executor = ThreadPoolExecutor(
-            max_workers=2, thread_name_prefix="FileProcessor"
+            max_workers=1, thread_name_prefix="FileProcessor"
         )
         self.pseudonymized_dir = INTAKE_PREANONYMIZED_DIR
 
@@ -431,31 +431,43 @@ class AutoProcessingHandler(FileSystemEventHandler):
         finally:
             self._release_processing_slot(path_key)
 
-    def _wait_for_file_stable(self, path: Path, timeout: int = 30) -> bool:
+    def _wait_for_file_stable(
+        self,
+        path: Path,
+        timeout: int = 900,
+        stable_checks_required: int = 10,
+        interval: float = 2.0,
+    ) -> bool:
         if not path.exists() or should_ignore_file(path):
             return False
 
-        initial_size = -1
+        last_size = -1
         stable_checks = 0
-        for _ in range(timeout):
+        deadline = time.monotonic() + timeout
+
+        while time.monotonic() < deadline:
             try:
                 current_size = path.stat().st_size
-                if current_size == initial_size:
-                    stable_checks += 1
-                    if stable_checks >= 3:
-                        logger.debug("File stable: %s (%s bytes)", path, current_size)
-                        return True
-                else:
-                    stable_checks = 0
-                    initial_size = current_size
-                    logger.debug(
-                        "File still changing: %s (%s bytes)", path, current_size
-                    )
-                time.sleep(1)
-            except (OSError, IOError) as exc:
-                logger.debug("Error checking file size: %s", exc)
-                time.sleep(1)
+            except OSError as exc:
+                logger.debug("Error checking file size for %s: %s", path, exc)
+                time.sleep(interval)
+                continue
+
+            if current_size <= 0:
+                stable_checks = 0
+            elif current_size == last_size:
+                stable_checks += 1
+                if stable_checks >= stable_checks_required:
+                    logger.info("File stable: %s (%s bytes)", path, current_size)
+                    return True
+            else:
+                stable_checks = 0
+                last_size = current_size
+                logger.debug("File still changing: %s (%s bytes)", path, current_size)
+
+            time.sleep(interval)
 
+        logger.warning("Timed out waiting for stable file: %s", path)
         return False
 
     def _process_video(self, video_path: Path) -> None:

{lx_annotate-0.3.2 → lx_annotate-0.3.4}/pyproject.toml

@@ -5,7 +5,7 @@ build-backend = "hatchling.build"
 [project]
 name = "lx-annotate"
 
-version = "0.3.2"
+version = "0.3.4"
 description = "This webapp provides a frontend interface for pseudonymizing and annotating data and applying AI predictions."
 authors = [
     { name = "Max Hild", email = "maxhild10@gmail.com"},
@@ -61,7 +61,7 @@ dependencies = [
     "types-requests>=2.32.4.20250913",
     "black>=25.12.0",
     "mypy>=1.18.2",
-    "endoreg-db==0.9.6.0",
+    "endoreg-db==0.9.6.1",
     "pydantic-settings>=2.12.0",
     "pydantic>=2.12.5",
     "sops>=1.18",
@@ -70,7 +70,7 @@ dependencies = [
     "cryptography>=45.0.0",
     "django-linear-migrations>=2.19.0",
     "build>=1.4.2",
-    "lx-dtypes==0.1.4",
+    "lx-dtypes==0.1.5",
 ]
 
 [tool.pytest.ini_options]
@@ -81,14 +81,6 @@ addopts = [
   "-ra",
 ]
 
-[tool.uv.sources]
-lx-dtypes = { workspace = true }
-
-[tool.uv.workspace]
-members = [
-    "lx-data-models",
-]
-
 [tool.hatch.build]
 include = [
   "/README.md",

{lx_annotate-0.3.2 → lx_annotate-0.3.4}/staticfiles/.vite/manifest.json

@@ -29,6 +29,14 @@
       "Timeline.css"
     ]
   },
+  "_annotationQueue.js": {
+    "file": "annotationQueue.js",
+    "name": "annotationQueue",
+    "imports": [
+      "src/main.ts",
+      "_applicationSettingsApi.js"
+    ]
+  },
   "_applicationSettingsApi.js": {
     "file": "applicationSettingsApi.js",
     "name": "applicationSettingsApi",
@@ -356,6 +364,7 @@
     "isDynamicEntry": true,
     "imports": [
       "src/main.ts",
+      "_annotationQueue.js",
       "_applicationSettingsApi.js"
     ],
     "css": [
@@ -380,7 +389,9 @@
     "src": "src/views/ModelTrainingPage.vue",
     "isDynamicEntry": true,
     "imports": [
-      "src/main.ts"
+      "src/main.ts",
+      "_annotationQueue.js",
+      "_applicationSettingsApi.js"
     ],
     "css": [
       "ModelTrainingPage.css"

{lx_annotate-0.3.2 → lx_annotate-0.3.4}/staticfiles/AnnotationDashboard.css

@@ -1 +1 @@
-.annotation-stats-overview[data-v-f7319b00]{padding:0}.player-card[data-v-f7319b00],.mission-card[data-v-f7319b00]{border:1px solid rgba(45,48,71,.1);box-shadow:0 12px 26px #131e3514;border-radius:12px}.player-kicker[data-v-f7319b00]{font-size:.72rem;text-transform:uppercase;letter-spacing:.08em;color:#596780;font-weight:700}.player-title[data-v-f7319b00]{font-weight:700;color:#2d3047}.achievement-pill[data-v-f7319b00]{background:linear-gradient(135deg,#fff6d6,#ffe9a9);border:1px solid rgba(166,124,0,.25);color:#7a5a00;border-radius:999px;padding:.35rem .75rem;font-weight:700;font-size:.82rem}.achievement-badge[data-v-f7319b00]{border:1px solid rgba(45,48,71,.12);color:#344767;background:linear-gradient(180deg,#fff,#f4f7fc)!important}.mission-card[data-v-f7319b00]{background:linear-gradient(180deg,#fcfdff,#f6faff)}.mission-title[data-v-f7319b00]{font-size:1.03rem;font-weight:700;color:#344767}.bg-gradient-primary[data-v-f7319b00]{background:linear-gradient(135deg,#667eea,#764ba2)}.annotation-type-card[data-v-f7319b00]{cursor:pointer;transition:transform .2s ease,box-shadow .2s ease,border-color .2s ease;border:1px solid rgba(45,48,71,.08);box-shadow:0 10px 24px #131e350f}.annotation-type-card[data-v-f7319b00]:hover{transform:translateY(-2px);box-shadow:0 16px 32px #131e351f;border-color:#2d30472e}.stats-grid[data-v-f7319b00]{display:grid;grid-template-columns:1fr;gap:15px}.stat-item[data-v-f7319b00]{display:flex;align-items:center;padding:10px;border-radius:8px;background:#f8f9fa}.stat-item.pending[data-v-f7319b00]{border-left:4px solid #ffc107}.stat-item.in-progress[data-v-f7319b00]{border-left:4px solid 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0}}@media(max-width:768px){.header-actions[data-v-f68771cc]{flex-direction:column;align-items:stretch}.dashboard-hero[data-v-f68771cc]{padding:.9rem 1rem}.table-responsive[data-v-f68771cc]{font-size:.875rem}}
+.annotation-stats-overview[data-v-7ff85201]{padding:0}.player-card[data-v-7ff85201],.mission-card[data-v-7ff85201]{border:1px solid rgba(45,48,71,.1);box-shadow:0 12px 26px #131e3514;border-radius:12px}.player-kicker[data-v-7ff85201]{font-size:.72rem;text-transform:uppercase;letter-spacing:.08em;color:#596780;font-weight:700}.player-title[data-v-7ff85201]{font-weight:700;color:#2d3047}.achievement-pill[data-v-7ff85201]{background:linear-gradient(135deg,#fff6d6,#ffe9a9);border:1px solid rgba(166,124,0,.25);color:#7a5a00;border-radius:999px;padding:.35rem .75rem;font-weight:700;font-size:.82rem}.achievement-badge[data-v-7ff85201]{border:1px solid 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lx_annotate-0.3.4/staticfiles/AnnotationDashboard2.js

@@ -0,0 +1 @@
+import{d as as,n as Y,S as Z,c as u,y as ss,w as is,o as r,f as c,j as M,g as s,F as V,h as D,k as o,s as h,t as i,H as S,i as ts,_ as es,P as os,b as E,l as j,q as Q,a as A,r as R,e as k,v as ls}from"./main.js";const ds={class:"annotation-stats-overview"},rs={key:0,class:"dashboard-loading-state py-4"},cs={class:"row g-3 mb-3"},us={key:1},vs={class:"row mb-4"},gs={class:"col-12"},ms={class:"card bg-gradient-primary text-white"},ps={class:"card-body"},bs={class:"row align-items-center"},hs={class:"col-4 text-end"},fs=["disabled"],_s={class:"row mb-4 g-3"},ys={class:"col-lg-8"},ks={class:"card player-card h-100"},xs={class:"card-body"},ws={class:"d-flex flex-wrap justify-content-between align-items-start gap-3"},Ss={class:"player-title mb-1"},As={class:"text-muted mb-2"},Ps={class:"achievement-pill"},$s={class:"level-progress mt-3"},Cs={class:"d-flex justify-content-between small text-muted mb-1"},Is={class:"progress",style:{height:"12px"}},Ms={class:"mt-3 d-flex flex-wrap gap-2"},Es={class:"col-lg-4"},Vs={class:"card mission-card h-100"},Ds={class:"card-body"},Ns={class:"mission-title mt-1 mb-2"},Ts={class:"text-muted small mb-3"},Fs={class:"progress mb-2",style:{height:"10px"}},zs={class:"d-flex justify-content-between align-items-center small"},Ls={class:"fw-semibold"},Us={class:"row mb-4"},Bs={class:"col-12"},qs={class:"card"},js={class:"card-body"},Rs={class:"progress-container"},Ks={class:"progress mb-2",style:{height:"30px"}},Os=["aria-valuenow"],Gs={class:"progress-text"},Hs=["aria-valuenow"],Xs={class:"progress-text"},Ws=["aria-valuenow"],Js={class:"progress-text"},Qs={class:"progress-legend d-flex justify-content-between"},Ys={class:"text-muted"},Zs={class:"text-muted"},st={class:"row mb-4"},tt={class:"col-md-4 mb-3"},et={class:"card-header bg-primary text-white"},nt={class:"d-flex justify-content-between align-items-center"},at={class:"badge bg-light text-primary"},it={class:"card-body"},ot={class:"stats-grid"},lt={class:"stat-item 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lx_annotate-0.3.4/staticfiles/FindingsCapturePage.css

@@ -0,0 +1 @@
+.runtime-finding-instance[data-v-c105cd17]{background:#fbfcfe}

lx_annotate-0.3.4/staticfiles/FindingsCapturePage.js

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lx_annotate-0.3.4/staticfiles/FrameAnnotation.css

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lx_annotate-0.3.4/staticfiles/FrameAnnotation.js

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lx_annotate-0.3.4/staticfiles/ModelTrainingPage.css

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lx_annotate-0.3.4/staticfiles/ModelTrainingPage.js

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